RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 A0A1B0GW64 132 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 GGCTO75223 188 aaKnown RBP12.83□□□□□ -0.36
CLK3-210ENST00000563112 PGLYRP1O75594 196 aaPredicted RBP12.83□□□□□ -0.36
CLK3-210ENST00000563112 S1PR2O95136 353 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 RLN1P04808 185 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 MYOD1P15172 320 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 CTRB1P17538 263 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 F2RP25116 425 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 HLA-DMAP28067 261 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 S100GP29377 79 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 HRH1P35367 487 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 OR2B8PP59922 312 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 CTRB2Q6GPI1 263 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 LPCAT3Q6P1A2 487 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 SNX29P2Q8IUI4 249 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 Q8N402 240 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 OR2K2Q8NGT1 345 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 GPX8Q8TED1 209 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 EEF1AKMT3Q96AZ1 226 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 ZMAT4Q9H898 229 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 TMEM140Q9NV12 185 aa12.83□□□□□ -0.36
CLK3-210ENST00000563112 GPR31O00270 319 aa12.82□□□□□ -0.36
CLK3-210ENST00000563112 CYB5BO43169 146 aa12.82□□□□□ -0.36
CLK3-210ENST00000563112 NDUFB8O95169 186 aa12.82□□□□□ -0.36
CLK3-210ENST00000563112 FGF2P09038 288 aa12.82□□□□□ -0.36
CLK3-210ENST00000563112 THOC7Q6I9Y2 204 aaKnown RBP12.82□□□□□ -0.36
CLK3-210ENST00000563112 C19orf35Q6ZS72 473 aa12.82□□□□□ -0.36
CLK3-210ENST00000563112 GTSCR1Q86UQ5 136 aa12.82□□□□□ -0.36
CLK3-210ENST00000563112 LYSMD2Q8IV50 215 aa12.82□□□□□ -0.36
CLK3-210ENST00000563112 Q8N1Y9 231 aa12.82□□□□□ -0.36
CLK3-210ENST00000563112 AP3S1Q92572 193 aa12.82□□□□□ -0.36
CLK3-210ENST00000563112 FANCD2OSQ96PS1 177 aa12.82□□□□□ -0.36
CLK3-210ENST00000563112 SRSF8Q9BRL6 282 aaKnown RBP12.82□□□□□ -0.36
CLK3-210ENST00000563112 TRAV3A0A0B4J244 114 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 FAM25AB3EWG3 89 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 FAM25CB3EWG5 89 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 FAM25GB3EWG6 89 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 PPP5D1E7EU14 171 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 HPGDSO60760 199 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 REG1AP05451 166 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 IGHV4-30-4P0DP06 118 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 RPA2P15927 270 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 ELK1P19419 428 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 RCVRNP35243 200 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 ARL3P36405 182 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 LPAR6P43657 344 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 KLK9Q2XQG4 91 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 CLEC19AQ6UXS0 136 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 DYNLRB2Q8TF09 96 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 DGCR14Q96DF8 476 aaKnown RBP12.81□□□□□ -0.36
CLK3-210ENST00000563112 CXorf58Q96LI9 332 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 QTRT1Q9BXR0 403 aaKnown RBP12.81□□□□□ -0.36
CLK3-210ENST00000563112 THYN1Q9P016 225 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 KLK9Q9UKQ9 250 aa12.81□□□□□ -0.36
CLK3-210ENST00000563112 CGB1A6NKQ9 187 aa12.8□□□□□ -0.36
CLK3-210ENST00000563112 MARCH11A6NNE9 402 aa12.8□□□□□ -0.36
CLK3-210ENST00000563112 A8MZ25 164 aa12.8□□□□□ -0.36
CLK3-210ENST00000563112 SNAPC5O75971 98 aa12.8□□□□□ -0.36
CLK3-210ENST00000563112 OR2C1O95371 312 aa12.8□□□□□ -0.36
CLK3-210ENST00000563112 IGHV3-23P01764 117 aa12.8□□□□□ -0.36
CLK3-210ENST00000563112 FAM106AQ4KMX7 169 aa12.8□□□□□ -0.36
CLK3-210ENST00000563112 HSD17B13Q7Z5P4 300 aaPredicted RBP12.8□□□□□ -0.36
CLK3-210ENST00000563112 GPHB5Q86YW7 130 aa12.8□□□□□ -0.36
CLK3-210ENST00000563112 RCHY1Q96PM5 261 aa12.8□□□□□ -0.36
CLK3-210ENST00000563112 FXYD6Q9H0Q3 95 aa12.8□□□□□ -0.36
CLK3-210ENST00000563112 IGLV11-55A0A075B6I3 123 aa12.79□□□□□ -0.36
CLK3-210ENST00000563112 TRBV7-1A0A0A6YYK4 115 aa12.79□□□□□ -0.36
CLK3-210ENST00000563112 IGLC7A0M8Q6 106 aa12.79□□□□□ -0.36
CLK3-210ENST00000563112 LGALS9O00182 355 aa12.79□□□□□ -0.36
CLK3-210ENST00000563112 KRASP01116 189 aa12.79□□□□□ -0.36
CLK3-210ENST00000563112 HLA-AP01891 365 aaKnown RBP12.79□□□□□ -0.36
CLK3-210ENST00000563112 TRAPPC2P0DI81 140 aa12.79□□□□□ -0.36
CLK3-210ENST00000563112 TRAPPC2BP0DI82 140 aa12.79□□□□□ -0.36
CLK3-210ENST00000563112 ZNF182P17025 639 aaPredicted RBP12.79□□□□□ -0.36
CLK3-210ENST00000563112 OR1L8Q8NGR8 309 aa12.79□□□□□ -0.36
CLK3-210ENST00000563112 FCAMRQ8WWV6 532 aa12.79□□□□□ -0.36
CLK3-210ENST00000563112 DMRT1Q9Y5R6 373 aa12.79□□□□□ -0.36
CLK3-210ENST00000563112 S4R3C0 116 aa12.79□□□□□ -0.36
CLK3-210ENST00000563112 TEX50A0A1B0GTY4 177 aa12.78□□□□□ -0.36
CLK3-210ENST00000563112 GABARAPO95166 117 aa12.78□□□□□ -0.36
CLK3-210ENST00000563112 SMIM18P0DKX4 95 aa12.78□□□□□ -0.36
CLK3-210ENST00000563112 MECP2P51608 486 aaKnown RBP12.78□□□□□ -0.36
CLK3-210ENST00000563112 CTF1Q16619 201 aa12.78□□□□□ -0.36
CLK3-210ENST00000563112 PHLDA2Q53GA4 152 aa12.78□□□□□ -0.36
CLK3-210ENST00000563112 GPR107Q5VW38 600 aa12.78□□□□□ -0.36
CLK3-210ENST00000563112 CADM3Q8N126 398 aa12.78□□□□□ -0.36
CLK3-210ENST00000563112 CCDC140Q96MF4 163 aa12.78□□□□□ -0.36
CLK3-210ENST00000563112 HINT2Q9BX68 163 aa12.78□□□□□ -0.36
CLK3-210ENST00000563112 NAA50Q9GZZ1 169 aaKnown RBP12.78□□□□□ -0.36
CLK3-210ENST00000563112 TUBA4BQ9H853 241 aa12.78□□□□□ -0.36
CLK3-210ENST00000563112 C19orf73Q9NVV2 129 aa12.78□□□□□ -0.36
CLK3-210ENST00000563112 TECRQ9NZ01 308 aaKnown RBP12.78□□□□□ -0.36
CLK3-210ENST00000563112 ZNF320A2RRD8 509 aa12.77□□□□□ -0.37
CLK3-210ENST00000563112 IZUMO1RA6ND01 250 aa12.77□□□□□ -0.37
CLK3-210ENST00000563112 C2orf70A6NJV1 201 aa12.77□□□□□ -0.37
CLK3-210ENST00000563112 IFNA6P05013 189 aa12.77□□□□□ -0.37
CLK3-210ENST00000563112 CLEC3BP05452 202 aa12.77□□□□□ -0.37
CLK3-210ENST00000563112 OR13C7P0DN81 318 aa12.77□□□□□ -0.37
CLK3-210ENST00000563112 FOLR2P14207 255 aa12.77□□□□□ -0.37
CLK3-210ENST00000563112 G6PCP35575 357 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms