RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 ZNF709Q8N972 641 aa16.1■□□□□ 0.17
SPNS2-203ENST00000570979 SLC25A10Q9UBX3 287 aaPredicted RBP16.1■□□□□ 0.17
SPNS2-203ENST00000570979 RPUSD1Q9UJJ7 312 aaKnown RBP16.1■□□□□ 0.17
SPNS2-203ENST00000570979 CADP27708 2225 aa16.09■□□□□ 0.17
SPNS2-203ENST00000570979 A0A1W2PPE3 182 aa16.09■□□□□ 0.17
SPNS2-203ENST00000570979 TMEM178BH3BS89 294 aa16.09■□□□□ 0.17
SPNS2-203ENST00000570979 RUNX1Q01196 453 aa16.09■□□□□ 0.17
SPNS2-203ENST00000570979 LRRC10Q5BKY1 277 aa16.09■□□□□ 0.17
SPNS2-203ENST00000570979 SPSB3Q6PJ21 355 aa16.09■□□□□ 0.17
SPNS2-203ENST00000570979 ARL6IP6Q8N6S5 226 aa16.09■□□□□ 0.17
SPNS2-203ENST00000570979 OR10G4Q8NGN3 311 aa16.09■□□□□ 0.17
SPNS2-203ENST00000570979 TMPRSS2O15393 492 aa16.08■□□□□ 0.17
SPNS2-203ENST00000570979 MPDU1O75352 247 aa16.08■□□□□ 0.17
SPNS2-203ENST00000570979 ATP5IP56385 69 aaPredicted RBP16.08■□□□□ 0.17
SPNS2-203ENST00000570979 PKIAP61925 76 aa16.08■□□□□ 0.17
SPNS2-203ENST00000570979 CT45A1Q5HYN5 189 aa16.08■□□□□ 0.17
SPNS2-203ENST00000570979 C9orf152Q5JTZ5 239 aa16.08■□□□□ 0.17
SPNS2-203ENST00000570979 ZNF506Q5JVG8 444 aa16.08■□□□□ 0.17
SPNS2-203ENST00000570979 OR8G2PQ6IF36 304 aa16.08■□□□□ 0.17
SPNS2-203ENST00000570979 CT45A3Q8NHU0 189 aa16.08■□□□□ 0.17
SPNS2-203ENST00000570979 DDB2Q92466 427 aa16.08■□□□□ 0.17
SPNS2-203ENST00000570979 DYSFO75923 2080 aa16.08■□□□□ 0.16
SPNS2-203ENST00000570979 NDUFB3O43676 98 aa16.08■□□□□ 0.16
SPNS2-203ENST00000570979 NDUFB7P17568 137 aa16.08■□□□□ 0.16
SPNS2-203ENST00000570979 ZNF134P52741 427 aa16.08■□□□□ 0.16
SPNS2-203ENST00000570979 POU2AF1Q16633 256 aa16.08■□□□□ 0.16
SPNS2-203ENST00000570979 RTL8BQ17RB0 113 aa16.08■□□□□ 0.16
SPNS2-203ENST00000570979 VWC2Q2TAL6 325 aa16.08■□□□□ 0.16
SPNS2-203ENST00000570979 FAM201AQ5SY85 155 aa16.08■□□□□ 0.16
SPNS2-203ENST00000570979 SPNS3Q6ZMD2 512 aa16.08■□□□□ 0.16
SPNS2-203ENST00000570979 HAPLN4Q86UW8 402 aa16.08■□□□□ 0.16
SPNS2-203ENST00000570979 TMEM106BQ9NUM4 274 aa16.08■□□□□ 0.16
SPNS2-203ENST00000570979 A0A1W2PPR1 153 aa16.07■□□□□ 0.16
SPNS2-203ENST00000570979 PROP1O75360 226 aa16.07■□□□□ 0.16
SPNS2-203ENST00000570979 RAB11AP62491 216 aa16.07■□□□□ 0.16
SPNS2-203ENST00000570979 ARL16Q0P5N6 197 aa16.07■□□□□ 0.16
SPNS2-203ENST00000570979 FAM53AQ6NSI3 398 aaPredicted RBP16.07■□□□□ 0.16
SPNS2-203ENST00000570979 ADAM5Q6NVV9 412 aa16.07■□□□□ 0.16
SPNS2-203ENST00000570979 SLC25A48Q6ZT89 311 aaKnown RBP16.07■□□□□ 0.16
SPNS2-203ENST00000570979 C8orf31Q8N9H6 132 aa16.07■□□□□ 0.16
SPNS2-203ENST00000570979 ZNF439Q8NDP4 499 aa16.07■□□□□ 0.16
SPNS2-203ENST00000570979 NEU1Q99519 415 aa16.07■□□□□ 0.16
SPNS2-203ENST00000570979 KAAG1Q9UBP8 84 aa16.07■□□□□ 0.16
SPNS2-203ENST00000570979 USF3Q68DE3 2245 aa16.07■□□□□ 0.16
SPNS2-203ENST00000570979 ELOA3CA0A087WX78 387 aaPredicted RBP16.06■□□□□ 0.16
SPNS2-203ENST00000570979 FSTL3O95633 263 aa16.06■□□□□ 0.16
SPNS2-203ENST00000570979 RAB4AP20338 218 aa16.06■□□□□ 0.16
SPNS2-203ENST00000570979 RPL31P62899 125 aaKnown RBP16.06■□□□□ 0.16
SPNS2-203ENST00000570979 LYG1Q8N1E2 194 aa16.06■□□□□ 0.16
SPNS2-203ENST00000570979 FAM216BQ8N7L0 139 aa16.06■□□□□ 0.16
SPNS2-203ENST00000570979 PRDM13Q9H4Q3 707 aa16.06■□□□□ 0.16
SPNS2-203ENST00000570979 GAR1Q9NY12 217 aaKnown RBP16.06■□□□□ 0.16
SPNS2-203ENST00000570979 FKBP11Q9NYL4 201 aa16.06■□□□□ 0.16
SPNS2-203ENST00000570979 SHISA9B4DS77 424 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 SEC14L6B5MCN3 397 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 C9JQL5 133 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 TSTD3H0UI37 97 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 RPL39P5Q59GN2 51 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 PYY3Q5JQD4 70 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 FAM71F2Q6NXP2 309 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 HEPN1Q6WQI6 88 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 PLPPR2Q96GM1 343 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 P2RX4Q99571 388 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 SSX3Q99909 188 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 ENY2Q9NPA8 101 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 RPS10P5Q9NQ39 176 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 KCNIP2Q9NS61 270 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 RPRMQ9NS64 109 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 SAA2-SAA4A0A096LPE2 208 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 UBE2L5PA0A1B0GUS4 154 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 A0A1B0GV90 55 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 C7orf77A4D0Y5 90 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 SAA2P0DJI9 122 aaPredicted RBP16.05■□□□□ 0.16
SPNS2-203ENST00000570979 OR2B8PP59922 312 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 ZNF714Q96N38 554 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 RSG1Q9BU20 258 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 QTRT1Q9BXR0 403 aaKnown RBP16.05■□□□□ 0.16
SPNS2-203ENST00000570979 HEYLQ9NQ87 328 aaPredicted RBP16.05■□□□□ 0.16
SPNS2-203ENST00000570979 SLC39A9Q9NUM3 307 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 TMEM140Q9NV12 185 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 PRNDQ9UKY0 176 aa16.05■□□□□ 0.16
SPNS2-203ENST00000570979 TANC2Q9HCD6 1990 aa16.04■□□□□ 0.16
SPNS2-203ENST00000570979 DSCAMO60469 2012 aa16.04■□□□□ 0.16
SPNS2-203ENST00000570979 PMS2P5A8MQ11 134 aa16.04■□□□□ 0.16
SPNS2-203ENST00000570979 SIAH2O43255 324 aa16.04■□□□□ 0.16
SPNS2-203ENST00000570979 CLDND2Q8NHS1 167 aa16.04■□□□□ 0.16
SPNS2-203ENST00000570979 CISD1Q9NZ45 108 aaKnown RBP16.04■□□□□ 0.16
SPNS2-203ENST00000570979 FOXA2Q9Y261 457 aaPredicted RBP16.04■□□□□ 0.16
SPNS2-203ENST00000570979 ITPR3Q14573 2671 aa16.03■□□□□ 0.16
SPNS2-203ENST00000570979 E7EQL1 145 aa16.03■□□□□ 0.16
SPNS2-203ENST00000570979 M0R036 132 aa16.03■□□□□ 0.16
SPNS2-203ENST00000570979 OR9G9P0C7N8 305 aa16.03■□□□□ 0.16
SPNS2-203ENST00000570979 DDTP30046 118 aa16.03■□□□□ 0.16
SPNS2-203ENST00000570979 RELBQ01201 579 aa16.03■□□□□ 0.16
SPNS2-203ENST00000570979 AWAT1Q58HT5 328 aa16.03■□□□□ 0.16
SPNS2-203ENST00000570979 ZNF383Q8NA42 475 aa16.03■□□□□ 0.16
SPNS2-203ENST00000570979 CCL17Q92583 94 aa16.03■□□□□ 0.16
SPNS2-203ENST00000570979 RHOVQ96L33 236 aa16.03■□□□□ 0.16
SPNS2-203ENST00000570979 ZNF257Q9Y2Q1 563 aa16.03■□□□□ 0.16
SPNS2-203ENST00000570979 DSCAML1Q8TD84 2053 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms