RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 CX3CL1P78423 397 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 HTD2P86397 168 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 SCGB2A2Q13296 93 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 PDGFRLQ15198 375 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 RTL8BQ17RB0 113 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 KRTAP24-1Q3LI83 254 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 C10orf128Q5T292 105 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 BVES-AS1Q5T3Y7 98 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 UFSP1Q6NVU6 142 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 WDR74Q6RFH5 385 aaPredicted RBP2.9□□□□□ -1.95
LINC01416-201ENST00000563553 C17orf99Q6UX52 265 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 MOB1BQ7L9L4 216 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 NEGR1Q7Z3B1 354 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 FAM58AQ8N1B3 248 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 FER1L6-AS1Q8NA97 138 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 OR11L1Q8NGX0 322 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 ZNF596Q8TC21 504 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 TMEM190Q8WZ59 177 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 SPTSSAQ969W0 71 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 ADIPOR1Q96A54 375 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 GUCD1Q96NT3 240 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 FOXN4Q96NZ1 517 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 OR4C12Q96R67 309 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 COMMD5Q9GZQ3 224 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 VSIRQ9H7M9 311 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 GNB4Q9HAV0 340 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 HES4Q9HCC6 221 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 PLEK2Q9NYT0 353 aa2.9□□□□□ -1.95
LINC01416-201ENST00000563553 ATG2AQ2TAZ0 1938 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 A0A0G2JNG1 304 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 TMEM189A5PLL7 270 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 SLC22A20A6NK97 555 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 SNURFLB1AK76 121 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 H3BRM9 83 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 J3QR89 54 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 K7EP34 96 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 PAGE4O60829 102 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 PGLYRP1O75594 196 aaPredicted RBP2.89□□□□□ -1.95
LINC01416-201ENST00000563553 CXorf1O96002 111 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 NAPSAO96009 420 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 IGKV3-11P04433 115 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 SERPINE2P07093 398 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 HLA-DOBP13765 273 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 CRYBB3P26998 211 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 GDF1P27539 372 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 LGALS7P47929 136 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 RBM11P57052 281 aaKnown RBP2.89□□□□□ -1.95
LINC01416-201ENST00000563553 POU3F1Q03052 451 aaPredicted RBP2.89□□□□□ -1.95
LINC01416-201ENST00000563553 GPM6BQ13491 265 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 KIR2DS5Q14953 304 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 POM121L1PQ3SYA9 428 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 TSPO2Q5TGU0 170 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 SLC25A34Q6PIV7 304 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 TMEM136Q6ZRR5 245 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 HAPLN4Q86UW8 402 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 GAPTQ8N292 157 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 C17orf78Q8N4C9 275 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 WDR31Q8NA23 367 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 SUMF1Q8NBK3 374 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 ZNF439Q8NDP4 499 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 ST6GALNAC3Q8NDV1 305 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 RNF138Q8WVD3 245 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 OR1E3Q8WZA6 343 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 APOBEC3DQ96AK3 386 aaPredicted RBP2.89□□□□□ -1.95
LINC01416-201ENST00000563553 TMEM186Q96B77 213 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 CHCHD1Q96BP2 118 aaKnown RBP2.89□□□□□ -1.95
LINC01416-201ENST00000563553 GRAMD2BQ96HH9 432 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 ZNF160Q9HCG1 818 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 MBNL1Q9NR56 388 aaKnown RBP2.89□□□□□ -1.95
LINC01416-201ENST00000563553 WNT16Q9UBV4 365 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 COPS7AQ9UBW8 275 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 PIGLQ9Y2B2 252 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 RFNGQ9Y644 331 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 KIF26BQ2KJY2 2108 aa2.89□□□□□ -1.95
LINC01416-201ENST00000563553 IGLV3-32A0A0A0MS00 114 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 GRIFINA4D1Z8 144 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 GAGE12JA6NER3 117 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 FAM90A9PA6NNJ1 464 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 C17orf105B2RV13 164 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 H3BMH7 237 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 ISLRO14498 428 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 TNFSF11O14788 317 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 SIVA1O15304 175 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 OR2J3O76001 311 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 WISP2O76076 250 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 HNRNPA1P09651 372 aaKnown RBP eCLIP2.88□□□□□ -1.95
LINC01416-201ENST00000563553 LINC00271P0C7V0 271 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 CBLN1P23435 193 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 DRD3P35462 400 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 ZNF83P51522 516 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 GPM6AP51674 278 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 METAP1P53582 386 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 PLCXD2Q0VAA5 305 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 KRTAP27-1Q3LI81 207 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 KRTCAP3Q53RY4 240 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 PRAMEF20Q5VT98 475 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 RHBDD2Q6NTF9 364 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 ZNF818PQ6ZRF7 136 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 FA2HQ7L5A8 372 aa2.88□□□□□ -1.95
LINC01416-201ENST00000563553 PRSS41Q7RTY9 318 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms