RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 OR1N2Q8NGR9 330 aa10□□□□□ -0.81
TSC2-220ENST00000568238 CD300LFQ8TDQ1 290 aa10□□□□□ -0.81
TSC2-220ENST00000568238 OR5B12Q96R08 314 aa10□□□□□ -0.81
TSC2-220ENST00000568238 RTBDNQ9BSG5 229 aaPredicted RBP10□□□□□ -0.81
TSC2-220ENST00000568238 GPR132Q9UNW8 380 aa10□□□□□ -0.81
TSC2-220ENST00000568238 FOXA2Q9Y261 457 aaPredicted RBP10□□□□□ -0.81
TSC2-220ENST00000568238 FBXO7Q9Y3I1 522 aa10□□□□□ -0.81
TSC2-220ENST00000568238 HUWE1Q7Z6Z7 4374 aaKnown RBP9.99□□□□□ -0.81
TSC2-220ENST00000568238 TEX13DA0A0J9YY54 714 aaPredicted RBP9.99□□□□□ -0.81
TSC2-220ENST00000568238 C3orf85A0A1B0GTC6 90 aa9.99□□□□□ -0.81
TSC2-220ENST00000568238 PLA2G10O15496 165 aa9.99□□□□□ -0.81
TSC2-220ENST00000568238 LYRM1O43325 122 aa9.99□□□□□ -0.81
TSC2-220ENST00000568238 UPK1BO75841 260 aa9.99□□□□□ -0.81
TSC2-220ENST00000568238 CA2P00918 260 aa9.99□□□□□ -0.81
TSC2-220ENST00000568238 HRASP01112 189 aa9.99□□□□□ -0.81
TSC2-220ENST00000568238 SERPINE2P07093 398 aa9.99□□□□□ -0.81
TSC2-220ENST00000568238 BTCP35070 178 aa9.99□□□□□ -0.81
TSC2-220ENST00000568238 CX3CL1P78423 397 aa9.99□□□□□ -0.81
TSC2-220ENST00000568238 PJVKQ0ZLH3 352 aa9.99□□□□□ -0.81
TSC2-220ENST00000568238 ASPHD1Q5U4P2 390 aa9.99□□□□□ -0.81
TSC2-220ENST00000568238 SCGB3A2Q96PL1 93 aa9.99□□□□□ -0.81
TSC2-220ENST00000568238 PRR25Q96S07 402 aa9.99□□□□□ -0.81
TSC2-220ENST00000568238 TP53RKQ96S44 253 aa9.99□□□□□ -0.81
TSC2-220ENST00000568238 C7orf50Q9BRJ6 194 aaKnown RBP9.99□□□□□ -0.81
TSC2-220ENST00000568238 H0Y980 276 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 SOX15O60248 233 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 HPRT1P00492 218 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 CRYGBP07316 175 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 AKR1C4P17516 323 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 TAS2R31P59538 309 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 ERVK-16P61578 105 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 TMEM267Q0VDI3 215 aaPredicted RBP9.98□□□□□ -0.81
TSC2-220ENST00000568238 RBMS2Q15434 407 aaKnown RBP9.98□□□□□ -0.81
TSC2-220ENST00000568238 SP6Q3SY56 376 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 ZNF585BQ52M93 769 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 PPP1R27Q86WC6 154 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 DMBX1Q8NFW5 382 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 CASTOR1Q8WTX7 329 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 TMEM230Q96A57 120 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 RHOVQ96L33 236 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 SLC25A21Q9BQT8 299 aaPredicted RBP9.98□□□□□ -0.81
TSC2-220ENST00000568238 NAA60Q9H7X0 242 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 PLEKHA2Q9HB19 425 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 COMMD9Q9P000 198 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 TBC1D24Q9ULP9 559 aa9.98□□□□□ -0.81
TSC2-220ENST00000568238 CRYM-AS1A6NIL9 109 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 OR2A4O95047 310 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 NDUFB6O95139 128 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 LGALS1P09382 135 aaKnown RBP9.97□□□□□ -0.81
TSC2-220ENST00000568238 OR5AC1P0C628 307 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 NQO2P16083 231 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 G6PCP35575 357 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 INSL3P51460 131 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 IFITM3Q01628 133 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 PRSS8Q16651 343 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 TRIM16LQ309B1 348 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 OR4A47Q6IF82 309 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 ZNF562Q6V9R5 426 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 TEX45Q8NA69 505 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 GRPEL2Q8TAA5 225 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 ARPC1AQ92747 370 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 OR2A7Q96R45 310 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 FAM103A1Q9BTL3 118 aaKnown RBP9.97□□□□□ -0.81
TSC2-220ENST00000568238 ALX4Q9H161 411 aaPredicted RBP9.97□□□□□ -0.81
TSC2-220ENST00000568238 ZNF430Q9H8G1 570 aaPredicted RBP9.97□□□□□ -0.81
TSC2-220ENST00000568238 FLVCR2Q9UPI3 526 aa9.97□□□□□ -0.81
TSC2-220ENST00000568238 ZNF256Q9Y2P7 627 aaPredicted RBP9.97□□□□□ -0.81
TSC2-220ENST00000568238 MARCH11A6NNE9 402 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 OVOL1O14753 267 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 KBTBD11O94819 623 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 CNIH1O95406 144 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 KRASP01116 189 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 IGKV1-39P01597 117 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 IGKV1D-39P04432 117 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 EGR2P11161 476 aaPredicted RBP9.96□□□□□ -0.82
TSC2-220ENST00000568238 ASAH1Q13510 395 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 FXYD3Q14802 87 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 TNXAQ16473 311 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 MRGPRG-AS1Q2M3A8 158 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 AKIRIN2Q53H80 203 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 UNQ5815/PRO19632Q6UWF5 114 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 SGPP2Q8IWX5 399 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 PUSL1Q8N0Z8 303 aaKnown RBP9.96□□□□□ -0.82
TSC2-220ENST00000568238 LFNGQ8NES3 379 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 VSTM2AQ8TAG5 236 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 DCUN1D4Q92564 292 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 AIFM2Q9BRQ8 373 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 TMEM140Q9NV12 185 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 PRR13Q9NZ81 148 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 LSM4Q9Y4Z0 139 aaKnown RBP9.96□□□□□ -0.82
TSC2-220ENST00000568238 NUBP2Q9Y5Y2 271 aa9.96□□□□□ -0.82
TSC2-220ENST00000568238 LINC01619G3V211 115 aa9.95□□□□□ -0.82
TSC2-220ENST00000568238 ARPC1BO15143 372 aaKnown RBP9.95□□□□□ -0.82
TSC2-220ENST00000568238 ACTL6BO94805 426 aa9.95□□□□□ -0.82
TSC2-220ENST00000568238 LY86O95711 162 aa9.95□□□□□ -0.82
TSC2-220ENST00000568238 SLURP1P55000 103 aa9.95□□□□□ -0.82
TSC2-220ENST00000568238 TPPP2P59282 170 aa9.95□□□□□ -0.82
TSC2-220ENST00000568238 SSBP2P81877 361 aaPredicted RBP9.95□□□□□ -0.82
TSC2-220ENST00000568238 POU2AF1Q16633 256 aa9.95□□□□□ -0.82
TSC2-220ENST00000568238 C10orf55Q5SWW7 151 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms