RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 KRASP01116 189 aa13.06□□□□□ -0.32
RNF40-206ENST00000564260 SSX9Q7RTT3 188 aa13.06□□□□□ -0.32
RNF40-206ENST00000564260 MRPL41Q8IXM3 137 aaKnown RBP13.06□□□□□ -0.32
RNF40-206ENST00000564260 TMEM56Q96MV1 263 aa13.06□□□□□ -0.32
RNF40-206ENST00000564260 TP53RKQ96S44 253 aa13.06□□□□□ -0.32
RNF40-206ENST00000564260 PHB2Q99623 299 aa13.06□□□□□ -0.32
RNF40-206ENST00000564260 VSIG4Q9Y279 399 aa13.06□□□□□ -0.32
RNF40-206ENST00000564260 ZNF257Q9Y2Q1 563 aa13.06□□□□□ -0.32
RNF40-206ENST00000564260 WSB1Q9Y6I7 421 aa13.06□□□□□ -0.32
RNF40-206ENST00000564260 TMEM56-RWDD3S4R434 201 aa13.06□□□□□ -0.32
RNF40-206ENST00000564260 A0A1W2PN81 502 aa13.05□□□□□ -0.32
RNF40-206ENST00000564260 MSGN1A6NI15 193 aa13.05□□□□□ -0.32
RNF40-206ENST00000564260 NPIPB5A8MRT5 1133 aa13.05□□□□□ -0.32
RNF40-206ENST00000564260 ADARB2-AS1A8MUL3 147 aa13.05□□□□□ -0.32
RNF40-206ENST00000564260 NDUFB6O95139 128 aa13.05□□□□□ -0.32
RNF40-206ENST00000564260 DHFRP00374 187 aa13.05□□□□□ -0.32
RNF40-206ENST00000564260 CHRNA7P36544 502 aa13.05□□□□□ -0.32
RNF40-206ENST00000564260 RAB9AP51151 201 aa13.05□□□□□ -0.32
RNF40-206ENST00000564260 TRIM16LQ309B1 348 aa13.05□□□□□ -0.32
RNF40-206ENST00000564260 FAM209BQ5JX69 171 aa13.05□□□□□ -0.32
RNF40-206ENST00000564260 H2BFWTQ7Z2G1 175 aa13.05□□□□□ -0.32
RNF40-206ENST00000564260 ZNF429Q86V71 674 aa13.05□□□□□ -0.32
RNF40-206ENST00000564260 TTC9CQ8N5M4 171 aa13.05□□□□□ -0.32
RNF40-206ENST00000564260 FAM110DQ8TAY7 271 aaPredicted RBP13.05□□□□□ -0.32
RNF40-206ENST00000564260 RBPMSQ93062 196 aaKnown RBP13.05□□□□□ -0.32
RNF40-206ENST00000564260 A0A0G2JLM5 398 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 DUXBA0A1W2PPF3 345 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 IGKV1-39P01597 117 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 IGKV1D-39P04432 117 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 OR5AC1P0C628 307 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 OR9G9P0C7N8 305 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 G6PCP35575 357 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 RUNX1Q01196 453 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 KLK9Q2XQG4 91 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 C10orf99Q6UWK7 81 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 ZNF695Q8IW36 515 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 C11orf44Q8N8P7 122 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 OR1L8Q8NGR8 309 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 GLYATL2Q8WU03 294 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 RRNAD1Q96FB5 475 aaKnown RBP13.04□□□□□ -0.32
RNF40-206ENST00000564260 FAM103A1Q9BTL3 118 aaKnown RBP13.04□□□□□ -0.32
RNF40-206ENST00000564260 QTRT1Q9BXR0 403 aaKnown RBP13.04□□□□□ -0.32
RNF40-206ENST00000564260 TMEM14BQ9NUH8 114 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 KLK9Q9UKQ9 250 aa13.04□□□□□ -0.32
RNF40-206ENST00000564260 C15orf61A6NNL5 157 aa13.03□□□□□ -0.32
RNF40-206ENST00000564260 CYB5BO43169 146 aa13.03□□□□□ -0.32
RNF40-206ENST00000564260 LYRM1O43325 122 aa13.03□□□□□ -0.32
RNF40-206ENST00000564260 CRYGCP07315 174 aa13.03□□□□□ -0.32
RNF40-206ENST00000564260 P0C879 139 aa13.03□□□□□ -0.32
RNF40-206ENST00000564260 AKR1C2P52895 323 aa13.03□□□□□ -0.32
RNF40-206ENST00000564260 OR2B8PP59922 312 aa13.03□□□□□ -0.32
RNF40-206ENST00000564260 CENPSQ8N2Z9 138 aa13.03□□□□□ -0.32
RNF40-206ENST00000564260 C4orf3Q8WVX3 66 aa13.03□□□□□ -0.32
RNF40-206ENST00000564260 LSM10Q969L4 123 aaKnown RBP13.03□□□□□ -0.32
RNF40-206ENST00000564260 TMEM230Q96A57 120 aa13.03□□□□□ -0.32
RNF40-206ENST00000564260 USMG5Q96IX5 58 aa13.03□□□□□ -0.32
RNF40-206ENST00000564260 TET2Q6N021 2002 aaPredicted RBP13.02□□□□□ -0.33
RNF40-206ENST00000564260 TEX22C9J3V5 150 aa13.02□□□□□ -0.33
RNF40-206ENST00000564260 SOX15O60248 233 aa13.02□□□□□ -0.33
RNF40-206ENST00000564260 RPLP1P05386 114 aaKnown RBP13.02□□□□□ -0.33
RNF40-206ENST00000564260 PF4V1P10720 104 aa13.02□□□□□ -0.33
RNF40-206ENST00000564260 AARDQ4LEZ3 155 aa13.02□□□□□ -0.33
RNF40-206ENST00000564260 KHDC1LQ5JSQ8 128 aa13.02□□□□□ -0.33
RNF40-206ENST00000564260 ASPHD1Q5U4P2 390 aa13.02□□□□□ -0.33
RNF40-206ENST00000564260 MZT2BQ6NZ67 158 aa13.02□□□□□ -0.33
RNF40-206ENST00000564260 ZNF491Q8N8L2 437 aa13.02□□□□□ -0.33
RNF40-206ENST00000564260 ADAD2Q8NCV1 583 aaKnown RBP13.02□□□□□ -0.33
RNF40-206ENST00000564260 OR4A16Q8NH70 328 aa13.02□□□□□ -0.33
RNF40-206ENST00000564260 A0A0B4J2A0 478 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 FAM223BA6NKX1 122 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 PLA2G10O15496 165 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 UPK1BO75841 260 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 TRAPPC2P0DI81 140 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 TRAPPC2BP0DI82 140 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 HIST1H1BP16401 226 aaKnown RBP13.01□□□□□ -0.33
RNF40-206ENST00000564260 AKR1C4P17516 323 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 BTCP35070 178 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 SUPT4H1P63272 117 aaKnown RBP13.01□□□□□ -0.33
RNF40-206ENST00000564260 ASAH1Q13510 395 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 KIAA0141Q14154 515 aaPredicted RBP13.01□□□□□ -0.33
RNF40-206ENST00000564260 TMEM187Q14656 261 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 NSUN5P1Q3KNT7 163 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 TREML4Q6UXN2 200 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 TMED4Q7Z7H5 227 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 FAM223AQ8IWN6 122 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 LGI3Q8N145 548 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 LRTM2Q8N967 370 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 OR1L6Q8NGR2 347 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 ALX4Q9H161 411 aaPredicted RBP13.01□□□□□ -0.33
RNF40-206ENST00000564260 NDUFA4L2Q9NRX3 87 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 SHPKQ9UHJ6 478 aa13.01□□□□□ -0.33
RNF40-206ENST00000564260 TRRAPQ9Y4A5 3859 aa13□□□□□ -0.33
RNF40-206ENST00000564260 INS-IGF2F8WCM5 200 aa13□□□□□ -0.33
RNF40-206ENST00000564260 IGKV1-5P01602 117 aa13□□□□□ -0.33
RNF40-206ENST00000564260 CTRB1P17538 263 aa13□□□□□ -0.33
RNF40-206ENST00000564260 PSMB6P28072 239 aa13□□□□□ -0.33
RNF40-206ENST00000564260 MYCNOSP40205 109 aa13□□□□□ -0.33
RNF40-206ENST00000564260 CCR6P51684 374 aa13□□□□□ -0.33
RNF40-206ENST00000564260 SP6Q3SY56 376 aa13□□□□□ -0.33
RNF40-206ENST00000564260 CTRB2Q6GPI1 263 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms