RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 RAB9AP51151 201 aa12.14□□□□□ -0.47
RNF40-205ENST00000563909 RPL30P62888 115 aaKnown RBP12.14□□□□□ -0.47
RNF40-205ENST00000563909 OR51S1Q8NGJ8 323 aa12.14□□□□□ -0.47
RNF40-205ENST00000563909 TCTEX1D2Q8WW35 142 aa12.14□□□□□ -0.47
RNF40-205ENST00000563909 WSB1Q9Y6I7 421 aa12.14□□□□□ -0.47
RNF40-205ENST00000563909 NAP1L6A6NFF2 107 aa12.13□□□□□ -0.47
RNF40-205ENST00000563909 CENPXA8MT69 81 aa12.13□□□□□ -0.47
RNF40-205ENST00000563909 PGLYRP1O75594 196 aaPredicted RBP12.13□□□□□ -0.47
RNF40-205ENST00000563909 IGLV1-40P01703 118 aa12.13□□□□□ -0.47
RNF40-205ENST00000563909 PPIFP30405 207 aaKnown RBP12.13□□□□□ -0.47
RNF40-205ENST00000563909 KIR2DS2P43631 304 aa12.13□□□□□ -0.47
RNF40-205ENST00000563909 LGALS7P47929 136 aa12.13□□□□□ -0.47
RNF40-205ENST00000563909 RPS16P62249 146 aaKnown RBP12.13□□□□□ -0.47
RNF40-205ENST00000563909 PMS2P11Q13670 270 aa12.13□□□□□ -0.47
RNF40-205ENST00000563909 SURF2Q15527 256 aaPredicted RBP12.13□□□□□ -0.47
RNF40-205ENST00000563909 MMDQ15546 238 aa12.13□□□□□ -0.47
RNF40-205ENST00000563909 IDO2Q6ZQW0 420 aa12.13□□□□□ -0.47
RNF40-205ENST00000563909 SCGB3A2Q96PL1 93 aa12.13□□□□□ -0.47
RNF40-205ENST00000563909 TSNAXQ99598 290 aaKnown RBP12.13□□□□□ -0.47
RNF40-205ENST00000563909 ELOVL1Q9BW60 279 aa12.13□□□□□ -0.47
RNF40-205ENST00000563909 IGHV4OR15-8A0A075B7B6 117 aa12.12□□□□□ -0.47
RNF40-205ENST00000563909 A0A087WW49 117 aa12.12□□□□□ -0.47
RNF40-205ENST00000563909 G3V318 75 aa12.12□□□□□ -0.47
RNF40-205ENST00000563909 NBR2O15453 112 aa12.12□□□□□ -0.47
RNF40-205ENST00000563909 FCGR3BO75015 233 aa12.12□□□□□ -0.47
RNF40-205ENST00000563909 IGKV1-16P04430 117 aa12.12□□□□□ -0.47
RNF40-205ENST00000563909 PHLDA2Q53GA4 152 aa12.12□□□□□ -0.47
RNF40-205ENST00000563909 TMEM177Q53S58 311 aa12.12□□□□□ -0.47
RNF40-205ENST00000563909 POC5Q8NA72 575 aa12.12□□□□□ -0.47
RNF40-205ENST00000563909 NPBQ8NG41 125 aa12.12□□□□□ -0.47
RNF40-205ENST00000563909 OSR1Q8TAX0 266 aaPredicted RBP12.12□□□□□ -0.47
RNF40-205ENST00000563909 MARCH1Q8TCQ1 289 aa12.12□□□□□ -0.47
RNF40-205ENST00000563909 RITA1Q96K30 269 aa12.12□□□□□ -0.47
RNF40-205ENST00000563909 GPHA2Q96T91 129 aa12.12□□□□□ -0.47
RNF40-205ENST00000563909 C7orf50Q9BRJ6 194 aaKnown RBP12.12□□□□□ -0.47
RNF40-205ENST00000563909 SHOXO15266 292 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 NDUFA3O95167 84 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 SPDEFO95238 335 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 CRYZL1O95825 349 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 RLN1P04808 185 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 CTSDP07339 412 aaPredicted RBP12.11□□□□□ -0.47
RNF40-205ENST00000563909 RND3P61587 244 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 GTSCR1Q86UQ5 136 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 SPAG16Q8N0X2 631 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 TCTEX1D1Q8N7M0 179 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 CCDC71LQ8N9Z2 235 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 OR13C8Q8NGS7 320 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 OR51H1Q8NH63 302 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 OR4S2Q8NH73 311 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 CD300LFQ8TDQ1 290 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 TPSG1Q9NRR2 321 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 GPR132Q9UNW8 380 aa12.11□□□□□ -0.47
RNF40-205ENST00000563909 C14orf166Q9Y224 244 aaKnown RBP12.11□□□□□ -0.47
RNF40-205ENST00000563909 NUPR2A6NF83 97 aa12.1□□□□□ -0.47
RNF40-205ENST00000563909 RBFOX2O43251 390 aaKnown RBP eCLIP12.1□□□□□ -0.47
RNF40-205ENST00000563909 MED14OSP0DP75 135 aa12.1□□□□□ -0.47
RNF40-205ENST00000563909 PIGPP57054 158 aa12.1□□□□□ -0.47
RNF40-205ENST00000563909 OR2B11Q5JQS5 317 aa12.1□□□□□ -0.47
RNF40-205ENST00000563909 TBC1D26Q86UD7 250 aa12.1□□□□□ -0.47
RNF40-205ENST00000563909 MRGPRFQ96AM1 343 aa12.1□□□□□ -0.47
RNF40-205ENST00000563909 SLC25A21Q9BQT8 299 aaPredicted RBP12.1□□□□□ -0.47
RNF40-205ENST00000563909 SLC2A9Q9NRM0 540 aa12.1□□□□□ -0.47
RNF40-205ENST00000563909 COPZ2Q9P299 210 aa12.1□□□□□ -0.47
RNF40-205ENST00000563909 PKHD1P08F94 4074 aa12.1□□□□□ -0.47
RNF40-205ENST00000563909 LINC00854A0A1B0GVQ3 168 aa12.09□□□□□ -0.47
RNF40-205ENST00000563909 RRHO14718 337 aa12.09□□□□□ -0.47
RNF40-205ENST00000563909 MPPED1O15442 326 aa12.09□□□□□ -0.47
RNF40-205ENST00000563909 HPRT1P00492 218 aa12.09□□□□□ -0.47
RNF40-205ENST00000563909 PI3P19957 117 aa12.09□□□□□ -0.47
RNF40-205ENST00000563909 F2RP25116 425 aa12.09□□□□□ -0.47
RNF40-205ENST00000563909 BRWD1-AS2P59051 145 aa12.09□□□□□ -0.47
RNF40-205ENST00000563909 PLGLAQ15195 96 aa12.09□□□□□ -0.47
RNF40-205ENST00000563909 PSG5Q15238 335 aa12.09□□□□□ -0.47
RNF40-205ENST00000563909 C5orf64Q2M2E5 130 aa12.09□□□□□ -0.47
RNF40-205ENST00000563909 VMA21Q3ZAQ7 101 aa12.09□□□□□ -0.47
RNF40-205ENST00000563909 LINC00322Q6ZN03 302 aaPredicted RBP12.09□□□□□ -0.47
RNF40-205ENST00000563909 AIFM2Q9BRQ8 373 aa12.09□□□□□ -0.47
RNF40-205ENST00000563909 FAM212BQ9NTI7 297 aaPredicted RBP12.09□□□□□ -0.47
RNF40-205ENST00000563909 VPS13DQ5THJ4 4388 aa12.09□□□□□ -0.47
RNF40-205ENST00000563909 TRAV41A0A0B4J266 112 aa12.08□□□□□ -0.48
RNF40-205ENST00000563909 ATP6V0E1O15342 81 aa12.08□□□□□ -0.48
RNF40-205ENST00000563909 HRASP01112 189 aa12.08□□□□□ -0.48
RNF40-205ENST00000563909 LGALS1P09382 135 aaKnown RBP12.08□□□□□ -0.48
RNF40-205ENST00000563909 LIN54Q6MZP7 749 aa12.08□□□□□ -0.48
RNF40-205ENST00000563909 RTBDNQ9BSG5 229 aaPredicted RBP12.08□□□□□ -0.48
RNF40-205ENST00000563909 PARP11Q9NR21 331 aa12.08□□□□□ -0.48
RNF40-205ENST00000563909 METTL1Q9UBP6 276 aaKnown RBP12.08□□□□□ -0.48
RNF40-205ENST00000563909 SRRM4A7MD48 611 aaKnown RBP12.07□□□□□ -0.48
RNF40-205ENST00000563909 H0Y980 276 aa12.07□□□□□ -0.48
RNF40-205ENST00000563909 PLA2G10O15496 165 aa12.07□□□□□ -0.48
RNF40-205ENST00000563909 LYRM1O43325 122 aa12.07□□□□□ -0.48
RNF40-205ENST00000563909 B3GALNT1O75752 331 aa12.07□□□□□ -0.48
RNF40-205ENST00000563909 UPK1BO75841 260 aa12.07□□□□□ -0.48
RNF40-205ENST00000563909 IGLV2-23P01705 113 aa12.07□□□□□ -0.48
RNF40-205ENST00000563909 UBE2KP61086 200 aa12.07□□□□□ -0.48
RNF40-205ENST00000563909 RBMS2Q15434 407 aaKnown RBP12.07□□□□□ -0.48
RNF40-205ENST00000563909 CEMP1Q6PRD7 247 aaPredicted RBP12.07□□□□□ -0.48
RNF40-205ENST00000563909 TEX45Q8NA69 505 aa12.07□□□□□ -0.48
RNF40-205ENST00000563909 VSTM2AQ8TAG5 236 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms