RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 HRASP01112 189 aa13.63□□□□□ -0.23
CHD3-214ENST00000572579 GNRHRP30968 328 aa13.63□□□□□ -0.23
CHD3-214ENST00000572579 RPS19P39019 145 aaKnown RBP13.63□□□□□ -0.23
CHD3-214ENST00000572579 FXYD4P59646 89 aa13.63□□□□□ -0.23
CHD3-214ENST00000572579 POU2AF1Q16633 256 aa13.63□□□□□ -0.23
CHD3-214ENST00000572579 KCTD21Q4G0X4 260 aa13.63□□□□□ -0.23
CHD3-214ENST00000572579 GPHB5Q86YW7 130 aa13.63□□□□□ -0.23
CHD3-214ENST00000572579 DEFB125Q8N687 156 aa13.63□□□□□ -0.23
CHD3-214ENST00000572579 OR2K2Q8NGT1 345 aa13.63□□□□□ -0.23
CHD3-214ENST00000572579 WDR89Q96FK6 387 aaPredicted RBP13.63□□□□□ -0.23
CHD3-214ENST00000572579 HIPK2Q9H2X6 1198 aa13.63□□□□□ -0.23
CHD3-214ENST00000572579 ZC4H2Q9NQZ6 224 aa13.63□□□□□ -0.23
CHD3-214ENST00000572579 ANAPC10Q9UM13 185 aa13.63□□□□□ -0.23
CHD3-214ENST00000572579 IGLC7A0M8Q6 106 aa13.62□□□□□ -0.23
CHD3-214ENST00000572579 TMEM213A2RRL7 107 aa13.62□□□□□ -0.23
CHD3-214ENST00000572579 UPK2O00526 184 aa13.62□□□□□ -0.23
CHD3-214ENST00000572579 RBFOX2O43251 390 aaKnown RBP eCLIP13.62□□□□□ -0.23
CHD3-214ENST00000572579 XRCC3O43542 346 aa13.62□□□□□ -0.23
CHD3-214ENST00000572579 RFX2P48378 723 aa13.62□□□□□ -0.23
CHD3-214ENST00000572579 GTSCR1Q86UQ5 136 aa13.62□□□□□ -0.23
CHD3-214ENST00000572579 ZBTB34Q8NCN2 500 aa13.62□□□□□ -0.23
CHD3-214ENST00000572579 OR5AP2Q8NGF4 316 aa13.62□□□□□ -0.23
CHD3-214ENST00000572579 YIPF6Q96EC8 236 aa13.62□□□□□ -0.23
CHD3-214ENST00000572579 NEURL2Q9BR09 285 aa13.62□□□□□ -0.23
CHD3-214ENST00000572579 SPATA25Q9BR10 227 aa13.62□□□□□ -0.23
CHD3-214ENST00000572579 TUBA4BQ9H853 241 aa13.62□□□□□ -0.23
CHD3-214ENST00000572579 RPA2P15927 270 aa13.61□□□□□ -0.23
CHD3-214ENST00000572579 CBLN1P23435 193 aa13.61□□□□□ -0.23
CHD3-214ENST00000572579 CD81P60033 236 aa13.61□□□□□ -0.23
CHD3-214ENST00000572579 DHRS11Q6UWP2 260 aa13.61□□□□□ -0.23
CHD3-214ENST00000572579 UNQ9165/PRO28630Q6UXU0 137 aa13.61□□□□□ -0.23
CHD3-214ENST00000572579 OR10W1Q8NGF6 305 aa13.61□□□□□ -0.23
CHD3-214ENST00000572579 OR4A5Q8NH83 315 aa13.61□□□□□ -0.23
CHD3-214ENST00000572579 DIABLOQ9NR28 239 aa13.61□□□□□ -0.23
CHD3-214ENST00000572579 MLXQ9UH92 298 aa13.61□□□□□ -0.23
CHD3-214ENST00000572579 DPPA5A6NC42 116 aa13.6□□□□□ -0.23
CHD3-214ENST00000572579 S1PR2O95136 353 aa13.6□□□□□ -0.23
CHD3-214ENST00000572579 CLEC3BP05452 202 aa13.6□□□□□ -0.23
CHD3-214ENST00000572579 ARL3P36405 182 aa13.6□□□□□ -0.23
CHD3-214ENST00000572579 TAS2R31P59538 309 aa13.6□□□□□ -0.23
CHD3-214ENST00000572579 TMEM17Q86X19 198 aa13.6□□□□□ -0.23
CHD3-214ENST00000572579 LYSMD2Q8IV50 215 aa13.6□□□□□ -0.23
CHD3-214ENST00000572579 OR51H1Q8NH63 302 aa13.6□□□□□ -0.23
CHD3-214ENST00000572579 HRASLSQ9HDD0 168 aa13.6□□□□□ -0.23
CHD3-214ENST00000572579 LCE6AA0A183 80 aa13.59□□□□□ -0.23
CHD3-214ENST00000572579 HPRT1P00492 218 aa13.59□□□□□ -0.23
CHD3-214ENST00000572579 NAT1P18440 290 aa13.59□□□□□ -0.23
CHD3-214ENST00000572579 LSM3P62310 102 aaKnown RBP13.59□□□□□ -0.23
CHD3-214ENST00000572579 TM4SF20Q53R12 229 aa13.59□□□□□ -0.23
CHD3-214ENST00000572579 LAX1Q8IWV1 398 aa13.59□□□□□ -0.23
CHD3-214ENST00000572579 TMEM61Q8N0U2 210 aa13.59□□□□□ -0.23
CHD3-214ENST00000572579 FAM110AQ9BQ89 295 aa13.59□□□□□ -0.23
CHD3-214ENST00000572579 TMEM140Q9NV12 185 aa13.59□□□□□ -0.23
CHD3-214ENST00000572579 CEPT1Q9Y6K0 416 aa13.59□□□□□ -0.23
CHD3-214ENST00000572579 PGLYRP1O75594 196 aaPredicted RBP13.58□□□□□ -0.24
CHD3-214ENST00000572579 PMP2P02689 132 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 NQO2P16083 231 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 CBX5P45973 191 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 MFAP2P55001 183 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 WT1-ASQ06250 92 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 GUCA2BQ16661 112 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 ZNF585BQ52M93 769 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 FAM209BQ5JX69 171 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 UXS1Q8NBZ7 420 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 ZNF502Q8TBZ5 544 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 DYNLRB2Q8TF09 96 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 EEF1AKMT3Q96AZ1 226 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 ISOC1Q96CN7 298 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 PLEKHA2Q9HB19 425 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 TECRQ9NZ01 308 aaKnown RBP13.58□□□□□ -0.24
CHD3-214ENST00000572579 BIRC6Q9NR09 4857 aa13.58□□□□□ -0.24
CHD3-214ENST00000572579 IGHV3-35A0A0C4DH35 117 aa13.57□□□□□ -0.24
CHD3-214ENST00000572579 TEX50A0A1B0GTY4 177 aa13.57□□□□□ -0.24
CHD3-214ENST00000572579 ZNF320A2RRD8 509 aa13.57□□□□□ -0.24
CHD3-214ENST00000572579 A8MWP6 167 aa13.57□□□□□ -0.24
CHD3-214ENST00000572579 OR11H12B2RN74 326 aa13.57□□□□□ -0.24
CHD3-214ENST00000572579 TPPPO94811 219 aa13.57□□□□□ -0.24
CHD3-214ENST00000572579 TAS2R20P59543 309 aa13.57□□□□□ -0.24
CHD3-214ENST00000572579 AADACL3Q5VUY0 350 aa13.57□□□□□ -0.24
CHD3-214ENST00000572579 MOB3AQ96BX8 217 aa13.57□□□□□ -0.24
CHD3-214ENST00000572579 S100A16Q96FQ6 103 aaKnown RBP13.57□□□□□ -0.24
CHD3-214ENST00000572579 ZNF414Q96IQ9 312 aa13.57□□□□□ -0.24
CHD3-214ENST00000572579 ZNF2Q9BSG1 426 aaPredicted RBP13.57□□□□□ -0.24
CHD3-214ENST00000572579 PALMDQ9NP74 551 aa13.57□□□□□ -0.24
CHD3-214ENST00000572579 EHFQ9NZC4 300 aa13.57□□□□□ -0.24
CHD3-214ENST00000572579 TMEM127O75204 238 aa13.56□□□□□ -0.24
CHD3-214ENST00000572579 C8orf88P0DMB2 117 aa13.56□□□□□ -0.24
CHD3-214ENST00000572579 DEFA4P12838 97 aa13.56□□□□□ -0.24
CHD3-214ENST00000572579 HIST1H1BP16401 226 aaKnown RBP13.56□□□□□ -0.24
CHD3-214ENST00000572579 UBE2NLQ5JXB2 153 aa13.56□□□□□ -0.24
CHD3-214ENST00000572579 SAMD12Q8N8I0 201 aa13.56□□□□□ -0.24
CHD3-214ENST00000572579 FCAMRQ8WWV6 532 aa13.56□□□□□ -0.24
CHD3-214ENST00000572579 SRD5A3Q9H8P0 318 aa13.56□□□□□ -0.24
CHD3-214ENST00000572579 SLC2A8Q9NY64 477 aa13.56□□□□□ -0.24
CHD3-214ENST00000572579 NSG2Q9Y328 171 aa13.56□□□□□ -0.24
CHD3-214ENST00000572579 TRBV7-1A0A0A6YYK4 115 aa13.55□□□□□ -0.24
CHD3-214ENST00000572579 DBX1A6NMT0 343 aa13.55□□□□□ -0.24
CHD3-214ENST00000572579 F8W735 103 aaPredicted RBP13.55□□□□□ -0.24
CHD3-214ENST00000572579 RLN1P04808 185 aa13.55□□□□□ -0.24
CHD3-214ENST00000572579 EIF4EP06730 217 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms