RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 TMEM167AQ8TBQ9 72 aa15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 C11orf1Q9H5F2 150 aa15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 FOXA2Q9Y261 457 aaPredicted RBP15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 HSPB11Q9Y547 144 aa15.32■□□□□ 0.04
CSPG4P13-201ENST00000565545 KBTBD11O94819 623 aa15.31■□□□□ 0.04
CSPG4P13-201ENST00000565545 MOSP00540 346 aa15.31■□□□□ 0.04
CSPG4P13-201ENST00000565545 CXCL2P19875 107 aa15.31■□□□□ 0.04
CSPG4P13-201ENST00000565545 TAS2R30P59541 319 aa15.31■□□□□ 0.04
CSPG4P13-201ENST00000565545 SPCS3P61009 180 aa15.31■□□□□ 0.04
CSPG4P13-201ENST00000565545 SRSF2Q01130 221 aaKnown RBP15.31■□□□□ 0.04
CSPG4P13-201ENST00000565545 DYNAPQ8N1N2 210 aa15.31■□□□□ 0.04
CSPG4P13-201ENST00000565545 AQP10Q96PS8 301 aa15.31■□□□□ 0.04
CSPG4P13-201ENST00000565545 CIB3Q96Q77 187 aaPredicted RBP15.31■□□□□ 0.04
CSPG4P13-201ENST00000565545 MAGT1Q9H0U3 335 aa15.31■□□□□ 0.04
CSPG4P13-201ENST00000565545 TMEM14BQ9NUH8 114 aa15.31■□□□□ 0.04
CSPG4P13-201ENST00000565545 ZNF257Q9Y2Q1 563 aa15.31■□□□□ 0.04
CSPG4P13-201ENST00000565545 CHST1O43916 411 aa15.3■□□□□ 0.04
CSPG4P13-201ENST00000565545 SSSCA1O60232 199 aa15.3■□□□□ 0.04
CSPG4P13-201ENST00000565545 HSPE1P61604 102 aaKnown RBP15.3■□□□□ 0.04
CSPG4P13-201ENST00000565545 RPL23AP62750 156 aaKnown RBP15.3■□□□□ 0.04
CSPG4P13-201ENST00000565545 KCNRGQ8N5I3 272 aa15.3■□□□□ 0.04
CSPG4P13-201ENST00000565545 TEX29Q8N6K0 151 aa15.3■□□□□ 0.04
CSPG4P13-201ENST00000565545 SMIM8Q96KF7 97 aa15.3■□□□□ 0.04
CSPG4P13-201ENST00000565545 QTRT1Q9BXR0 403 aaKnown RBP15.3■□□□□ 0.04
CSPG4P13-201ENST00000565545 RBKSQ9H477 322 aa15.3■□□□□ 0.04
CSPG4P13-201ENST00000565545 WSB1Q9Y6I7 421 aa15.3■□□□□ 0.04
CSPG4P13-201ENST00000565545 TRAV3A0A0B4J244 114 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 IFNA17P01571 189 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 IGKV1D-33P01593 117 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 IGKV1-33P01594 117 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 CRYGBP07316 175 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 FAM106CPP0CH98 169 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 IGHV4-38-2P0DP08 117 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 S100A11P31949 105 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 DYNLT3P51808 116 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 PSG5Q15238 335 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 IL17RELQ6ZVW7 336 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 TMUB2Q71RG4 321 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 C17orf50Q8WW18 174 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 SLC25A31Q9H0C2 315 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 MEGF9Q9H1U4 602 aa15.29■□□□□ 0.04
CSPG4P13-201ENST00000565545 RNF222A6NCQ9 220 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 NXPH3O95157 252 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 AVPP01185 164 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 SNRNP70P08621 437 aaKnown RBP15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 HKR1P10072 659 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 HNF1AP20823 631 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 RPL12P30050 165 aaKnown RBP15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 MAS1LP35410 378 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 OR2B8PP59922 312 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 RPL8P62917 257 aaKnown RBP15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 KLF17Q5JT82 389 aaPredicted RBP15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 FAM120AOSQ5T036 256 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 MMD2Q8IY49 270 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 OR2C3Q8N628 320 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 NPBQ8NG41 125 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 OR5B3Q8NH48 314 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 EAF1Q96JC9 268 aaPredicted RBP15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 RITA1Q96K30 269 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 CLCC1Q96S66 551 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 LYRM2Q9NU23 88 aaPredicted RBP15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 NUP50Q9UKX7 468 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 OR51B2Q9Y5P1 312 aa15.28■□□□□ 0.04
CSPG4P13-201ENST00000565545 CEBPZOSA8MTT3 80 aa15.27■□□□□ 0.04
CSPG4P13-201ENST00000565545 SLC25A17O43808 307 aa15.27■□□□□ 0.04
CSPG4P13-201ENST00000565545 TSC22D2O75157 780 aa15.27■□□□□ 0.04
CSPG4P13-201ENST00000565545 PAX9P55771 341 aa15.27■□□□□ 0.04
CSPG4P13-201ENST00000565545 RUSC1-AS1Q66K80 236 aa15.27■□□□□ 0.04
CSPG4P13-201ENST00000565545 Q8N6K4 173 aa15.27■□□□□ 0.04
CSPG4P13-201ENST00000565545 OR8H1Q8NGG4 311 aa15.27■□□□□ 0.04
CSPG4P13-201ENST00000565545 NANPQ8TBE9 248 aa15.27■□□□□ 0.04
CSPG4P13-201ENST00000565545 DTD1Q8TEA8 209 aa15.27■□□□□ 0.04
CSPG4P13-201ENST00000565545 COMMD5Q9GZQ3 224 aa15.27■□□□□ 0.04
CSPG4P13-201ENST00000565545 ARL6Q9H0F7 186 aa15.27■□□□□ 0.04
CSPG4P13-201ENST00000565545 KIAA1456Q9P272 454 aa15.27■□□□□ 0.04
CSPG4P13-201ENST00000565545 TCF19Q9Y242 345 aa15.27■□□□□ 0.04
CSPG4P13-201ENST00000565545 FAM96BQ9Y3D0 163 aa15.27■□□□□ 0.04
CSPG4P13-201ENST00000565545 CUBNO60494 3623 aa15.27■□□□□ 0.03
CSPG4P13-201ENST00000565545 IGHV3OR16-10A0A075B7F0 116 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 RRHO14718 337 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 NBR2O15453 112 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 NDUFA3O95167 84 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 FBP1P09467 338 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 HES1Q14469 280 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 OPCMLQ14982 345 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 AANATQ16613 207 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 BRD3OSQ6XYD6 125 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 ZC4H2Q9NQZ6 224 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 PLSCR3Q9NRY6 295 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 PSENENQ9NZ42 101 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 C1RLQ9NZP8 487 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 METTL1Q9UBP6 276 aaKnown RBP15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 SIGLEC9Q9Y336 463 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 BOLA1Q9Y3E2 137 aa15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 TET2Q6N021 2002 aaPredicted RBP15.26■□□□□ 0.03
CSPG4P13-201ENST00000565545 TEX50A0A1B0GTY4 177 aa15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 KANTRA0A1W2PQU2 76 aa15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 TAAR5O14804 337 aa15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 FSHBP01225 129 aa15.25■□□□□ 0.03
CSPG4P13-201ENST00000565545 CAV2P51636 162 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms