RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 SCAND1P57086 179 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 C15orf32Q32M92 178 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 PLAC9Q5JTB6 97 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 IDNKQ5T6J7 187 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 ZNF57Q68EA5 555 aaPredicted RBP7.61□□□□□ -1.19
SF3B3-204ENST00000563739 MOB1BQ7L9L4 216 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 CCDC190Q86UF4 302 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 GPHB5Q86YW7 130 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 TTC9CQ8N5M4 171 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 UXS1Q8NBZ7 420 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 ARHGAP5-AS1Q96IT6 56 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 ZNF430Q9H8G1 570 aaPredicted RBP7.61□□□□□ -1.19
SF3B3-204ENST00000563739 Q9N2K0 584 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 ABRACLQ9P1F3 81 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 UBQLN2Q9UHD9 624 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 HSF4Q9ULV5 492 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 ETV7Q9Y603 341 aa7.61□□□□□ -1.19
SF3B3-204ENST00000563739 HMX3A6NHT5 357 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 CGB1A6NKQ9 187 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 RAB27BO00194 218 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 GGCTO75223 188 aaKnown RBP7.6□□□□□ -1.19
SF3B3-204ENST00000563739 IL6RP08887 468 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-204ENST00000563739 TNFSF8P32971 234 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 TMEM50BP56557 158 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 UBE2KP61086 200 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 ATP5G2Q06055 141 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 ZNF124Q15973 351 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 TNXAQ16473 311 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 Q6ZNX1 250 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 GVQW1Q8N7I0 195 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.6□□□□□ -1.19
SF3B3-204ENST00000563739 NECAP1Q8NC96 275 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 OR10R2Q8NGX6 335 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 SLC25A38Q96DW6 304 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 PECRQ9BY49 303 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 PLEKHJ1Q9NW61 149 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 RHBDL2Q9NX52 303 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 RDH8Q9NYR8 311 aa7.6□□□□□ -1.19
SF3B3-204ENST00000563739 METTL21EPA6NDL7 271 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 MFSD2BA6NFX1 497 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 J3QL48 77 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 MFNGO00587 321 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 SAA1P0DJI8 122 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-204ENST00000563739 HIST1H1DP16402 221 aaKnown RBP7.59□□□□□ -1.19
SF3B3-204ENST00000563739 ZBTB25P24278 435 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 IFITM3Q01628 133 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 TAGLNQ01995 201 aaKnown RBP7.59□□□□□ -1.19
SF3B3-204ENST00000563739 RGS21Q2M5E4 152 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 SPANXN2Q5MJ10 180 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 ZNF575Q86XF7 245 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 TEX45Q8NA69 505 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 OR5H6Q8NGV6 325 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 SETD6Q8TBK2 473 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 AP3S1Q92572 193 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 RAB3CQ96E17 227 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 CABLES2Q9BTV7 478 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 ATG5Q9H1Y0 275 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 OR2D2Q9H210 308 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 C11orf68Q9H3H3 251 aaKnown RBP7.59□□□□□ -1.19
SF3B3-204ENST00000563739 MAP6D1Q9H9H5 199 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 CHMP1AQ9HD42 196 aaPredicted RBP7.59□□□□□ -1.19
SF3B3-204ENST00000563739 C12orf4Q9NQ89 552 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 ZNF221Q9UK13 617 aa7.59□□□□□ -1.19
SF3B3-204ENST00000563739 KIR2DL5BA0A0G2JN68 375 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 KIR2DL5BA0A0G2JPC4 375 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 RGS5O15539 181 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 UPK1BO75841 260 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 TUSC2O75896 110 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 SCGNO76038 276 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 MYOD1P15172 320 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 AREGP15514 252 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 GNB3P16520 340 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 MZT2AQ6P582 158 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 CLEC19AQ6UXS0 136 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 LINC00336Q6ZUF6 198 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 KIR2DL5AQ8N109 375 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 KIR2DL5BQ8NHK3 375 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 PHB2Q99623 299 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 CMSS1Q9BQ75 279 aaKnown RBP7.58□□□□□ -1.2
SF3B3-204ENST00000563739 MIXL1Q9H2W2 232 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 RIMS4Q9H426 269 aaPredicted RBP7.58□□□□□ -1.2
SF3B3-204ENST00000563739 SPATA2Q9UM82 520 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 KCNK7Q9Y2U2 307 aa7.58□□□□□ -1.2
SF3B3-204ENST00000563739 TRAV25A0A0B4J276 109 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 UBE2CO00762 179 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 SHOXO15266 292 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 CRYZL1O95825 349 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 RPL35AP18077 110 aaKnown RBP7.57□□□□□ -1.2
SF3B3-204ENST00000563739 DUTP33316 252 aaKnown RBP7.57□□□□□ -1.2
SF3B3-204ENST00000563739 ARL3P36405 182 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 APOC4P55056 127 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 BRWD1-AS2P59051 145 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 ARL6IP1Q15041 203 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 IGSF11Q5DX21 431 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 UBE2NLQ5JXB2 153 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 SNX29P2Q8IUI4 249 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 LYSMD2Q8IV50 215 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 CENPSQ8N2Z9 138 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 OR1L6Q8NGR2 347 aa7.57□□□□□ -1.2
SF3B3-204ENST00000563739 ACOT12Q8WYK0 555 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms