RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 AP2S1P53680 142 aaPredicted RBP24.45■■□□□ 1.5
CTCF-203ENST00000566078 THNSL2Q86YJ6 484 aa24.45■■□□□ 1.5
CTCF-203ENST00000566078 RAB40CQ96S21 281 aa24.45■■□□□ 1.5
CTCF-203ENST00000566078 FKBP11Q9NYL4 201 aa24.45■■□□□ 1.5
CTCF-203ENST00000566078 KIAA1456Q9P272 454 aa24.45■■□□□ 1.5
CTCF-203ENST00000566078 CACFD1Q9UGQ2 172 aa24.45■■□□□ 1.5
CTCF-203ENST00000566078 TCF19Q9Y242 345 aa24.45■■□□□ 1.5
CTCF-203ENST00000566078 SIGLEC9Q9Y336 463 aa24.45■■□□□ 1.5
CTCF-203ENST00000566078 BOLA1Q9Y3E2 137 aa24.45■■□□□ 1.5
CTCF-203ENST00000566078 RNF222A6NCQ9 220 aa24.44■■□□□ 1.5
CTCF-203ENST00000566078 RRHO14718 337 aa24.44■■□□□ 1.5
CTCF-203ENST00000566078 CD5LO43866 347 aa24.44■■□□□ 1.5
CTCF-203ENST00000566078 OR2F2O95006 317 aa24.44■■□□□ 1.5
CTCF-203ENST00000566078 PLGLAQ15195 96 aa24.44■■□□□ 1.5
CTCF-203ENST00000566078 NPBQ8NG41 125 aa24.44■■□□□ 1.5
CTCF-203ENST00000566078 PLSCR3Q9NRY6 295 aa24.44■■□□□ 1.5
CTCF-203ENST00000566078 MSGN1A6NI15 193 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 NDUFA3O95167 84 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 TMEM50AO95807 157 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 P2RY1P47900 373 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 DYNLT3P51808 116 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 MRGPRG-AS1Q2M3A8 158 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 ACOT7LQ6ZUV0 252 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 DTD1Q8TEA8 209 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 ZNF257Q9Y2Q1 563 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 TLN2Q9Y4G6 2542 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 OTOGQ6ZRI0 2925 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 OPN1MWP04001 364 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 OPN1MW2P0DN77 364 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 OPN1MW3P0DN78 364 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 PAX9P55771 341 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 HSPE1P61604 102 aaKnown RBP24.43■■□□□ 1.5
CTCF-203ENST00000566078 PJVKQ0ZLH3 352 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 PDLIM3Q53GG5 364 aaPredicted RBP24.43■■□□□ 1.5
CTCF-203ENST00000566078 COMMD5Q9GZQ3 224 aa24.43■■□□□ 1.5
CTCF-203ENST00000566078 FGF2P09038 288 aa24.42■■□□□ 1.5
CTCF-203ENST00000566078 PRSS8Q16651 343 aa24.42■■□□□ 1.5
CTCF-203ENST00000566078 LRRC75BQ2VPJ9 315 aa24.42■■□□□ 1.5
CTCF-203ENST00000566078 PPP1R27Q86WC6 154 aa24.42■■□□□ 1.5
CTCF-203ENST00000566078 MMD2Q8IY49 270 aa24.42■■□□□ 1.5
CTCF-203ENST00000566078 BCL6BQ8N143 479 aaPredicted RBP24.42■■□□□ 1.5
CTCF-203ENST00000566078 CLCC1Q96S66 551 aa24.42■■□□□ 1.5
CTCF-203ENST00000566078 SSX3Q99909 188 aa24.42■■□□□ 1.5
CTCF-203ENST00000566078 TEX50A0A1B0GTY4 177 aa24.41■■□□□ 1.5
CTCF-203ENST00000566078 H3BP45 60 aa24.41■■□□□ 1.5
CTCF-203ENST00000566078 HKR1P10072 659 aa24.41■■□□□ 1.5
CTCF-203ENST00000566078 RPL12P30050 165 aaKnown RBP24.41■■□□□ 1.5
CTCF-203ENST00000566078 CAV2P51636 162 aa24.41■■□□□ 1.5
CTCF-203ENST00000566078 RPL23AP62750 156 aaKnown RBP24.41■■□□□ 1.5
CTCF-203ENST00000566078 ZNF345Q14585 488 aa24.41■■□□□ 1.5
CTCF-203ENST00000566078 AQP10Q96PS8 301 aa24.41■■□□□ 1.5
CTCF-203ENST00000566078 HINT2Q9BX68 163 aa24.41■■□□□ 1.5
CTCF-203ENST00000566078 LYRM2Q9NU23 88 aaPredicted RBP24.41■■□□□ 1.5
CTCF-203ENST00000566078 WSB1Q9Y6I7 421 aa24.41■■□□□ 1.5
CTCF-203ENST00000566078 ACANP16112 2415 aa24.41■■□□□ 1.5
CTCF-203ENST00000566078 MDFIC2A0A1B0GVS7 189 aa24.4■■□□□ 1.5
CTCF-203ENST00000566078 NCBP2LA6PVI3 153 aaKnown RBP24.4■■□□□ 1.5
CTCF-203ENST00000566078 GPR137BO60478 399 aa24.4■■□□□ 1.5
CTCF-203ENST00000566078 HOXA1P49639 335 aaPredicted RBP24.4■■□□□ 1.5
CTCF-203ENST00000566078 OR2F1Q13607 317 aa24.4■■□□□ 1.5
CTCF-203ENST00000566078 OR2C3Q8N628 320 aa24.4■■□□□ 1.5
CTCF-203ENST00000566078 OR5B3Q8NH48 314 aa24.4■■□□□ 1.5
CTCF-203ENST00000566078 C22orf15Q8WYQ4 148 aa24.4■■□□□ 1.5
CTCF-203ENST00000566078 SMIM8Q96KF7 97 aa24.4■■□□□ 1.5
CTCF-203ENST00000566078 ZC4H2Q9NQZ6 224 aa24.4■■□□□ 1.5
CTCF-203ENST00000566078 PSENENQ9NZ42 101 aa24.4■■□□□ 1.5
CTCF-203ENST00000566078 FAM24AA6NFZ4 105 aa24.39■■□□□ 1.5
CTCF-203ENST00000566078 TMUB2Q71RG4 321 aa24.39■■□□□ 1.5
CTCF-203ENST00000566078 FLNBO75369 2602 aaKnown RBP24.39■■□□□ 1.5
CTCF-203ENST00000566078 PRCDQ00LT1 54 aa24.39■■□□□ 1.49
CTCF-203ENST00000566078 TNXAQ16473 311 aa24.39■■□□□ 1.49
CTCF-203ENST00000566078 DEFB112Q30KQ8 113 aa24.39■■□□□ 1.49
CTCF-203ENST00000566078 C9orf139Q6ZV77 190 aa24.39■■□□□ 1.49
CTCF-203ENST00000566078 PIFOQ8TCI5 191 aa24.39■■□□□ 1.49
CTCF-203ENST00000566078 CIB3Q96Q77 187 aaPredicted RBP24.39■■□□□ 1.49
CTCF-203ENST00000566078 A0A0D9SG52 128 aa24.38■■□□□ 1.49
CTCF-203ENST00000566078 TAS2R30P59541 319 aa24.38■■□□□ 1.49
CTCF-203ENST00000566078 GNB1P62873 340 aa24.38■■□□□ 1.49
CTCF-203ENST00000566078 C5orf64Q2M2E5 130 aa24.38■■□□□ 1.49
CTCF-203ENST00000566078 C10orf55Q5SWW7 151 aa24.38■■□□□ 1.49
CTCF-203ENST00000566078 KCNRGQ8N5I3 272 aa24.38■■□□□ 1.49
CTCF-203ENST00000566078 TEX29Q8N6K0 151 aa24.38■■□□□ 1.49
CTCF-203ENST00000566078 OR1L8Q8NGR8 309 aa24.38■■□□□ 1.49
CTCF-203ENST00000566078 ARL6Q9H0F7 186 aa24.38■■□□□ 1.49
CTCF-203ENST00000566078 ENY2Q9NPA8 101 aa24.38■■□□□ 1.49
CTCF-203ENST00000566078 YAE1D1Q9NRH1 226 aa24.38■■□□□ 1.49
CTCF-203ENST00000566078 C1RLQ9NZP8 487 aa24.38■■□□□ 1.49
CTCF-203ENST00000566078 H3BUX3 64 aa24.37■■□□□ 1.49
CTCF-203ENST00000566078 MAS1LP35410 378 aa24.37■■□□□ 1.49
CTCF-203ENST00000566078 IL17RELQ6ZVW7 336 aa24.37■■□□□ 1.49
CTCF-203ENST00000566078 PLEKHA3Q9HB20 300 aa24.37■■□□□ 1.49
CTCF-203ENST00000566078 IGSF23A1L1A6 192 aa24.36■■□□□ 1.49
CTCF-203ENST00000566078 TSC22D2O75157 780 aa24.36■■□□□ 1.49
CTCF-203ENST00000566078 ACTL6BO94805 426 aa24.36■■□□□ 1.49
CTCF-203ENST00000566078 S100A11P31949 105 aa24.36■■□□□ 1.49
CTCF-203ENST00000566078 VDAC2P45880 294 aaPredicted RBP24.36■■□□□ 1.49
CTCF-203ENST00000566078 OR8H1Q8NGG4 311 aa24.36■■□□□ 1.49
CTCF-203ENST00000566078 HEYLQ9NQ87 328 aaPredicted RBP24.36■■□□□ 1.49
CTCF-203ENST00000566078 FCN1O00602 326 aa24.35■■□□□ 1.49
CTCF-203ENST00000566078 CA2P00918 260 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms