RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 HILPDAQ9Y5L2 63 aa14.55□□□□□ -0.08
COMMD4-208ENST00000563220 OR51B2Q9Y5P1 312 aa14.55□□□□□ -0.08
COMMD4-208ENST00000563220 KBTBD11O94819 623 aa14.54□□□□□ -0.08
COMMD4-208ENST00000563220 PAX6P26367 422 aa14.54□□□□□ -0.08
COMMD4-208ENST00000563220 CLEC12BQ2HXU8 276 aa14.54□□□□□ -0.08
COMMD4-208ENST00000563220 PLA2G2EQ9NZK7 142 aa14.54□□□□□ -0.08
COMMD4-208ENST00000563220 PRNDQ9UKY0 176 aa14.54□□□□□ -0.08
COMMD4-208ENST00000563220 PTPN13Q12923 2485 aa14.53□□□□□ -0.08
COMMD4-208ENST00000563220 BORCS7-ASMTA0A0B4J1R7 106 aa14.53□□□□□ -0.08
COMMD4-208ENST00000563220 FBXO24O75426 580 aa14.53□□□□□ -0.08
COMMD4-208ENST00000563220 HIST2H2BCQ6DN03 193 aa14.53□□□□□ -0.08
COMMD4-208ENST00000563220 IL34Q6ZMJ4 242 aa14.53□□□□□ -0.08
COMMD4-208ENST00000563220 STRAPQ9Y3F4 350 aaKnown RBP14.53□□□□□ -0.08
COMMD4-208ENST00000563220 TMEM218A2RU14 115 aa14.52□□□□□ -0.08
COMMD4-208ENST00000563220 PMS2P5A8MQ11 134 aa14.52□□□□□ -0.08
COMMD4-208ENST00000563220 TIMM23O14925 209 aa14.52□□□□□ -0.08
COMMD4-208ENST00000563220 OPN1MWP04001 364 aa14.52□□□□□ -0.08
COMMD4-208ENST00000563220 OPN1MW2P0DN77 364 aa14.52□□□□□ -0.08
COMMD4-208ENST00000563220 OPN1MW3P0DN78 364 aa14.52□□□□□ -0.08
COMMD4-208ENST00000563220 LGALS7P47929 136 aa14.52□□□□□ -0.08
COMMD4-208ENST00000563220 PAX8Q06710 450 aa14.52□□□□□ -0.08
COMMD4-208ENST00000563220 GINS3Q9BRX5 216 aa14.52□□□□□ -0.08
COMMD4-208ENST00000563220 CSMD2Q7Z408 3487 aa14.52□□□□□ -0.08
COMMD4-208ENST00000563220 CENPEQ02224 2701 aa14.52□□□□□ -0.08
COMMD4-208ENST00000563220 WNK2Q9Y3S1 2297 aa14.52□□□□□ -0.09
COMMD4-208ENST00000563220 TEX50A0A1B0GTY4 177 aa14.52□□□□□ -0.09
COMMD4-208ENST00000563220 TSPAN4O14817 238 aa14.52□□□□□ -0.09
COMMD4-208ENST00000563220 CNTFRP26992 372 aa14.52□□□□□ -0.09
COMMD4-208ENST00000563220 CEACAM3P40198 252 aa14.52□□□□□ -0.09
COMMD4-208ENST00000563220 SMUG1Q53HV7 270 aa14.52□□□□□ -0.09
COMMD4-208ENST00000563220 ATRAIDQ6UW56 229 aa14.52□□□□□ -0.09
COMMD4-208ENST00000563220 DYNAPQ8N1N2 210 aa14.52□□□□□ -0.09
COMMD4-208ENST00000563220 TMEM167AQ8TBQ9 72 aa14.52□□□□□ -0.09
COMMD4-208ENST00000563220 CACFD1Q9UGQ2 172 aa14.52□□□□□ -0.09
COMMD4-208ENST00000563220 C15orf62A8K5M9 175 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 TRIM77I1YAP6 450 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 SLC25A17O43808 307 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 UBE2E1P51965 193 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 ZNF266Q14584 549 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 MRGPRG-AS1Q2M3A8 158 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 C10orf91Q5T1B1 145 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 OR8G2PQ6IF36 304 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 HSD17B11Q8NBQ5 300 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 VSTM2AQ8TAG5 236 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 CFHR4Q92496 578 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 ATP5SQ99766 215 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 HEYLQ9NQ87 328 aaPredicted RBP14.51□□□□□ -0.09
COMMD4-208ENST00000563220 TPSG1Q9NRR2 321 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 ZNF257Q9Y2Q1 563 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 POLQO75417 2590 aa14.51□□□□□ -0.09
COMMD4-208ENST00000563220 DNASE2O00115 360 aaPredicted RBP14.5□□□□□ -0.09
COMMD4-208ENST00000563220 HOXA1P49639 335 aaPredicted RBP14.5□□□□□ -0.09
COMMD4-208ENST00000563220 SSX2Q16385 188 aa14.5□□□□□ -0.09
COMMD4-208ENST00000563220 VMA21Q3ZAQ7 101 aa14.5□□□□□ -0.09
COMMD4-208ENST00000563220 OR4A5Q8NH83 315 aa14.5□□□□□ -0.09
COMMD4-208ENST00000563220 HIPK2Q9H2X6 1198 aa14.5□□□□□ -0.09
COMMD4-208ENST00000563220 RFNGQ9Y644 331 aa14.5□□□□□ -0.09
COMMD4-208ENST00000563220 VENTXO95231 258 aa14.5□□□□□ -0.09
COMMD4-208ENST00000563220 USF1P22415 310 aaPredicted RBP14.5□□□□□ -0.09
COMMD4-208ENST00000563220 RPL8P62917 257 aaKnown RBP14.5□□□□□ -0.09
COMMD4-208ENST00000563220 PJVKQ0ZLH3 352 aa14.5□□□□□ -0.09
COMMD4-208ENST00000563220 MINOS1Q5TGZ0 78 aa14.5□□□□□ -0.09
COMMD4-208ENST00000563220 HINT2Q9BX68 163 aa14.5□□□□□ -0.09
COMMD4-208ENST00000563220 SH3BGRL3Q9H299 93 aa14.5□□□□□ -0.09
COMMD4-208ENST00000563220 ZNF430Q9H8G1 570 aaPredicted RBP14.5□□□□□ -0.09
COMMD4-208ENST00000563220 FKBP11Q9NYL4 201 aa14.5□□□□□ -0.09
COMMD4-208ENST00000563220 MINOS1-NBL1R4GNA1 71 aa14.5□□□□□ -0.09
COMMD4-208ENST00000563220 TET2Q6N021 2002 aaPredicted RBP14.5□□□□□ -0.09
COMMD4-208ENST00000563220 DOPEY2Q9Y3R5 2298 aa14.5□□□□□ -0.09
COMMD4-208ENST00000563220 TNCP24821 2201 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 E7EUB6 86 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 LY86O95711 162 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 CRYGBP07316 175 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 SPP1P10451 314 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 SLC25A16P16260 332 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 ATF4P18848 351 aaPredicted RBP14.49□□□□□ -0.09
COMMD4-208ENST00000563220 CD1BP29016 333 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 LGALS4P56470 323 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 HBG1P69891 147 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 HBG2P69892 147 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 PRCDQ00LT1 54 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 DEFA5Q01523 94 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 HABP2Q14520 560 aaPredicted RBP14.49□□□□□ -0.09
COMMD4-208ENST00000563220 PSG5Q15238 335 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 THNSL2Q86YJ6 484 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 OR5B3Q8NH48 314 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 TMEM170AQ8WVE7 144 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 NARS2Q96I59 477 aaKnown RBP14.49□□□□□ -0.09
COMMD4-208ENST00000563220 AJUBAQ96IF1 538 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 TSNAXQ99598 290 aaKnown RBP14.49□□□□□ -0.09
COMMD4-208ENST00000563220 NKX6-2Q9C056 277 aaPredicted RBP14.49□□□□□ -0.09
COMMD4-208ENST00000563220 CARHSP1Q9Y2V2 147 aaKnown RBP14.49□□□□□ -0.09
COMMD4-208ENST00000563220 ABCA2Q9BZC7 2435 aa14.49□□□□□ -0.09
COMMD4-208ENST00000563220 A0A096LNT2 108 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 RRHO14718 337 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 DFFBO76075 338 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 IFNA10P01566 189 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 ATP6V0CP27449 155 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 SULT1A2P50226 295 aa14.48□□□□□ -0.09
COMMD4-208ENST00000563220 SLC38A11Q08AI6 406 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms