RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 FAM215AQ9Y5M1 114 aa13.45□□□□□ -0.26
RAB40B-206ENST00000571995 PXMP4Q9Y6I8 212 aa13.45□□□□□ -0.26
RAB40B-206ENST00000571995 MORN2Q502X0 79 aa13.45□□□□□ -0.26
RAB40B-206ENST00000571995 FUT9Q9Y231 359 aa13.45□□□□□ -0.26
RAB40B-206ENST00000571995 RNF115Q9Y4L5 304 aa13.45□□□□□ -0.26
RAB40B-206ENST00000571995 A0A0G2JNJ9 132 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 DUXBA0A1W2PPF3 345 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 AP4M1O00189 453 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 GFRA3O60609 400 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 IGKV3-15P01624 115 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 ZNF90Q03938 601 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 KHDC3LQ587J8 217 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 LSM10Q969L4 123 aaKnown RBP13.44□□□□□ -0.26
RAB40B-206ENST00000571995 SLC35E1Q96K37 410 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 DERL1Q9BUN8 251 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 DKK4Q9UBT3 224 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 Q9UFV3 132 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 EXPH5Q8NEV8 1989 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 ERHP84090 104 aaKnown RBP13.44□□□□□ -0.26
RAB40B-206ENST00000571995 LRRC75BQ2VPJ9 315 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 MRGPRGQ86SM5 289 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 TOLLIPQ9H0E2 274 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 PARLQ9H300 379 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 HPRT1P00492 218 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 IGKV1D-33P01593 117 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 IGKV1-33P01594 117 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 ARL14EPLP0DKL9 152 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 OR10J1P30954 320 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 ZNF134P52741 427 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 GAMTQ14353 236 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 TGIF2LXQ8IUE1 241 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 UHRF2Q96PU4 802 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 NPCDR1Q9BY65 106 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 MS4A5Q9H3V2 200 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 RAB9BQ9NP90 201 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 PKD1L2Q7Z442 2459 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 MTORP42345 2549 aa13.44□□□□□ -0.26
RAB40B-206ENST00000571995 C11orf53Q8IXP5 236 aa13.43□□□□□ -0.26
RAB40B-206ENST00000571995 SLC24A4Q8NFF2 622 aa13.43□□□□□ -0.26
RAB40B-206ENST00000571995 RBP4P02753 201 aa13.43□□□□□ -0.26
RAB40B-206ENST00000571995 ERVFC1-1P60608 527 aa13.43□□□□□ -0.26
RAB40B-206ENST00000571995 SUMO1P63165 101 aaKnown RBP13.43□□□□□ -0.26
RAB40B-206ENST00000571995 LOC102723971A0A1B0GUV8 181 aa13.43□□□□□ -0.26
RAB40B-206ENST00000571995 A8MXE2 369 aa13.43□□□□□ -0.26
RAB40B-206ENST00000571995 BATFQ16520 125 aa13.43□□□□□ -0.26
RAB40B-206ENST00000571995 KRTAP27-1Q3LI81 207 aa13.43□□□□□ -0.26
RAB40B-206ENST00000571995 NEIL1Q96FI4 390 aaPredicted RBP13.43□□□□□ -0.26
RAB40B-206ENST00000571995 FAM103A1Q9BTL3 118 aaKnown RBP13.43□□□□□ -0.26
RAB40B-206ENST00000571995 GAR1Q9NY12 217 aaKnown RBP13.43□□□□□ -0.26
RAB40B-206ENST00000571995 CTXND1A0A1B0GTU2 59 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 F6UZH7 168 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 CA2P00918 260 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 IGKV1-16P04430 117 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 TCF15Q12870 199 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 RPEQ96AT9 228 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 FLYWCH2Q96CP2 140 aaKnown RBP13.42□□□□□ -0.26
RAB40B-206ENST00000571995 H0Y8G0 127 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 IGHG3P01860 377 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 DUTP33316 252 aaKnown RBP13.42□□□□□ -0.26
RAB40B-206ENST00000571995 LGALS4P56470 323 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 OR4A47Q6IF82 309 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 IL22RA2Q969J5 263 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 ZNF714Q96N38 554 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 IGHV3OR16-10A0A075B7F0 116 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 SCGB1D1O95968 90 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 LYPD2Q6UXB3 125 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 GP6Q9HCN6 339 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 ZNF835Q9Y2P0 537 aa13.42□□□□□ -0.26
RAB40B-206ENST00000571995 GRNP28799 593 aaKnown RBP13.41□□□□□ -0.26
RAB40B-206ENST00000571995 ERVK11-1P61568 191 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 ZNF726P1Q15940 193 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 SPATA31B1PQ5VZV4 182 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 FAM57AQ8TBR7 257 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 MRPL20Q9BYC9 149 aaKnown RBP13.41□□□□□ -0.26
RAB40B-206ENST00000571995 DPRXA6NFQ7 191 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 FABP1P07148 127 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 ACAA1P09110 424 aaPredicted RBP13.41□□□□□ -0.26
RAB40B-206ENST00000571995 IGFBP2P18065 325 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 RAB7AP51149 207 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 CT45A1Q5HYN5 189 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 SEM1Q6ZVN7 128 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 OR1B1Q8NGR6 318 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 CT45A3Q8NHU0 189 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 SRRM5B3KS81 715 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 PRSS33Q8NF86 280 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 C22orf15Q8WYQ4 148 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 GAL3ST2Q9H3Q3 398 aa13.41□□□□□ -0.26
RAB40B-206ENST00000571995 COX7A2P2O60397 106 aa13.4□□□□□ -0.26
RAB40B-206ENST00000571995 FXYD3Q14802 87 aa13.4□□□□□ -0.26
RAB40B-206ENST00000571995 C19orf35Q6ZS72 473 aa13.4□□□□□ -0.26
RAB40B-206ENST00000571995 C5orf30Q96GV9 206 aa13.4□□□□□ -0.26
RAB40B-206ENST00000571995 EAF1Q96JC9 268 aaPredicted RBP13.4□□□□□ -0.26
RAB40B-206ENST00000571995 SAMD10Q9BYL1 202 aa13.4□□□□□ -0.26
RAB40B-206ENST00000571995 INSIG2Q9Y5U4 225 aa13.4□□□□□ -0.26
RAB40B-206ENST00000571995 RELNP78509 3460 aa13.4□□□□□ -0.26
RAB40B-206ENST00000571995 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.4□□□□□ -0.26
RAB40B-206ENST00000571995 MOSP00540 346 aa13.4□□□□□ -0.26
RAB40B-206ENST00000571995 RANP62826 216 aaKnown RBP13.4□□□□□ -0.26
RAB40B-206ENST00000571995 SERF2P84101 59 aa13.4□□□□□ -0.26
RAB40B-206ENST00000571995 PIP4P1Q86T03 277 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms