RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 MARCH11A6NNE9 402 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 H3BUA1 57 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 UPK2O00526 184 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 MPPED1O15442 326 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 FGF2P09038 288 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 PGAM2P15259 253 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 RPA2P15927 270 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 HLA-GP17693 338 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 PTBP1P26599 531 aaKnown RBP eCLIP7.59□□□□□ -1.19
CLK3-220ENST00000567992 MAS1LP35410 378 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 LPAR6P43657 344 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 PIGPP57054 158 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 RPL8P62917 257 aaKnown RBP7.59□□□□□ -1.19
CLK3-220ENST00000567992 DEFA5Q01523 94 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 BEAN1Q3B7T3 259 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 SCGB2B2Q4G0G5 96 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 KPRPQ5T749 579 aaPredicted RBP7.59□□□□□ -1.19
CLK3-220ENST00000567992 TMEM65Q6PI78 240 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 C19orf35Q6ZS72 473 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 C1QL4Q86Z23 238 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 CADM3Q8N126 398 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 Q8N402 240 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 MARCH1Q8TCQ1 289 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 MS4A10Q96PG2 267 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 NEURL2Q9BR09 285 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 CCDC32Q9BV29 185 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 SRRQ9GZT4 340 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 ALX4Q9H161 411 aaPredicted RBP7.59□□□□□ -1.19
CLK3-220ENST00000567992 C5orf66Q9H5L9 145 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 SLA2Q9H6Q3 261 aa7.59□□□□□ -1.19
CLK3-220ENST00000567992 HMX3A6NHT5 357 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 DISC1C4P0D8 188 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 H0Y980 276 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 CCL24O00175 119 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 PTTG1O95997 202 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 TRGV3P03979 118 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 CTSDP07339 412 aaPredicted RBP7.58□□□□□ -1.2
CLK3-220ENST00000567992 LGALS1P09382 135 aaKnown RBP7.58□□□□□ -1.2
CLK3-220ENST00000567992 OR9G9P0C7N8 305 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 P0C879 139 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 IGLL1P15814 213 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 G6PCP35575 357 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 RPL27AP46776 148 aaKnown RBP7.58□□□□□ -1.2
CLK3-220ENST00000567992 TPPP2P59282 170 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 OR2B8PP59922 312 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 SURF2Q15527 256 aaPredicted RBP7.58□□□□□ -1.2
CLK3-220ENST00000567992 PYDC2Q56P42 97 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 OXLD1Q5BKU9 147 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 TTC9CQ8N5M4 171 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 DMBX1Q8NFW5 382 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 OR51S1Q8NGJ8 323 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 SEC22AQ96IW7 307 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 OR5B12Q96R08 314 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 TP53RKQ96S44 253 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 PHB2Q99623 299 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 SDHCQ99643 169 aaPredicted RBP7.58□□□□□ -1.2
CLK3-220ENST00000567992 SPIN2AQ99865 258 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 PRRT1Q99946 306 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 SPIN2BQ9BPZ2 258 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 AIFM2Q9BRQ8 373 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 RTBDNQ9BSG5 229 aaPredicted RBP7.58□□□□□ -1.2
CLK3-220ENST00000567992 HRASLSQ9HDD0 168 aa7.58□□□□□ -1.2
CLK3-220ENST00000567992 TRBV9A0A0B4J1U6 114 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 DBX1A6NMT0 343 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 NPIPB5A8MRT5 1133 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 ACTL6BO94805 426 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 KRASP01116 189 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 IGHV3-11P01762 117 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 PRH1P02810 166 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 CRYGCP07315 174 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 AREGP15514 252 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 CD33P20138 364 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 S100GP29377 79 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 ECI1P42126 302 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 DEFA1P59665 94 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 DEFA3P59666 94 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 KLK9Q2XQG4 91 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 SPANXN2Q5MJ10 180 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 OR11H1Q8NG94 326 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 CHAC2Q8WUX2 184 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 TMEM230Q96A57 120 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 FYTTD1Q96QD9 318 aaKnown RBP7.57□□□□□ -1.2
CLK3-220ENST00000567992 COA4Q9NYJ1 87 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 KLK9Q9UKQ9 250 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 GPR132Q9UNW8 380 aa7.57□□□□□ -1.2
CLK3-220ENST00000567992 IGHV4OR15-8A0A075B7B6 117 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 A0A087WW49 117 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 C3orf85A0A1B0GTC6 90 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 IGLC7A0M8Q6 106 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 BOLA2-SMG1P6H3BVE0 249 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 IGKV1-5P01602 117 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 CTRB1P17538 263 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 UCP1P25874 307 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 PSMB6P28072 239 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 ERVK-16P61578 105 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 BAK1Q16611 211 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 CTRB2Q6GPI1 263 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 GDPD1Q8N9F7 314 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 CCDC71LQ8N9Z2 235 aa7.56□□□□□ -1.2
CLK3-220ENST00000567992 OR1N2Q8NGR9 330 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms