RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 ARPC1AQ92747 370 aa12.68□□□□□ -0.38
USB1-215ENST00000569252 LSM10Q969L4 123 aaKnown RBP12.68□□□□□ -0.38
USB1-215ENST00000569252 ZNF702PQ9H963 129 aa12.68□□□□□ -0.38
USB1-215ENST00000569252 CACFD1Q9UGQ2 172 aa12.68□□□□□ -0.38
USB1-215ENST00000569252 SHPKQ9UHJ6 478 aa12.68□□□□□ -0.38
USB1-215ENST00000569252 TMED3Q9Y3Q3 217 aa12.68□□□□□ -0.38
USB1-215ENST00000569252 RNF114Q9Y508 228 aa12.68□□□□□ -0.38
USB1-215ENST00000569252 IGHV7-81A0A0B4J1V7 117 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 CLPSL1A2RUU4 121 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 PJVKQ0ZLH3 352 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 PRR31Q5SQ13 230 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 THOC7Q6I9Y2 204 aaKnown RBP12.67□□□□□ -0.38
USB1-215ENST00000569252 LYZL2Q7Z4W2 148 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 Q8N2B8 174 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 SLC35G3Q8N808 338 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 LRTM2Q8N967 370 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 GRPEL2Q8TAA5 225 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 CHPT1Q8WUD6 406 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 SPIN2AQ99865 258 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 SPIN2BQ9BPZ2 258 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 TPSG1Q9NRR2 321 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.67□□□□□ -0.38
USB1-215ENST00000569252 PRR13Q9NZ81 148 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 OR51B2Q9Y5P1 312 aa12.67□□□□□ -0.38
USB1-215ENST00000569252 FGF2P09038 288 aa12.66□□□□□ -0.38
USB1-215ENST00000569252 HOXB5P09067 269 aa12.66□□□□□ -0.38
USB1-215ENST00000569252 RPL27AP46776 148 aaKnown RBP12.66□□□□□ -0.38
USB1-215ENST00000569252 RELBQ01201 579 aa12.66□□□□□ -0.38
USB1-215ENST00000569252 ANKRD55Q3KP44 614 aa12.66□□□□□ -0.38
USB1-215ENST00000569252 Q6ZS46 218 aa12.66□□□□□ -0.38
USB1-215ENST00000569252 MRPL41Q8IXM3 137 aaKnown RBP12.66□□□□□ -0.38
USB1-215ENST00000569252 C12orf45Q8N5I9 185 aaPredicted RBP12.66□□□□□ -0.38
USB1-215ENST00000569252 MINDY2Q8NBR6 621 aa12.66□□□□□ -0.38
USB1-215ENST00000569252 OR52B4Q8NGK2 314 aa12.66□□□□□ -0.38
USB1-215ENST00000569252 LINC01006Q8NI28 216 aa12.66□□□□□ -0.38
USB1-215ENST00000569252 LHFPL5Q8TAF8 219 aa12.66□□□□□ -0.38
USB1-215ENST00000569252 MITD1Q8WV92 249 aa12.66□□□□□ -0.38
USB1-215ENST00000569252 TMEM68Q96MH6 324 aa12.66□□□□□ -0.38
USB1-215ENST00000569252 FYTTD1Q96QD9 318 aaKnown RBP12.66□□□□□ -0.38
USB1-215ENST00000569252 HSPB9Q9BQS6 159 aa12.66□□□□□ -0.38
USB1-215ENST00000569252 SEC22CQ9BRL7 303 aa12.66□□□□□ -0.38
USB1-215ENST00000569252 NSG2Q9Y328 171 aa12.66□□□□□ -0.38
USB1-215ENST00000569252 MSGN1A6NI15 193 aa12.65□□□□□ -0.38
USB1-215ENST00000569252 SNRPGP15A8MWD9 76 aa12.65□□□□□ -0.38
USB1-215ENST00000569252 IFNA17P01571 189 aa12.65□□□□□ -0.38
USB1-215ENST00000569252 IGKV1-5P01602 117 aa12.65□□□□□ -0.38
USB1-215ENST00000569252 OPN1MWP04001 364 aa12.65□□□□□ -0.38
USB1-215ENST00000569252 OR9G9P0C7N8 305 aa12.65□□□□□ -0.38
USB1-215ENST00000569252 SULT1A3P0DMM9 295 aa12.65□□□□□ -0.38
USB1-215ENST00000569252 SULT1A4P0DMN0 295 aa12.65□□□□□ -0.38
USB1-215ENST00000569252 OPN1MW2P0DN77 364 aa12.65□□□□□ -0.38
USB1-215ENST00000569252 OPN1MW3P0DN78 364 aa12.65□□□□□ -0.38
USB1-215ENST00000569252 SPNP16150 400 aa12.65□□□□□ -0.38
USB1-215ENST00000569252 SRSF4Q08170 494 aaKnown RBP12.65□□□□□ -0.38
USB1-215ENST00000569252 OR1L8Q8NGR8 309 aa12.65□□□□□ -0.38
USB1-215ENST00000569252 SRSF12Q8WXF0 261 aaKnown RBP12.65□□□□□ -0.38
USB1-215ENST00000569252 HINT2Q9BX68 163 aa12.65□□□□□ -0.38
USB1-215ENST00000569252 TRAV3A0A0B4J244 114 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 TRAV41A0A0B4J266 112 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 A0A1B0GU03 582 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 LINC01548A6NM66 108 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 ATP6V0E1O15342 81 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 SSNA1O43805 119 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 IGF1P05019 195 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 IL6RP08887 468 aaPredicted RBP12.64□□□□□ -0.39
USB1-215ENST00000569252 TRAPPC2P0DI81 140 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 TRAPPC2BP0DI82 140 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 MDKP21741 143 aaPredicted RBP12.64□□□□□ -0.39
USB1-215ENST00000569252 OR2B8PP59922 312 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 ECSCRQ19T08 205 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 AKIRIN2Q53H80 203 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 UNQ5815/PRO19632Q6UWF5 114 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 STPG2Q8N412 459 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 OR5B3Q8NH48 314 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 OR1S1Q8NH92 325 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 GPR146Q96CH1 333 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 ZNF747Q9BV97 191 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 ENY2Q9NPA8 101 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 LINC00527Q9UJ94 153 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 WSB1Q9Y6I7 421 aa12.64□□□□□ -0.39
USB1-215ENST00000569252 WNK1Q9H4A3 2382 aa12.63□□□□□ -0.39
USB1-215ENST00000569252 TEX50A0A1B0GTY4 177 aa12.63□□□□□ -0.39
USB1-215ENST00000569252 PSMB11A5LHX3 300 aa12.63□□□□□ -0.39
USB1-215ENST00000569252 C15orf61A6NNL5 157 aa12.63□□□□□ -0.39
USB1-215ENST00000569252 HSPE1P61604 102 aaKnown RBP12.63□□□□□ -0.39
USB1-215ENST00000569252 SMCO1Q147U7 214 aa12.63□□□□□ -0.39
USB1-215ENST00000569252 HSD17B13Q7Z5P4 300 aaPredicted RBP12.63□□□□□ -0.39
USB1-215ENST00000569252 LFNGQ8NES3 379 aa12.63□□□□□ -0.39
USB1-215ENST00000569252 NOL4LQ96MY1 436 aaPredicted RBP12.63□□□□□ -0.39
USB1-215ENST00000569252 FAM103A1Q9BTL3 118 aaKnown RBP12.63□□□□□ -0.39
USB1-215ENST00000569252 QTRT1Q9BXR0 403 aaKnown RBP12.63□□□□□ -0.39
USB1-215ENST00000569252 CACNG5Q9UF02 275 aa12.63□□□□□ -0.39
USB1-215ENST00000569252 FOXA2Q9Y261 457 aaPredicted RBP12.63□□□□□ -0.39
USB1-215ENST00000569252 A0A0B4J293 547 aa12.62□□□□□ -0.39
USB1-215ENST00000569252 C13orf42A0A1B0GVH6 325 aa12.62□□□□□ -0.39
USB1-215ENST00000569252 A0A1W2PN81 502 aa12.62□□□□□ -0.39
USB1-215ENST00000569252 C5orf51A6NDU8 294 aa12.62□□□□□ -0.39
USB1-215ENST00000569252 FAM25EA8MYX2 175 aa12.62□□□□□ -0.39
USB1-215ENST00000569252 CYB5BO43169 146 aa12.62□□□□□ -0.39
USB1-215ENST00000569252 CHRNA7P36544 502 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms