RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 VAMP1P23763 118 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 PPIFP30405 207 aaKnown RBP6.4□□□□□ -1.38
CDH13-208ENST00000566333 AKR1C2P52895 323 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 DEFA1P59665 94 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 DEFA3P59666 94 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 OR2B8PP59922 312 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 ERVK-16P61578 105 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 RPL8P62917 257 aaKnown RBP6.4□□□□□ -1.38
CDH13-208ENST00000566333 TNXAQ16473 311 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 ECSCRQ19T08 205 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 ARSJQ5FYB0 599 aaPredicted RBP6.4□□□□□ -1.38
CDH13-208ENST00000566333 TMEM268Q5VZI3 342 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 LYG2Q86SG7 212 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 FOXRED2Q8IWF2 684 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 LRTM2Q8N967 370 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 MINDY2Q8NBR6 621 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 DUSP18Q8NEJ0 188 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 OR52B4Q8NGK2 314 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 SGMS2Q8NHU3 365 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 ENKURQ8TC29 256 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 CHPT1Q8WUD6 406 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 IL22RA2Q969J5 263 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 CITED1Q99966 193 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 FOXA2Q9Y261 457 aaPredicted RBP6.4□□□□□ -1.38
CDH13-208ENST00000566333 NSG2Q9Y328 171 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 NUBP2Q9Y5Y2 271 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 WSB1Q9Y6I7 421 aa6.4□□□□□ -1.38
CDH13-208ENST00000566333 TRAV41A0A0B4J266 112 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 A0A0B4J293 547 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 A0A0B4J2A0 478 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 IGLC7A0M8Q6 106 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 PSMB11A5LHX3 300 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 ADARB2-AS1A8MUL3 147 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 PTTG1O95997 202 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 IGLV1-40P01703 118 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 IGHG4P01861 327 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 H2AFB2P0C5Z0 115 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 MAS1LP35410 378 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 RPL27AP46776 148 aaKnown RBP6.39□□□□□ -1.39
CDH13-208ENST00000566333 RAB25P57735 213 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 SRPXP78539 464 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 DCTN2Q13561 401 aaKnown RBP6.39□□□□□ -1.39
CDH13-208ENST00000566333 AARDQ4LEZ3 155 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 Q6ZRM9 215 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 C19orf35Q6ZS72 473 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 LYZL2Q7Z4W2 148 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 ZNF329Q86UD4 541 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 RNF152Q8N8N0 203 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 LFNGQ8NES3 379 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 MYOZ3Q8TDC0 251 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 CASTOR1Q8WTX7 329 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 SEC22CQ9BRL7 303 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 AIFM2Q9BRQ8 373 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 ZNF747Q9BV97 191 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 ALX4Q9H161 411 aaPredicted RBP6.39□□□□□ -1.39
CDH13-208ENST00000566333 SHPKQ9UHJ6 478 aa6.39□□□□□ -1.39
CDH13-208ENST00000566333 NOTCH1P46531 2555 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 DUXBA0A1W2PPF3 345 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 HMX3A6NHT5 357 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 CNIH1O95406 144 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 DUS4LO95620 317 aaKnown RBP6.38□□□□□ -1.39
CDH13-208ENST00000566333 OPN1MWP04001 364 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 APELAP0DMC3 54 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 OPN1MW2P0DN77 364 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 OPN1MW3P0DN78 364 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 CD28P10747 220 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 ANXA3P12429 323 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 AREGP15514 252 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 VDAC1P21796 283 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 PSMB8P28062 276 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 C4orf46Q504U0 113 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 AKIRIN2Q53H80 203 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 C12orf54Q6X4T0 127 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 LCNL1Q6ZST4 164 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 H2BFWTQ7Z2G1 175 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 ZNF429Q86V71 674 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 ZNF695Q8IW36 515 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 FAM219AQ8IW50 185 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 LGI3Q8N145 548 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 C11orf44Q8N8P7 122 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 OR5B3Q8NH48 314 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 ABHD5Q8WTS1 349 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 MITD1Q8WV92 249 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 LSM10Q969L4 123 aaKnown RBP6.38□□□□□ -1.39
CDH13-208ENST00000566333 GPR146Q96CH1 333 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 MARVELD1Q9BSK0 173 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 QTRT1Q9BXR0 403 aaKnown RBP6.38□□□□□ -1.39
CDH13-208ENST00000566333 CACNG5Q9UF02 275 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 PRNDQ9UKY0 176 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 KCNIP3Q9Y2W7 256 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 NOTCH3Q9UM47 2321 aa6.38□□□□□ -1.39
CDH13-208ENST00000566333 TEX50A0A1B0GTY4 177 aa6.37□□□□□ -1.39
CDH13-208ENST00000566333 A0A1W2PN81 502 aa6.37□□□□□ -1.39
CDH13-208ENST00000566333 MSGN1A6NI15 193 aa6.37□□□□□ -1.39
CDH13-208ENST00000566333 MPTX1A8MV57 137 aa6.37□□□□□ -1.39
CDH13-208ENST00000566333 ST8SIA3O43173 380 aa6.37□□□□□ -1.39
CDH13-208ENST00000566333 FBXO24O75426 580 aa6.37□□□□□ -1.39
CDH13-208ENST00000566333 RBMXL2O75526 392 aaKnown RBP6.37□□□□□ -1.39
CDH13-208ENST00000566333 ADAP1O75689 374 aa6.37□□□□□ -1.39
CDH13-208ENST00000566333 ACTL6BO94805 426 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms