RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 ELOVL1Q9BW60 279 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 SLC5A7Q9GZV3 580 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 IFT46Q9NQC8 304 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 CCL28Q9NRJ3 127 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 COMMD3Q9UBI1 195 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 ADAM30Q9UKF2 790 aa5.32□□□□□ -1.56
SF3B3-209ENST00000567635 LINC00854A0A1B0GVQ3 168 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 MEIS3P1A6NDR6 274 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 FABP12A6NFH5 140 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 HPGDSO60760 199 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 B3GALNT1O75752 331 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 UPK1BO75841 260 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 PPYP01298 95 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 FCER2P06734 321 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 SAA1P0DJI8 122 aaPredicted RBP5.31□□□□□ -1.56
SF3B3-209ENST00000567635 SPNP16150 400 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 PRSS3P35030 304 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 MAS1LP35410 378 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 KIR2DS2P43631 304 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 BRWD1-AS2P59051 145 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 S100A12P80511 92 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 ATP5G2Q06055 141 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 KLF5Q13887 457 aaPredicted RBP5.31□□□□□ -1.56
SF3B3-209ENST00000567635 TATDN3Q17R31 274 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 DHRS11Q6UWP2 260 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 ZNF767PQ75MW2 155 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 SLC25A42Q86VD7 318 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 PUSL1Q8N0Z8 303 aaKnown RBP5.31□□□□□ -1.56
SF3B3-209ENST00000567635 TTC9CQ8N5M4 171 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 GDPD1Q8N9F7 314 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 VSTM2AQ8TAG5 236 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 TMEM167AQ8TBQ9 72 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 LRRC20Q8TCA0 184 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 SNAPC3Q92966 411 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 DIRAS2Q96HU8 199 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 GPHA2Q96T91 129 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 CCDC32Q9BV29 185 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 ZFAND3Q9H8U3 227 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 TAS2R8Q9NYW2 309 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 PEF1Q9UBV8 284 aaKnown RBP5.31□□□□□ -1.56
SF3B3-209ENST00000567635 DNAH3Q8TD57 4116 aa5.31□□□□□ -1.56
SF3B3-209ENST00000567635 TRBV9A0A0B4J1U6 114 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 FAM223BA6NKX1 122 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 SULT1C2O00338 296 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 TNFSF12O43508 249 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 KBTBD11O94819 623 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 ELK1P19419 428 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 GNRHRP30968 328 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 RFX2P48378 723 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 TAS2R20P59543 309 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 FXYD4P59646 89 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 RHOGP84095 191 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 DEFA5Q01523 94 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 IFITM3Q01628 133 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 DYRK1AQ13627 763 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 TMEM69Q5SWH9 247 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 C11orf87Q6NUJ2 197 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 FAM223AQ8IWN6 122 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 LAX1Q8IWV1 398 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 SPAG16Q8N0X2 631 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 LINC00528Q8N1L1 170 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 NECAP1Q8NC96 275 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 OR4A5Q8NH83 315 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 LHFPL5Q8TAF8 219 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 CD300LFQ8TDQ1 290 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 FYTTD1Q96QD9 318 aaKnown RBP5.3□□□□□ -1.56
SF3B3-209ENST00000567635 SDHCQ99643 169 aaPredicted RBP5.3□□□□□ -1.56
SF3B3-209ENST00000567635 SCPEP1Q9HB40 452 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 ZC4H2Q9NQZ6 224 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 SLC2A9Q9NRM0 540 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 EHFQ9NZC4 300 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 SMAD5-AS1Q9Y6J3 95 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 V9GYH0 126 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 TENM3Q9P273 2699 aa5.3□□□□□ -1.56
SF3B3-209ENST00000567635 HMX3A6NHT5 357 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 TEX22C9J3V5 150 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 RBFOX2O43251 390 aaKnown RBP eCLIP5.29□□□□□ -1.56
SF3B3-209ENST00000567635 RBMXL2O75526 392 aaKnown RBP5.29□□□□□ -1.56
SF3B3-209ENST00000567635 HPRT1P00492 218 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 IGLV1-51P01701 117 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 TRBV12-3P01733 135 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 PMP2P02689 132 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 PRH1P02810 166 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 S100A6P06703 90 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 EIF4EP06730 217 aaKnown RBP5.29□□□□□ -1.56
SF3B3-209ENST00000567635 IL6RP08887 468 aaPredicted RBP5.29□□□□□ -1.56
SF3B3-209ENST00000567635 ZNF735P0CB33 412 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 GP9P14770 177 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 RPL27AP46776 148 aaKnown RBP5.29□□□□□ -1.56
SF3B3-209ENST00000567635 NKX2-5P52952 324 aaPredicted RBP5.29□□□□□ -1.56
SF3B3-209ENST00000567635 SYNJ2BPP57105 145 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 TAS2R46P59540 309 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 HERV-K104P61576 105 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 RPL8P62917 257 aaKnown RBP5.29□□□□□ -1.56
SF3B3-209ENST00000567635 CATR1Q13166 79 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 ZNF79Q15937 498 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 RPEL1Q2QD12 228 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 FAM209BQ5JX69 171 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 C10orf55Q5SWW7 151 aa5.29□□□□□ -1.56
SF3B3-209ENST00000567635 OR4A47Q6IF82 309 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms