RNA–Protein interactions for RNA: ENST00000563554.1

AC009163.3-201, humanhuman

TSL 3 BASIC

Gene AC009163.3, Length 852 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009163.3-201ENST00000563554 FYTTD1Q96QD9 318 aaKnown RBP11.04□□□□□ -0.64
AC009163.3-201ENST00000563554 TSC22D3Q99576 134 aa11.04□□□□□ -0.64
AC009163.3-201ENST00000563554 C20orf85Q9H1P6 137 aa11.04□□□□□ -0.64
AC009163.3-201ENST00000563554 PRR13Q9NZ81 148 aa11.04□□□□□ -0.64
AC009163.3-201ENST00000563554 FOXA2Q9Y261 457 aaPredicted RBP11.04□□□□□ -0.64
AC009163.3-201ENST00000563554 TCRBV4S1A1TA0A5B7 111 aa11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 IGKV1-5P01602 117 aa11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 IGHG4P01861 327 aa11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 IL6RP08887 468 aaPredicted RBP11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 MYOD1P15172 320 aa11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 SUPT4H1P63272 117 aaKnown RBP11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 AKIRIN2Q53H80 203 aa11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 C19orf54Q5BKX5 351 aa11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 LHFPL5Q8TAF8 219 aa11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 GLYATL2Q8WU03 294 aa11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 RBPMSQ93062 196 aaKnown RBP11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 SPIN2AQ99865 258 aa11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 CITED2Q99967 270 aaPredicted RBP11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 SPIN2BQ9BPZ2 258 aa11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 COMMD5Q9GZQ3 224 aa11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 FLVCR2Q9UPI3 526 aa11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 NSG2Q9Y328 171 aa11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 NUBP2Q9Y5Y2 271 aa11.03□□□□□ -0.64
AC009163.3-201ENST00000563554 FAM240BA0A1B0GVZ2 78 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 A0A1W2PRX2 142 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 MSGN1A6NI15 193 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 C15orf61A6NNL5 157 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 RBMXL2O75526 392 aaKnown RBP11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 CDS2O95674 445 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 ELANEP08246 267 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 FGF2P09038 288 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 PF4V1P10720 104 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 PPIFP30405 207 aaKnown RBP11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 SLC6A1P30531 599 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 UBE2MP61081 183 aaKnown RBP11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 SRPXP78539 464 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 FOXE3Q13461 319 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 PPP1R1AQ13522 171 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 TMEM187Q14656 261 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 NSUN5P1Q3KNT7 163 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 TCTEX1D4Q5JR98 221 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 LCNL1Q6ZST4 164 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 SLC25A42Q86VD7 318 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 MINDY2Q8NBR6 621 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 OR5M8Q8NGP6 311 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 OR4A16Q8NH70 328 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 ENKURQ8TC29 256 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 CASTOR1Q8WTX7 329 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 RRNAD1Q96FB5 475 aaKnown RBP11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 COA4Q9NYJ1 87 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 PRNDQ9UKY0 176 aa11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 TSSC4Q9Y5U2 329 aaPredicted RBP11.02□□□□□ -0.65
AC009163.3-201ENST00000563554 CMYA5Q8N3K9 4069 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 TRAV6A0A075B6T7 132 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 A0A1B0GW64 132 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 HMX3A6NHT5 357 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 M0QZ24 198 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 SOX15O60248 233 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 SFT2D2O95562 160 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 HLA-AP01891 365 aaKnown RBP11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 TCRBP04435 133 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 RPLP1P05386 114 aaKnown RBP11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 P0C879 139 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 SPNP16150 400 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 PSMB8P28062 276 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 DEFA1P59665 94 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 DEFA3P59666 94 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 CD83Q01151 205 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 C2orf68Q2NKX9 166 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 ASPHD1Q5U4P2 390 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 TMEM65Q6PI78 240 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 NDUFA11Q86Y39 141 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 SELENOHQ8IZQ5 122 aaKnown RBP11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 CADM3Q8N126 398 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 LGI3Q8N145 548 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 SLC35G3Q8N808 338 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 FAM110DQ8TAY7 271 aaPredicted RBP11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 IL22RA2Q969J5 263 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 TMEM68Q96MH6 324 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 ZNF355PQ9NSJ1 428 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 NUDT15Q9NV35 164 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 OR51B2Q9Y5P1 312 aa11.01□□□□□ -0.65
AC009163.3-201ENST00000563554 A0A0G2JRQ6 117 aa11□□□□□ -0.65
AC009163.3-201ENST00000563554 TEX22C9J3V5 150 aa11□□□□□ -0.65
AC009163.3-201ENST00000563554 IGLV1-40P01703 118 aa11□□□□□ -0.65
AC009163.3-201ENST00000563554 OR4E1P0C645 316 aa11□□□□□ -0.65
AC009163.3-201ENST00000563554 ANXA7P20073 488 aaKnown RBP11□□□□□ -0.65
AC009163.3-201ENST00000563554 RPL23AP62750 156 aaKnown RBP11□□□□□ -0.65
AC009163.3-201ENST00000563554 IZUMO4Q1ZYL8 232 aa11□□□□□ -0.65
AC009163.3-201ENST00000563554 C4orf46Q504U0 113 aa11□□□□□ -0.65
AC009163.3-201ENST00000563554 THOC7Q6I9Y2 204 aaKnown RBP11□□□□□ -0.65
AC009163.3-201ENST00000563554 FAM219AQ8IW50 185 aa11□□□□□ -0.65
AC009163.3-201ENST00000563554 OR5T1Q8NG75 326 aa11□□□□□ -0.65
AC009163.3-201ENST00000563554 TMEM56Q96MV1 263 aa11□□□□□ -0.65
AC009163.3-201ENST00000563554 HINT2Q9BX68 163 aa11□□□□□ -0.65
AC009163.3-201ENST00000563554 QTRT1Q9BXR0 403 aaKnown RBP11□□□□□ -0.65
AC009163.3-201ENST00000563554 FKBP11Q9NYL4 201 aa11□□□□□ -0.65
AC009163.3-201ENST00000563554 TMEM56-RWDD3S4R434 201 aa11□□□□□ -0.65
AC009163.3-201ENST00000563554 PIGBOS1A0A0B4J2F0 54 aa10.99□□□□□ -0.65
AC009163.3-201ENST00000563554 CGB1A6NKQ9 187 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms