RNA–Protein interactions for RNA: ENST00000565274.5

CAPN3-214, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-214ENST00000565274 OR5G3P0C626 314 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 USF1P22415 310 aaPredicted RBP4.28□□□□□ -1.72
CAPN3-214ENST00000565274 RPL29P47914 159 aaKnown RBP4.28□□□□□ -1.72
CAPN3-214ENST00000565274 MEOX1P50221 254 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 OR1D5P58170 312 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 SLC35A1P78382 337 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 POU3F1Q03052 451 aaPredicted RBP4.28□□□□□ -1.72
CAPN3-214ENST00000565274 FMODQ06828 376 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 FOXF1Q12946 379 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 MYBPHQ13203 477 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 TGIF1Q15583 401 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 IAH1Q2TAA2 248 aaPredicted RBP4.28□□□□□ -1.72
CAPN3-214ENST00000565274 DEFB133Q30KQ1 61 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 KRTAP27-1Q3LI81 207 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 CD300EQ496F6 205 aaPredicted RBP4.28□□□□□ -1.72
CAPN3-214ENST00000565274 AADACL3Q5VUY0 350 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 OTPQ5XKR4 325 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 FAM90A2PQ658T7 463 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 GLIPR1L1Q6UWM5 242 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 NEGR1Q7Z3B1 354 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 ZNF101Q8IZC7 436 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 SLC25A45Q8N413 288 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 GBGT1Q8N5D6 347 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 METTL27Q8N6F8 245 aaPredicted RBP4.28□□□□□ -1.72
CAPN3-214ENST00000565274 LRTM2Q8N967 370 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 C5orf17Q8NAS9 161 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 OR5A2Q8NGI9 324 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 OR2AJ1Q8NGZ0 328 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 DYRK2Q92630 601 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 TMEM54Q969K7 222 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 CLDN23Q96B33 292 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 MUCL1Q96DR8 90 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 IP6K3Q96PC2 410 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 ATP5SQ99766 215 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 HSPB9Q9BQS6 159 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 TMEM59Q9BXS4 323 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 SLC35B3Q9H1N7 401 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 PRORYQ9H606 182 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 SH2D2AQ9NP31 389 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 KCNJ16Q9NPI9 418 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 C19orf25Q9UFG5 118 aaPredicted RBP4.28□□□□□ -1.72
CAPN3-214ENST00000565274 NSG2Q9Y328 171 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 LAMA2P24043 3122 aaKnown RBP4.28□□□□□ -1.72
CAPN3-214ENST00000565274 LAMA3Q16787 3333 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 RANBP2P49792 3224 aaKnown RBP4.28□□□□□ -1.72
CAPN3-214ENST00000565274 MPDZO75970 2070 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 ATG2BQ96BY7 2078 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 CEP290O15078 2479 aa4.28□□□□□ -1.72
CAPN3-214ENST00000565274 SPTBP11277 2137 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 KIF26BQ2KJY2 2108 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 KNL1Q8NG31 2342 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 LOC102724200A0A096LPH7 203 aaPredicted RBP4.27□□□□□ -1.73
CAPN3-214ENST00000565274 IGKV1-9A0A0C4DH69 117 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 C17orf51A8MQB3 221 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 FABP5P3A8MUU1 101 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 H0YL77 283 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 SOCS1O15524 211 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 ZNF207O43670 478 aaKnown RBP4.27□□□□□ -1.73
CAPN3-214ENST00000565274 SYNGR1O43759 233 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 TRAPPC6AO75865 159 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 IGF1P05019 195 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 SP9P0CG40 484 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 RPL7P18124 248 aaKnown RBP4.27□□□□□ -1.73
CAPN3-214ENST00000565274 LEPP41159 167 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 OR3A2P47893 321 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 FBXW4P57775 412 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 RPS28P62857 69 aaKnown RBP4.27□□□□□ -1.73
CAPN3-214ENST00000565274 HSD52Q0P140 79 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 KLRB1Q12918 225 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 ARFRP1Q13795 201 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 ZNF266Q14584 549 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 GGNBP1Q5YKI7 109 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 IGFL4Q6B9Z1 124 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 C12orf54Q6X4T0 127 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 Q6ZS49 121 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 HAPLN4Q86UW8 402 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 FAM24BQ8N5W8 94 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 GATD1Q8NB37 220 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 SUMF2Q8NBJ7 301 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 GJC3Q8NFK1 279 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 OR8B12Q8NGG6 310 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 OR51E1Q8TCB6 317 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 MRPL24Q96A35 216 aaKnown RBP4.27□□□□□ -1.73
CAPN3-214ENST00000565274 MOB3AQ96BX8 217 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 ARHGAP5-AS1Q96IT6 56 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 LINC00477Q96M19 166 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 HIST1H2AAQ96QV6 131 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 RASL11BQ9BPW5 248 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 C1QTNF4Q9BXJ3 329 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 SMIM3Q9BZL3 60 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 OR10A2Q9H208 303 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 MS4A6AQ9H2W1 248 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 OR51I2Q9H344 312 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 GPR84Q9NQS5 396 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 SIGLEC8Q9NYZ4 499 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 EHFQ9NZC4 300 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 IL36GQ9NZH8 169 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 DOK5Q9P104 306 aa4.27□□□□□ -1.73
CAPN3-214ENST00000565274 MCTS1Q9ULC4 181 aaKnown RBP4.27□□□□□ -1.73
CAPN3-214ENST00000565274 LSM5Q9Y4Y9 91 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 951.7 ms