RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 NDUFB11Q9NX14 153 aa15.61■□□□□ 0.09
HERC2-204ENST00000563945 KLK5Q9Y337 293 aaPredicted RBP15.61■□□□□ 0.09
HERC2-204ENST00000563945 IGLV11-55A0A075B6I3 123 aa15.6■□□□□ 0.09
HERC2-204ENST00000563945 A0A0J9YWU9 116 aa15.6■□□□□ 0.09
HERC2-204ENST00000563945 TMEM235A6NFC5 223 aa15.6■□□□□ 0.09
HERC2-204ENST00000563945 MFSD2BA6NFX1 497 aa15.6■□□□□ 0.09
HERC2-204ENST00000563945 SPRY2O43597 315 aa15.6■□□□□ 0.09
HERC2-204ENST00000563945 GPR183P32249 361 aa15.6■□□□□ 0.09
HERC2-204ENST00000563945 ELLP55199 621 aaPredicted RBP15.6■□□□□ 0.09
HERC2-204ENST00000563945 SPAG16Q8N0X2 631 aa15.6■□□□□ 0.09
HERC2-204ENST00000563945 SECTM1Q8WVN6 248 aa15.6■□□□□ 0.09
HERC2-204ENST00000563945 COMMD5Q9GZQ3 224 aa15.6■□□□□ 0.09
HERC2-204ENST00000563945 BET1LQ9NYM9 111 aa15.6■□□□□ 0.09
HERC2-204ENST00000563945 ALMS1Q8TCU4 4167 aa15.59■□□□□ 0.09
HERC2-204ENST00000563945 IGHV3-35A0A0C4DH35 117 aa15.59■□□□□ 0.09
HERC2-204ENST00000563945 A0A1B0GW64 132 aa15.59■□□□□ 0.09
HERC2-204ENST00000563945 SMIM30A4D0T7 59 aa15.59■□□□□ 0.09
HERC2-204ENST00000563945 NOTOA8MTQ0 251 aa15.59■□□□□ 0.09
HERC2-204ENST00000563945 TNFSF12O43508 249 aa15.59■□□□□ 0.09
HERC2-204ENST00000563945 LAMTOR1Q6IAA8 161 aa15.59■□□□□ 0.09
HERC2-204ENST00000563945 Q6ZWC4 215 aa15.59■□□□□ 0.09
HERC2-204ENST00000563945 TP53TG1Q9Y2A0 90 aa15.59■□□□□ 0.09
HERC2-204ENST00000563945 UBE2CO00762 179 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 C8orf88P0DMB2 117 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 CATR1Q13166 79 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 EIF4EBP1Q13541 118 aaPredicted RBP15.58■□□□□ 0.08
HERC2-204ENST00000563945 KLK9Q2XQG4 91 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 TIMM50Q3ZCQ8 353 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 CEMP1Q6PRD7 247 aaPredicted RBP15.58■□□□□ 0.08
HERC2-204ENST00000563945 UNQ9165/PRO28630Q6UXU0 137 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 LYG2Q86SG7 212 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 WFDC3Q8IUB2 231 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 TMEM217Q8N7C4 229 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 STPG3Q8N7X2 389 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 ZBTB34Q8NCN2 500 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 GPHA2Q96T91 129 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 SPAG8Q99932 426 aaPredicted RBP15.58■□□□□ 0.08
HERC2-204ENST00000563945 VCX3BQ9H321 246 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 C5orf66Q9H5L9 145 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 CCL28Q9NRJ3 127 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 KLK9Q9UKQ9 250 aa15.58■□□□□ 0.08
HERC2-204ENST00000563945 PTBP1P26599 531 aaKnown RBP eCLIP15.57■□□□□ 0.086e-9■■■■□ 25.3
HERC2-204ENST00000563945 FCGR2CP31995 323 aa15.57■□□□□ 0.08
HERC2-204ENST00000563945 BRWD1-AS2P59051 145 aa15.57■□□□□ 0.08
HERC2-204ENST00000563945 TNFRSF9Q07011 255 aa15.57■□□□□ 0.08
HERC2-204ENST00000563945 ZNF502Q8TBZ5 544 aa15.57■□□□□ 0.08
HERC2-204ENST00000563945 UBQLN2Q9UHD9 624 aa15.57■□□□□ 0.08
HERC2-204ENST00000563945 DAPK2Q9UIK4 370 aa15.57■□□□□ 0.08
HERC2-204ENST00000563945 NQO2P16083 231 aa15.56■□□□□ 0.08
HERC2-204ENST00000563945 TAS2R31P59538 309 aa15.56■□□□□ 0.08
HERC2-204ENST00000563945 OR2B8PP59922 312 aa15.56■□□□□ 0.08
HERC2-204ENST00000563945 MSMO1Q15800 293 aa15.56■□□□□ 0.08
HERC2-204ENST00000563945 DEFB135Q30KP9 77 aa15.56■□□□□ 0.08
HERC2-204ENST00000563945 NR2C2APQ86WQ0 139 aa15.56■□□□□ 0.08
HERC2-204ENST00000563945 BEST4Q8NFU0 473 aa15.56■□□□□ 0.08
HERC2-204ENST00000563945 NRG4Q8WWG1 115 aa15.56■□□□□ 0.08
HERC2-204ENST00000563945 CNBD2Q96M20 576 aa15.56■□□□□ 0.08
HERC2-204ENST00000563945 SRSF8Q9BRL6 282 aaKnown RBP15.56■□□□□ 0.08
HERC2-204ENST00000563945 SLC5A7Q9GZV3 580 aa15.56■□□□□ 0.08
HERC2-204ENST00000563945 ANKRD65E5RJM6 399 aa15.55■□□□□ 0.08
HERC2-204ENST00000563945 UPK2O00526 184 aa15.55■□□□□ 0.08
HERC2-204ENST00000563945 RBFOX2O43251 390 aaKnown RBP eCLIP15.55■□□□□ 0.08
HERC2-204ENST00000563945 SSX5O60225 188 aa15.55■□□□□ 0.08
HERC2-204ENST00000563945 HPRT1P00492 218 aa15.55■□□□□ 0.08
HERC2-204ENST00000563945 SLC25A24Q6NUK1 477 aa15.55■□□□□ 0.08
HERC2-204ENST00000563945 TPRA1Q86W33 373 aa15.55■□□□□ 0.08
HERC2-204ENST00000563945 DMBX1Q8NFW5 382 aa15.55■□□□□ 0.08
HERC2-204ENST00000563945 OR13F1Q8NGS4 319 aa15.55■□□□□ 0.08
HERC2-204ENST00000563945 VN1R17PQ8TDU5 208 aa15.55■□□□□ 0.08
HERC2-204ENST00000563945 SULT1C2O00338 296 aa15.54■□□□□ 0.08
HERC2-204ENST00000563945 TSPAN4O14817 238 aa15.54■□□□□ 0.08
HERC2-204ENST00000563945 TGOLN2O43493 480 aa15.54■□□□□ 0.08
HERC2-204ENST00000563945 RPA2P15927 270 aa15.54■□□□□ 0.08
HERC2-204ENST00000563945 HSPA13P48723 471 aa15.54■□□□□ 0.08
HERC2-204ENST00000563945 THOC7Q6I9Y2 204 aaKnown RBP15.54■□□□□ 0.08
HERC2-204ENST00000563945 QTRT1Q9BXR0 403 aaKnown RBP15.54■□□□□ 0.08
HERC2-204ENST00000563945 ZNF436Q9C0F3 470 aaPredicted RBP15.54■□□□□ 0.08
HERC2-204ENST00000563945 C6orf62Q9GZU0 229 aaPredicted RBP15.54■□□□□ 0.08
HERC2-204ENST00000563945 RRP15Q9Y3B9 282 aaKnown RBP15.54■□□□□ 0.08
HERC2-204ENST00000563945 KIR2DL5BA0A0G2JN68 375 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 KIR2DL5BA0A0G2JPC4 375 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 IGLC7A0M8Q6 106 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 OR4C46A6NHA9 309 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 CGB1A6NKQ9 187 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 PPYP01298 95 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 TRAPPC2P0DI81 140 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 TRAPPC2BP0DI82 140 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 FXYD4P59646 89 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 ERVK-16P61578 105 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 HSD17B13Q7Z5P4 300 aaPredicted RBP15.53■□□□□ 0.08
HERC2-204ENST00000563945 KIR2DL5AQ8N109 375 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 KIR2DL5BQ8NHK3 375 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 CD300LFQ8TDQ1 290 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 TMEM190Q8WZ59 177 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 C20orf24Q9BUV8 137 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 DAZ1Q9NQZ3 744 aaKnown RBP15.53■□□□□ 0.08
HERC2-204ENST00000563945 TXNL4BQ9NX01 149 aaKnown RBP15.53■□□□□ 0.08
HERC2-204ENST00000563945 RHBDL2Q9NX52 303 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 SSR3Q9UNL2 185 aa15.53■□□□□ 0.08
HERC2-204ENST00000563945 TRAV18A0A075B6X5 111 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms