RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 TENM1Q9UKZ4 2725 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 MSGN1A6NI15 193 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 SFT2D2O95562 160 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 HLA-AP01891 365 aaKnown RBP7.17□□□□□ -1.26
CHD9-219ENST00000569225 OPN1MWP04001 364 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 ELANEP08246 267 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 IL6RP08887 468 aaPredicted RBP7.17□□□□□ -1.26
CHD9-219ENST00000569225 OPN1MW2P0DN77 364 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 OPN1MW3P0DN78 364 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 SUPT4H1P63272 117 aaKnown RBP7.17□□□□□ -1.26
CHD9-219ENST00000569225 IFITM3Q01628 133 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 FOXE3Q13461 319 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 PPP1R1AQ13522 171 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 MRGPRG-AS1Q2M3A8 158 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 CXorf66Q5JRM2 361 aaPredicted RBP7.17□□□□□ -1.26
CHD9-219ENST00000569225 TMEM65Q6PI78 240 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 ZNF329Q86UD4 541 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 MRPL41Q8IXM3 137 aaKnown RBP7.17□□□□□ -1.26
CHD9-219ENST00000569225 SELENOHQ8IZQ5 122 aaKnown RBP7.17□□□□□ -1.26
CHD9-219ENST00000569225 LFNGQ8NES3 379 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 OR5M8Q8NGP6 311 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 WIPF2Q8TF74 440 aaPredicted RBP7.17□□□□□ -1.26
CHD9-219ENST00000569225 CITED1Q99966 193 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 FAM103A1Q9BTL3 118 aaKnown RBP7.17□□□□□ -1.26
CHD9-219ENST00000569225 ALX4Q9H161 411 aaPredicted RBP7.17□□□□□ -1.26
CHD9-219ENST00000569225 CACFD1Q9UGQ2 172 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 FLVCR2Q9UPI3 526 aa7.17□□□□□ -1.26
CHD9-219ENST00000569225 A0A0B4J2A0 478 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 DUXBA0A1W2PPF3 345 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 C15orf61A6NNL5 157 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 G3V318 75 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 IGKV1-5P01602 117 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 IGHG4P01861 327 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 H2AFB2P0C5Z0 115 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 OR4E1P0C645 316 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 EGR2P11161 476 aaPredicted RBP7.16□□□□□ -1.26
CHD9-219ENST00000569225 ANXA7P20073 488 aaKnown RBP7.16□□□□□ -1.26
CHD9-219ENST00000569225 SSBP2P81877 361 aaPredicted RBP7.16□□□□□ -1.26
CHD9-219ENST00000569225 CFHR3Q02985 330 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 HSD17B13Q7Z5P4 300 aaPredicted RBP7.16□□□□□ -1.26
CHD9-219ENST00000569225 MINDY2Q8NBR6 621 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 OR1L8Q8NGR8 309 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 OR5B3Q8NH48 314 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 COQ8AQ8NI60 647 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 CASTOR1Q8WTX7 329 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 LSM10Q969L4 123 aaKnown RBP7.16□□□□□ -1.26
CHD9-219ENST00000569225 FYTTD1Q96QD9 318 aaKnown RBP7.16□□□□□ -1.26
CHD9-219ENST00000569225 SRSF8Q9BRL6 282 aaKnown RBP7.16□□□□□ -1.26
CHD9-219ENST00000569225 PDCD10Q9BUL8 212 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 QTRT1Q9BXR0 403 aaKnown RBP7.16□□□□□ -1.26
CHD9-219ENST00000569225 SHPKQ9UHJ6 478 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 FBXO7Q9Y3I1 522 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 OR51B2Q9Y5P1 312 aa7.16□□□□□ -1.26
CHD9-219ENST00000569225 TRAV6A0A075B6T7 132 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 TRAV3A0A0B4J244 114 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 A0A1W2PN81 502 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 TCRBV4S1A1TA0A5B7 111 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 C9orf170A2RU37 121 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 H3BUA1 57 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 TRAPPC2P0DI81 140 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 TRAPPC2BP0DI82 140 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 CD28P10747 220 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 CHRNA7P36544 502 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 OR2B8PP59922 312 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 DHRS2Q13268 280 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 C19orf54Q5BKX5 351 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 C10orf55Q5SWW7 151 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 PLET1Q6UQ28 207 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 LYG2Q86SG7 212 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 SLC35G3Q8N808 338 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 C11orf44Q8N8P7 122 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 LRTM2Q8N967 370 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 TMEM14BQ9NUH8 114 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 ZNF257Q9Y2Q1 563 aa7.15□□□□□ -1.26
CHD9-219ENST00000569225 CYB5BO43169 146 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 DUS4LO95620 317 aaKnown RBP7.15□□□□□ -1.27
CHD9-219ENST00000569225 DHFRP00374 187 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 IGLV1-40P01703 118 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 OR9G9P0C7N8 305 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 P0C879 139 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 PF4V1P10720 104 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 PPIFP30405 207 aaKnown RBP7.15□□□□□ -1.27
CHD9-219ENST00000569225 KRTAP10-3P60369 221 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 DCTN2Q13561 401 aaKnown RBP7.15□□□□□ -1.27
CHD9-219ENST00000569225 KHDC1LQ5JSQ8 128 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 NRARPQ7Z6K4 114 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 ZNF429Q86V71 674 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 NDUFA11Q86Y39 141 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 DUSP18Q8NEJ0 188 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 LHFPL5Q8TAF8 219 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 FAM110DQ8TAY7 271 aaPredicted RBP7.15□□□□□ -1.27
CHD9-219ENST00000569225 HINT2Q9BX68 163 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 SLA2Q9H6Q3 261 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.15□□□□□ -1.27
CHD9-219ENST00000569225 ZNF355PQ9NSJ1 428 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 ZFP57Q9NU63 452 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 NSG2Q9Y328 171 aa7.15□□□□□ -1.27
CHD9-219ENST00000569225 TSSC4Q9Y5U2 329 aaPredicted RBP7.15□□□□□ -1.27
CHD9-219ENST00000569225 TEX50A0A1B0GTY4 177 aa7.14□□□□□ -1.27
CHD9-219ENST00000569225 TEX22C9J3V5 150 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms