RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 IGLV11-55A0A075B6I3 123 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 TRAV18A0A075B6X5 111 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 LOC102724200A0A096LPH7 203 aaPredicted RBP6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 IGHV3-21A0A0B4J1V1 117 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 CXorf65A6NEN9 183 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 SLC22A5O76082 557 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 LY6G6CO95867 125 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 DHFRP00374 187 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 HRASP01112 189 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 CRYGCP07315 174 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 CTRB1P17538 263 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 MAS1LP35410 378 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 OR2B8PP59922 312 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 ARPC4P59998 168 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 EWSR1Q01844 656 aaKnown RBP eCLIP6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 MXD1Q05195 221 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 TIMM50Q3ZCQ8 353 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 FAM209BQ5JX69 171 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 CTRB2Q6GPI1 263 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 ZNF773Q6PK81 442 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 ZNF66Q6ZN08 573 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 BEST4Q8NFU0 473 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 OR10W1Q8NGF6 305 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 OR13F1Q8NGS4 319 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 OR5H6Q8NGV6 325 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 SLC5A7Q9GZV3 580 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 RNF167Q9H6Y7 350 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 RHBDL2Q9NX52 303 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 BLOC1S6Q9UL45 172 aa6.43□□□□□ -1.38
CTDNEP1-203ENST00000570385 LYSTQ99698 3801 aa6.42□□□□□ -1.38
CTDNEP1-203ENST00000570385 IGHV3OR16-8A0A075B7F1 116 aa6.42□□□□□ -1.38
CTDNEP1-203ENST00000570385 A0A0J9YWU9 116 aa6.42□□□□□ -1.38
CTDNEP1-203ENST00000570385 IGLC7A0M8Q6 106 aa6.42□□□□□ -1.38
CTDNEP1-203ENST00000570385 MEIS3P1A6NDR6 274 aa6.42□□□□□ -1.38
CTDNEP1-203ENST00000570385 ERICH4A6NGS2 130 aa6.42□□□□□ -1.38
CTDNEP1-203ENST00000570385 A8MWP6 167 aa6.42□□□□□ -1.38
CTDNEP1-203ENST00000570385 SDC2P34741 201 aa6.42□□□□□ -1.38
CTDNEP1-203ENST00000570385 SFXN4Q6P4A7 337 aa6.42□□□□□ -1.38
CTDNEP1-203ENST00000570385 PLET1Q6UQ28 207 aa6.42□□□□□ -1.38
CTDNEP1-203ENST00000570385 RBPMS2Q6ZRY4 209 aaKnown RBP6.42□□□□□ -1.38
CTDNEP1-203ENST00000570385 OR1L6Q8NGR2 347 aa6.42□□□□□ -1.38
CTDNEP1-203ENST00000570385 OR51H1Q8NH63 302 aa6.42□□□□□ -1.38
CTDNEP1-203ENST00000570385 ZNF502Q8TBZ5 544 aa6.42□□□□□ -1.38
CTDNEP1-203ENST00000570385 TRBV7-1A0A0A6YYK4 115 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 OR2T8A6NH00 312 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 UPK2O00526 184 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 ZNF207O43670 478 aaKnown RBP6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 S1PR2O95136 353 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 PPYP01298 95 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 HIST1H1BP16401 226 aaKnown RBP6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 RPL35AP18077 110 aaKnown RBP6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 GALP22466 123 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 FGF9P31371 208 aaPredicted RBP6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 DEFB135Q30KP9 77 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 ANKRD55Q3KP44 614 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 IDNKQ5T6J7 187 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 AADACL3Q5VUY0 350 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 UBE2UQ5VVX9 321 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 TMEM17Q86X19 198 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 HOGA1Q86XE5 327 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 SPARTQ8N0X7 666 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 DMBX1Q8NFW5 382 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 LINC00476Q8WZB0 136 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 SLC25A38Q96DW6 304 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 CXorf58Q96LI9 332 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 C20orf24Q9BUV8 137 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 HINT2Q9BX68 163 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 COMMD5Q9GZQ3 224 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 VCX3BQ9H321 246 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 TMEM140Q9NV12 185 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 BET1LQ9NYM9 111 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 SSR3Q9UNL2 185 aa6.41□□□□□ -1.38
CTDNEP1-203ENST00000570385 LOC100506127A0A0U1RQW1 187 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 SPRY2O43597 315 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 SCGNO76038 276 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 C8orf88P0DMB2 117 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 OR13C7P0DN81 318 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 NQO2P16083 231 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 HSPA13P48723 471 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 CATR1Q13166 79 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 SLC25A24Q6NUK1 477 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 ZNF818PQ6ZRF7 136 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 LYG2Q86SG7 212 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 TPRA1Q86W33 373 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 OR2C3Q8N628 320 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 UBAC2Q8NBM4 344 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 OR4A5Q8NH83 315 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 QTRT1Q9BXR0 403 aaKnown RBP6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 MRPL27Q9P0M9 148 aaKnown RBP6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 NSG2Q9Y328 171 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 UFC1Q9Y3C8 167 aa6.4□□□□□ -1.38
CTDNEP1-203ENST00000570385 IGHV3-49A0A0A0MS15 119 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 TRAV25A0A0B4J276 109 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 TEX50A0A1B0GTY4 177 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 TGOLN2O43493 480 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 HPRT1P00492 218 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 TRAPPC2P0DI81 140 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 TRAPPC2BP0DI82 140 aa6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 PTBP1P26599 531 aaKnown RBP eCLIP6.39□□□□□ -1.39
CTDNEP1-203ENST00000570385 MFAP2P55001 183 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms