RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	ACY3	Q96HD9	319 aa		10.86	□□□□□ -0.67
SCAPER-215	ENST00000565507	C14orf144	Q96I85	54 aa		10.86	□□□□□ -0.67
SCAPER-215	ENST00000565507	RHOV	Q96L33	236 aa		10.86	□□□□□ -0.67
SCAPER-215	ENST00000565507	GGTLC1	Q9BX51	225 aa		10.86	□□□□□ -0.67
SCAPER-215	ENST00000565507	TMEM140	Q9NV12	185 aa		10.86	□□□□□ -0.67
SCAPER-215	ENST00000565507	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	10.86	□□□□□ -0.67
SCAPER-215	ENST00000565507	FUT9	Q9Y231	359 aa		10.86	□□□□□ -0.67
SCAPER-215	ENST00000565507	TET2	Q6N021	2002 aa	Predicted RBP	10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	TRBV20OR9-2	A0A075B6H5	130 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	CEACAM4	O75871	244 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	STAG3L2	P0CL84	134 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	STAG3L3	P0CL85	134 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	PAX1	P15863	534 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	PKIA	P61925	76 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	LCN2	P80188	198 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	CST9LP1	Q5W188	147 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	MIC13	Q5XKP0	118 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	BHLHA15	Q7RTS1	189 aa	Predicted RBP	10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	TMEM37	Q8WXS4	190 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	SCNM1	Q9BWG6	230 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	LSM4	Q9Y4Z0	139 aa	Known RBP	10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	PIEZO1	Q92508	2521 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	LHB	P01229	141 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	ARL14EPL	P0DKL9	152 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	TMEM144	Q7Z5S9	345 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	S1PR3	Q99500	378 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	PROCR	Q9UNN8	238 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	TCF19	Q9Y242	345 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	PXMP4	Q9Y6I8	212 aa		10.85	□□□□□ -0.67
SCAPER-215	ENST00000565507	PGPEP1L	A6NFU8	196 aa		10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507	AHRR	A9YTQ3	701 aa		10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507	C1QTNF9	P0C862	333 aa		10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507	UNQ6494/PRO21346	Q6UXR6	183 aa		10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507	PPP1R35	Q8TAP8	253 aa		10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507	OR2V2	Q96R30	315 aa		10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507	TRGV8	A0A0C4DH27	118 aa		10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507		F6UZH7	168 aa		10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507	IL3RA	P26951	378 aa		10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507	RPL15	P61313	204 aa	Known RBP	10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507	ERVK-16	P61578	105 aa		10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507	C17orf58	Q2M2W7	97 aa		10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507	ALKBH2	Q6NS38	261 aa		10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507	RBMXL3	Q8N7X1	1067 aa	Known RBP	10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507	CALY	Q9NYX4	217 aa		10.84	□□□□□ -0.67
SCAPER-215	ENST00000565507	DDT	P30046	118 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	CT45A1	Q5HYN5	189 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	FAM78B	Q5VT40	261 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	KCNIP4	Q6PIL6	250 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	MOGAT3	Q86VF5	341 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	CT45A3	Q8NHU0	189 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	LEAP2	Q969E1	77 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	PRO1933	Q9H354	126 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	C15orf61	A6NNL5	157 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	ITGB1BP1	O14713	200 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	SELL	P14151	372 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	COL8A2	P25067	703 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	FOXL1	Q12952	345 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	IMMP2L	Q96T52	175 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	TXNDC17	Q9BRA2	123 aa		10.83	□□□□□ -0.68
SCAPER-215	ENST00000565507	SVEP1	Q4LDE5	3571 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	PLCE1	Q9P212	2302 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	CXorf1	O96002	111 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	KIR2DS2	P43631	304 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	SDSL	Q96GA7	329 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	NPVF	Q9HCQ7	196 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	DCHS2	Q6V1P9	2916 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	MBD3L4	A6NDZ8	208 aa	Predicted RBP	10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	MBD3L3	A6NE82	208 aa	Predicted RBP	10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	MBD3L5	A6NJ08	208 aa	Predicted RBP	10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	TSTD3	H0UI37	97 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	ZNF83	P51522	516 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	FAM201A	Q5SY85	155 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	ZADH2	Q8N4Q0	377 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	OR4S2	Q8NH73	311 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	SSMEM1	Q8WWF3	244 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	SFRP2	Q96HF1	295 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	TMEM204	Q9BSN7	226 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	NCOR1P1	Q9H4R4	102 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	SEPSECS	Q9HD40	501 aa	Known RBP	10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	TMEM14B	Q9NUH8	114 aa		10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.82	□□□□□ -0.68
SCAPER-215	ENST00000565507	SAA2-SAA4	A0A096LPE2	208 aa		10.81	□□□□□ -0.68
SCAPER-215	ENST00000565507	SCO2	A0A1W2PP80	73 aa		10.81	□□□□□ -0.68
SCAPER-215	ENST00000565507	SAA2	P0DJI9	122 aa	Predicted RBP	10.81	□□□□□ -0.68
SCAPER-215	ENST00000565507	OR4A47	Q6IF82	309 aa		10.81	□□□□□ -0.68
SCAPER-215	ENST00000565507	FOXA2	Q9Y261	457 aa	Predicted RBP	10.81	□□□□□ -0.68
SCAPER-215	ENST00000565507	DSCAM	O60469	2012 aa		10.81	□□□□□ -0.68
SCAPER-215	ENST00000565507	IL6R	P08887	468 aa	Predicted RBP	10.81	□□□□□ -0.68
SCAPER-215	ENST00000565507	RAB7A	P51149	207 aa		10.81	□□□□□ -0.68
SCAPER-215	ENST00000565507	EFNB3	Q15768	340 aa		10.81	□□□□□ -0.68
SCAPER-215	ENST00000565507	ZNF474	Q6S9Z5	364 aa	Predicted RBP	10.81	□□□□□ -0.68
SCAPER-215	ENST00000565507	REC114	Q7Z4M0	266 aa		10.81	□□□□□ -0.68
SCAPER-215	ENST00000565507		A0A087X0M5	115 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	KBTBD11-OT1	A0A1B0GTJ5	212 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507		A0A1B0GX30	115 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	MKRN2OS	H3BPM6	223 aa		10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	CNN1	P51911	297 aa	Known RBP	10.8	□□□□□ -0.68
SCAPER-215	ENST00000565507	HSPE1	P61604	102 aa	Known RBP	10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms