RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 A6NDX4 124 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 DBX1A6NMT0 343 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 TRIM77I1YAP6 450 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 UPK2O00526 184 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 KCNAB3O43448 404 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 TCF21O43680 179 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 MED6O75586 246 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 NXPH3O95157 252 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 IGLV2-23P01705 113 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 HLA-DRB1P01911 266 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 GIPP09681 153 aaPredicted RBP5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 HLA-GP17693 338 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 PVALBP20472 110 aaPredicted RBP5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 MAS1LP35410 378 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 NKX2-1P43699 371 aaPredicted RBP5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 BCAP31P51572 246 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 F2RL1P55085 397 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 HILS1P60008 231 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 PRSS8Q16651 343 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 LRRC37A5PQ49AS3 106 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 NMSQ5H8A3 153 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 XP32Q5T750 250 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 PUSL1Q8N0Z8 303 aaKnown RBP5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 C5orf56Q8N8D9 126 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 ZBTB8BQ8NAP8 495 aaPredicted RBP5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 OR5B3Q8NH48 314 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 GRPEL2Q8TAA5 225 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 TMEM167AQ8TBQ9 72 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 ARPC1AQ92747 370 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 GPR146Q96CH1 333 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 RCC1LQ96I51 464 aaKnown RBP5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 C2orf50Q96LR7 162 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 QTRT1Q9BXR0 403 aaKnown RBP5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 PRDM13Q9H4Q3 707 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 ZNF430Q9H8G1 570 aaPredicted RBP5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 PLEKHA3Q9HB20 300 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 PARP11Q9NR21 331 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 COA4Q9NYJ1 87 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 FOXA2Q9Y261 457 aaPredicted RBP5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 NSG2Q9Y328 171 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 SIGLEC9Q9Y336 463 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 OR51B2Q9Y5P1 312 aa5.25□□□□□ -1.57
CTDNEP1-204ENST00000570484 ITPR2Q14571 2701 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 A0A1W2PN81 502 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 HMX3A6NHT5 357 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 SRRM4A7MD48 611 aaKnown RBP5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 FAM90A26D6RGX4 464 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 CLDN34H7C241 214 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 L7N2F9 121 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 CHST1O43916 411 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 SSSCA1O60232 199 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 GPR137BO60478 399 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 PFDN1O60925 122 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 CCNKO75909 580 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 SIX6O95475 246 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 LY86O95711 162 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 RLN2P04090 185 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 OR9G9P0C7N8 305 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 CHRNA7P36544 502 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 RPL27AP46776 148 aaKnown RBP5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 SPCS3P61009 180 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 RAP2BP61225 183 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 RPL15P61313 204 aaKnown RBP5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 VAMP2P63027 116 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 CD83Q01151 205 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 FGL1Q08830 312 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 FXYD3Q14802 87 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 IZUMO4Q1ZYL8 232 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 HSD17B13Q7Z5P4 300 aaPredicted RBP5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 SLC35E3Q7Z769 313 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 ZNF429Q86V71 674 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 CADM3Q8N126 398 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 FAM71E2Q8N5Q1 922 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 Q8N9W7 124 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 OR11H7Q8NGC8 314 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 OR1L8Q8NGR8 309 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 SRSF12Q8WXF0 261 aaKnown RBP5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 RBMXL1Q96E39 390 aaKnown RBP5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 RITA1Q96K30 269 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 OR10C1Q96KK4 312 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 CIB3Q96Q77 187 aaPredicted RBP5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 FYTTD1Q96QD9 318 aaKnown RBP5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 NMES1Q9C002 83 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 ZNF436Q9C0F3 470 aaPredicted RBP5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 PRSS22Q9GZN4 317 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 HIPK2Q9H2X6 1198 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 TMEM14BQ9NUH8 114 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 ZNF257Q9Y2Q1 563 aa5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 LSM5Q9Y4Y9 91 aaKnown RBP5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 FLNAP21333 2647 aaKnown RBP5.24□□□□□ -1.57
CTDNEP1-204ENST00000570484 TRAV3A0A0B4J244 114 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 A0A1B0GVG6 124 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 ANKRD34BA5PLL1 514 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 MPTX1A8MV57 137 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 CYB5BO43169 146 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 ST8SIA3O43173 380 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 OPN1MWP04001 364 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 RNASE1P07998 156 aaKnown RBP5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 P0C879 139 aa5.23□□□□□ -1.57
CTDNEP1-204ENST00000570484 OPN1MW2P0DN77 364 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms