RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 CLINT1Q14677 625 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 NDUFA5Q16718 116 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 TMEM30BQ3MIR4 351 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 HCP5Q6MZN7 132 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 COMMD7Q86VX2 200 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 BAP18Q8IXM2 172 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 PNKDQ8N490 385 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 TCTEX1D1Q8N7M0 179 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 OR8B3Q8NGG8 313 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 FAM216AQ8WUB2 273 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 LINC00476Q8WZB0 136 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 RAB1CQ92928 201 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 RITA1Q96K30 269 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 OR4C12Q96R67 309 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 OR8B2Q96RD0 313 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 S1PR3Q99500 378 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 NABP2Q9BQ15 211 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 MS4A7Q9GZW8 240 aaPredicted RBP4.62□□□□□ -1.67
SF3B3-210ENST00000567654 ARV1Q9H2C2 271 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 TMEM133Q9H2Q1 129 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 RAB9BQ9NP90 201 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 ZC4H2Q9NQZ6 224 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 SIRT7Q9NRC8 400 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 SLC35D1Q9NTN3 355 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 COA4Q9NYJ1 87 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 HSPB7Q9UBY9 170 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 MIOXQ9UGB7 285 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 SESN1Q9Y6P5 492 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 ANK3Q12955 4377 aaKnown RBP4.62□□□□□ -1.67
SF3B3-210ENST00000567654 CELSR2Q9HCU4 2923 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 AKAP9Q99996 3911 aa4.62□□□□□ -1.67
SF3B3-210ENST00000567654 SPTAN1Q13813 2472 aaKnown RBP4.62□□□□□ -1.67
SF3B3-210ENST00000567654 ANKRD17O75179 2603 aaKnown RBP4.61□□□□□ -1.67
SF3B3-210ENST00000567654 A0A087WWL8 130 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 IGHV3-72A0A0B4J1Y9 119 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 FAM90A26D6RGX4 464 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 H0YJW9 148 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 RBFOX2O43251 390 aaKnown RBP eCLIP4.61□□□□□ -1.67
SF3B3-210ENST00000567654 FGF16O43320 207 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 IGLV1-47P01700 117 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 IGHV2-5P01817 119 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 GAPDHP04406 335 aaKnown RBP4.61□□□□□ -1.67
SF3B3-210ENST00000567654 IL6RP08887 468 aaPredicted RBP4.61□□□□□ -1.67
SF3B3-210ENST00000567654 METTL15P1P0C7V9 234 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 RRASP10301 218 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 MMP9P14780 707 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 KIR2DS2P43631 304 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 EFNA4P52798 201 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 UBE2KP61086 200 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 ARF6P62330 175 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 RUNX1Q01196 453 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 PAX2Q02962 417 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 AANATQ16613 207 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 POU2AF1Q16633 256 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 MRGPRG-AS1Q2M3A8 158 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 HLA-DRB5Q30154 266 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 AARDQ4LEZ3 155 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 GPR157Q5UAW9 335 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 OR4A47Q6IF82 309 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 TMEM14EPQ6UXP3 125 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 H2BFWTQ7Z2G1 175 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 ABHD12Q8N2K0 398 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 TMEM217Q8N7C4 229 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 C8orf31Q8N9H6 132 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 OR4P4Q8NGL7 312 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 OR5C1Q8NGR4 320 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 OR4S2Q8NH73 311 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 OR9G1Q8NH87 305 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 CLDND2Q8NHS1 167 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 TMEM170AQ8WVE7 144 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 TIMD4Q96H15 378 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 SMIM8Q96KF7 97 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 GINS3Q9BRX5 216 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 BPESC1Q9GZL8 116 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 ZFP57Q9NU63 452 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 PSENENQ9NZ42 101 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 ONECUT1Q9UBC0 465 aa4.61□□□□□ -1.67
SF3B3-210ENST00000567654 KLF2Q9Y5W3 355 aaPredicted RBP4.61□□□□□ -1.67
SF3B3-210ENST00000567654 MYO18BQ8IUG5 2567 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.6□□□□□ -1.673e-11■■■■■ 42.3
SF3B3-210ENST00000567654 A0A1W2PPI3 338 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 A0A1W2PRD5 423 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 A0A1W2PRF3 423 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 A0A1W2PRM7 423 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 CGB1A6NKQ9 187 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 C15orf61A6NNL5 157 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 C15orf62A8K5M9 175 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 FAM157AC9JC47 383 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 E7EUB6 86 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 LY6LH3BQJ8 138 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 TAAR5O14804 337 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 IGLV2-23P01705 113 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 ARG1P05089 322 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 LIPFP07098 398 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 SAA1P0DJI8 122 aaPredicted RBP4.6□□□□□ -1.67
SF3B3-210ENST00000567654 NQO2P16083 231 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 PVALBP20472 110 aaPredicted RBP4.6□□□□□ -1.67
SF3B3-210ENST00000567654 CNTFRP26992 372 aa4.6□□□□□ -1.67
SF3B3-210ENST00000567654 VDAC2P45880 294 aaPredicted RBP4.6□□□□□ -1.67
SF3B3-210ENST00000567654 KRTAP10-9P60411 292 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms