RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 DEFA4P12838 97 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 PGAM2P15259 253 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 TAS2R20P59543 309 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 CX3CL1P78423 397 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 DGCR2P98153 550 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 DCTN2Q13561 401 aaKnown RBP3.78□□□□□ -1.8
CNOT1-219ENST00000569882 PMS2P11Q13670 270 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 CDK10Q15131 360 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 PSG5Q15238 335 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 DEFB121Q5J5C9 76 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 IDO2Q6ZQW0 420 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 Q6ZS49 121 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 SSX9Q7RTT3 188 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 HOGA1Q86XE5 327 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 GVQW1Q8N7I0 195 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 LFNGQ8NES3 379 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 NPBQ8NG41 125 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 OR5T1Q8NG75 326 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 OR5AP2Q8NGF4 316 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 OR6F1Q8NGZ6 308 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 OR51H1Q8NH63 302 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 RNASE11Q8TAA1 199 aaKnown RBP3.78□□□□□ -1.8
CNOT1-219ENST00000569882 OSR1Q8TAX0 266 aaPredicted RBP3.78□□□□□ -1.8
CNOT1-219ENST00000569882 C15orf40Q8WUR7 153 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 C4orf3Q8WVX3 66 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 SLC25A46Q96AG3 418 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 SLC25A38Q96DW6 304 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 RBMXL1Q96E39 390 aaKnown RBP3.78□□□□□ -1.8
CNOT1-219ENST00000569882 MS4A10Q96PG2 267 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 FYTTD1Q96QD9 318 aaKnown RBP3.78□□□□□ -1.8
CNOT1-219ENST00000569882 SPIN2AQ99865 258 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 SPIN2BQ9BPZ2 258 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 AGMATQ9BSE5 352 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 ZNF2Q9BSG1 426 aaPredicted RBP3.78□□□□□ -1.8
CNOT1-219ENST00000569882 C6orf62Q9GZU0 229 aaPredicted RBP3.78□□□□□ -1.8
CNOT1-219ENST00000569882 SLA2Q9H6Q3 261 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 AUNIPQ9H7T9 357 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 RBMX2Q9Y388 322 aaKnown RBP3.78□□□□□ -1.8
CNOT1-219ENST00000569882 FBN3Q75N90 2809 aa3.78□□□□□ -1.8
CNOT1-219ENST00000569882 NBEAL1Q6ZS30 2694 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 IGKV1D-8A0A087WSZ0 117 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 SEC14L6B5MCN3 397 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 SULT1C2O00338 296 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 HPGDSO60760 199 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 SAP30O75446 220 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 SNAPC5O75971 98 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 IGHV3-11P01762 117 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 PRB2P02812 416 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-219ENST00000569882 EIF4EP06730 217 aaKnown RBP3.77□□□□□ -1.81
CNOT1-219ENST00000569882 CRYGCP07315 174 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 SAA1P0DJI8 122 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-219ENST00000569882 PTHLHP12272 177 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 ZNF182P17025 639 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-219ENST00000569882 AADACP22760 399 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 HLA-DMAP28067 261 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 HOXD3P31249 432 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-219ENST00000569882 DUTP33316 252 aaKnown RBP3.77□□□□□ -1.81
CNOT1-219ENST00000569882 RCVRNP35243 200 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 HRH1P35367 487 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 CDX1P47902 265 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-219ENST00000569882 RAB9AP51151 201 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 LINC00205P59089 165 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 UBE2KP61086 200 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 ZNF616Q08AN1 781 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 DYRK1AQ13627 763 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 IL18Q14116 193 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 TATDN3Q17R31 274 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 SCGB2B2Q4G0G5 96 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 PDLIM3Q53GG5 364 aaPredicted RBP3.77□□□□□ -1.81
CNOT1-219ENST00000569882 RNASE10Q5GAN6 216 aaKnown RBP3.77□□□□□ -1.81
CNOT1-219ENST00000569882 TCTEX1D4Q5JR98 221 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 C9orf66Q5T8R8 295 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 LPCAT3Q6P1A2 487 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 ZNF562Q6V9R5 426 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 ZNF66Q6ZN08 573 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 Q6ZPA2 131 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 SLC25A42Q86VD7 318 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 MMD2Q8IY49 270 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 SLC38A6Q8IZM9 456 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 SPAG16Q8N0X2 631 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 RNF152Q8N8N0 203 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 TEX45Q8NA69 505 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 OR11H1Q8NG94 326 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 OR1N2Q8NGR9 330 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 CD300LFQ8TDQ1 290 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 CASTOR1Q8WTX7 329 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 RAB2BQ8WUD1 216 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 FCAMRQ8WWV6 532 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 ZNF503Q96F45 646 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 RITA1Q96K30 269 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 UBE2E2Q96LR5 201 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 OR4C12Q96R67 309 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 ELOVL1Q9BW60 279 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 HINT2Q9BX68 163 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 COMMD5Q9GZQ3 224 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 CCL28Q9NRJ3 127 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 PLSCR3Q9NRY6 295 aa3.77□□□□□ -1.81
CNOT1-219ENST00000569882 IGKV1D-13A0A0B4J2D9 117 aa3.76□□□□□ -1.81
CNOT1-219ENST00000569882 A0A1B0GVG6 124 aa3.76□□□□□ -1.81
CNOT1-219ENST00000569882 MSGN1A6NI15 193 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms