RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 DCTN2Q13561 401 aaKnown RBP13.13□□□□□ -0.31
KNOP1-205ENST00000568230 PHLDA2Q53GA4 152 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 RNASE10Q5GAN6 216 aaKnown RBP13.13□□□□□ -0.31
KNOP1-205ENST00000568230 LPCAT3Q6P1A2 487 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 SLC38A6Q8IZM9 456 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 CADM3Q8N126 398 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 NECAP1Q8NC96 275 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 FCAMRQ8WWV6 532 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 ISOC1Q96CN7 298 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 PEF1Q9UBV8 284 aaKnown RBP13.13□□□□□ -0.31
KNOP1-205ENST00000568230 GABARAPH6UMI1 98 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 NOL3O60936 208 aaKnown RBP13.13□□□□□ -0.31
KNOP1-205ENST00000568230 SAP30O75446 220 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 CD3DP04234 171 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 AREGP15514 252 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 S100GP29377 79 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 MRPS10P82664 201 aaKnown RBP13.13□□□□□ -0.31
KNOP1-205ENST00000568230 EXOSC2Q13868 293 aaKnown RBP13.13□□□□□ -0.31
KNOP1-205ENST00000568230 KLK9Q2XQG4 91 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 ZNF585BQ52M93 769 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 C19orf35Q6ZS72 473 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 LHFPL1Q86WI0 220 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 ARRDC1Q8N5I2 433 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 DMBX1Q8NFW5 382 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 FAM212BQ9NTI7 297 aaPredicted RBP13.13□□□□□ -0.31
KNOP1-205ENST00000568230 KLK9Q9UKQ9 250 aa13.13□□□□□ -0.31
KNOP1-205ENST00000568230 ZNF256Q9Y2P7 627 aaPredicted RBP13.13□□□□□ -0.31
KNOP1-205ENST00000568230 DPPA5A6NC42 116 aa13.12□□□□□ -0.31
KNOP1-205ENST00000568230 CD74P04233 296 aa13.12□□□□□ -0.31
KNOP1-205ENST00000568230 CTRB1P17538 263 aa13.12□□□□□ -0.31
KNOP1-205ENST00000568230 PSMB6P28072 239 aa13.12□□□□□ -0.31
KNOP1-205ENST00000568230 LPAR6P43657 344 aa13.12□□□□□ -0.31
KNOP1-205ENST00000568230 ERVK-16P61578 105 aa13.12□□□□□ -0.31
KNOP1-205ENST00000568230 SSBP1Q04837 148 aaKnown RBP13.12□□□□□ -0.31
KNOP1-205ENST00000568230 ATP5G2Q06055 141 aa13.12□□□□□ -0.31
KNOP1-205ENST00000568230 KLF5Q13887 457 aaPredicted RBP13.12□□□□□ -0.31
KNOP1-205ENST00000568230 CTRB2Q6GPI1 263 aa13.12□□□□□ -0.31
KNOP1-205ENST00000568230 PRR25Q96S07 402 aa13.12□□□□□ -0.31
KNOP1-205ENST00000568230 SRSF8Q9BRL6 282 aaKnown RBP13.12□□□□□ -0.31
KNOP1-205ENST00000568230 COMMD5Q9GZQ3 224 aa13.12□□□□□ -0.31
KNOP1-205ENST00000568230 SLIRPQ9GZT3 109 aaKnown RBP13.12□□□□□ -0.31
KNOP1-205ENST00000568230 IGLC7A0M8Q6 106 aa13.11□□□□□ -0.31
KNOP1-205ENST00000568230 OR2J3O76001 311 aa13.11□□□□□ -0.31
KNOP1-205ENST00000568230 IFNA6P05013 189 aa13.11□□□□□ -0.31
KNOP1-205ENST00000568230 C15orf32Q32M92 178 aa13.11□□□□□ -0.31
KNOP1-205ENST00000568230 DEFB121Q5J5C9 76 aa13.11□□□□□ -0.31
KNOP1-205ENST00000568230 TBC1D26Q86UD7 250 aa13.11□□□□□ -0.31
KNOP1-205ENST00000568230 TMEM229BQ8NBD8 167 aa13.11□□□□□ -0.31
KNOP1-205ENST00000568230 SMIM4Q8WVI0 70 aa13.11□□□□□ -0.31
KNOP1-205ENST00000568230 FANCD2OSQ96PS1 177 aa13.11□□□□□ -0.31
KNOP1-205ENST00000568230 QTRT1Q9BXR0 403 aaKnown RBP13.11□□□□□ -0.31
KNOP1-205ENST00000568230 STAB2Q8WWQ8 2551 aa13.1□□□□□ -0.31
KNOP1-205ENST00000568230 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.1□□□□□ -0.31
KNOP1-205ENST00000568230 DHFRP00374 187 aa13.1□□□□□ -0.31
KNOP1-205ENST00000568230 KRASP01116 189 aa13.1□□□□□ -0.31
KNOP1-205ENST00000568230 RPA2P15927 270 aa13.1□□□□□ -0.31
KNOP1-205ENST00000568230 TAS2R19P59542 299 aa13.1□□□□□ -0.31
KNOP1-205ENST00000568230 FAM209BQ5JX69 171 aa13.1□□□□□ -0.31
KNOP1-205ENST00000568230 THOC7Q6I9Y2 204 aaKnown RBP13.1□□□□□ -0.31
KNOP1-205ENST00000568230 OR4D10Q8NGI6 311 aa13.1□□□□□ -0.31
KNOP1-205ENST00000568230 OR6Q1Q8NGQ2 317 aa13.1□□□□□ -0.31
KNOP1-205ENST00000568230 ZNF486Q96H40 463 aaPredicted RBP13.1□□□□□ -0.31
KNOP1-205ENST00000568230 DIRAS2Q96HU8 199 aa13.1□□□□□ -0.31
KNOP1-205ENST00000568230 OR4C12Q96R67 309 aa13.1□□□□□ -0.31
KNOP1-205ENST00000568230 ELOVL1Q9BW60 279 aa13.1□□□□□ -0.31
KNOP1-205ENST00000568230 RABL2AQ9UBK7 228 aaPredicted RBP13.1□□□□□ -0.31
KNOP1-205ENST00000568230 RABL2BQ9UNT1 228 aa13.1□□□□□ -0.31
KNOP1-205ENST00000568230 LSM4Q9Y4Z0 139 aaKnown RBP13.1□□□□□ -0.31
KNOP1-205ENST00000568230 CEPT1Q9Y6K0 416 aa13.1□□□□□ -0.31
KNOP1-205ENST00000568230 IGLV11-55A0A075B6I3 123 aa13.09□□□□□ -0.31
KNOP1-205ENST00000568230 BMPR1BO00238 502 aa13.09□□□□□ -0.31
KNOP1-205ENST00000568230 CTDSPLO15194 276 aa13.09□□□□□ -0.31
KNOP1-205ENST00000568230 PTBP1P26599 531 aaKnown RBP eCLIP13.09□□□□□ -0.31
KNOP1-205ENST00000568230 SYNJ2BPP57105 145 aa13.09□□□□□ -0.31
KNOP1-205ENST00000568230 RND3P61587 244 aa13.09□□□□□ -0.31
KNOP1-205ENST00000568230 OR9G4Q8NGQ1 327 aa13.09□□□□□ -0.31
KNOP1-205ENST00000568230 B9D2Q9BPU9 175 aa13.09□□□□□ -0.31
KNOP1-205ENST00000568230 C6orf62Q9GZU0 229 aaPredicted RBP13.09□□□□□ -0.31
KNOP1-205ENST00000568230 NXF2Q9GZY0 626 aaKnown RBP13.09□□□□□ -0.31
KNOP1-205ENST00000568230 FBXL7Q9UJT9 491 aa13.09□□□□□ -0.31
KNOP1-205ENST00000568230 HUWE1Q7Z6Z7 4374 aaKnown RBP13.08□□□□□ -0.32
KNOP1-205ENST00000568230 RAB3DO95716 219 aa13.08□□□□□ -0.32
KNOP1-205ENST00000568230 REG1AP05451 166 aa13.08□□□□□ -0.32
KNOP1-205ENST00000568230 HIST1H1BP16401 226 aaKnown RBP13.08□□□□□ -0.32
KNOP1-205ENST00000568230 G6PCP35575 357 aa13.08□□□□□ -0.32
KNOP1-205ENST00000568230 RPEL1Q2QD12 228 aa13.08□□□□□ -0.32
KNOP1-205ENST00000568230 STEAP1BQ6NZ63 245 aa13.08□□□□□ -0.32
KNOP1-205ENST00000568230 IL34Q6ZMJ4 242 aa13.08□□□□□ -0.32
KNOP1-205ENST00000568230 TEX50A0A1B0GTY4 177 aa13.07□□□□□ -0.32
KNOP1-205ENST00000568230 NDUFB8O95169 186 aa13.07□□□□□ -0.32
KNOP1-205ENST00000568230 IGKV1-39P01597 117 aa13.07□□□□□ -0.32
KNOP1-205ENST00000568230 IGLV1-51P01701 117 aa13.07□□□□□ -0.32
KNOP1-205ENST00000568230 IGKV1D-39P04432 117 aa13.07□□□□□ -0.32
KNOP1-205ENST00000568230 DEFA4P12838 97 aa13.07□□□□□ -0.32
KNOP1-205ENST00000568230 PGAM2P15259 253 aa13.07□□□□□ -0.32
KNOP1-205ENST00000568230 SPNP16150 400 aa13.07□□□□□ -0.32
KNOP1-205ENST00000568230 PPP5CP53041 499 aa13.07□□□□□ -0.32
KNOP1-205ENST00000568230 IL18Q14116 193 aa13.07□□□□□ -0.32
KNOP1-205ENST00000568230 HSD17B13Q7Z5P4 300 aaPredicted RBP13.07□□□□□ -0.32
KNOP1-205ENST00000568230 OR10W1Q8NGF6 305 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms