RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 PSMB11A5LHX3 300 aa14.83□□□□□ -0.04
RAB40C-207ENST00000563109 DUS4LO95620 317 aaKnown RBP14.83□□□□□ -0.04
RAB40C-207ENST00000563109 IL6RP08887 468 aaPredicted RBP14.83□□□□□ -0.04
RAB40C-207ENST00000563109 OR2B8PP59922 312 aa14.83□□□□□ -0.04
RAB40C-207ENST00000563109 TMEM267Q0VDI3 215 aaPredicted RBP14.83□□□□□ -0.04
RAB40C-207ENST00000563109 MRGPRG-AS1Q2M3A8 158 aa14.83□□□□□ -0.04
RAB40C-207ENST00000563109 CENPVQ7Z7K6 275 aaPredicted RBP14.83□□□□□ -0.04
RAB40C-207ENST00000563109 LRTM2Q8N967 370 aa14.83□□□□□ -0.04
RAB40C-207ENST00000563109 SGMS2Q8NHU3 365 aa14.83□□□□□ -0.04
RAB40C-207ENST00000563109 LSM10Q969L4 123 aaKnown RBP14.83□□□□□ -0.04
RAB40C-207ENST00000563109 FAM103A1Q9BTL3 118 aaKnown RBP14.83□□□□□ -0.04
RAB40C-207ENST00000563109 SHPKQ9UHJ6 478 aa14.83□□□□□ -0.04
RAB40C-207ENST00000563109 C15orf61A6NNL5 157 aa14.82□□□□□ -0.04
RAB40C-207ENST00000563109 INMT-MINDY4F8WBC2 141 aa14.82□□□□□ -0.04
RAB40C-207ENST00000563109 CRIP2P52943 208 aaPredicted RBP14.82□□□□□ -0.04
RAB40C-207ENST00000563109 SSBP2P81877 361 aaPredicted RBP14.82□□□□□ -0.04
RAB40C-207ENST00000563109 RGS21Q2M5E4 152 aa14.82□□□□□ -0.04
RAB40C-207ENST00000563109 C10orf55Q5SWW7 151 aa14.82□□□□□ -0.04
RAB40C-207ENST00000563109 SPIN2AQ99865 258 aa14.82□□□□□ -0.04
RAB40C-207ENST00000563109 SPIN2BQ9BPZ2 258 aa14.82□□□□□ -0.04
RAB40C-207ENST00000563109 WNT10AQ9GZT5 417 aa14.82□□□□□ -0.04
RAB40C-207ENST00000563109 GPN1Q9HCN4 374 aaPredicted RBP14.82□□□□□ -0.04
RAB40C-207ENST00000563109 NSG2Q9Y328 171 aa14.82□□□□□ -0.04
RAB40C-207ENST00000563109 OR51B2Q9Y5P1 312 aa14.82□□□□□ -0.04
RAB40C-207ENST00000563109 WSB1Q9Y6I7 421 aa14.82□□□□□ -0.04
RAB40C-207ENST00000563109 PRAF2O60831 178 aa14.81□□□□□ -0.04
RAB40C-207ENST00000563109 DHFRP00374 187 aa14.81□□□□□ -0.04
RAB40C-207ENST00000563109 IL5P05113 134 aa14.81□□□□□ -0.04
RAB40C-207ENST00000563109 P0C879 139 aa14.81□□□□□ -0.04
RAB40C-207ENST00000563109 THOC7Q6I9Y2 204 aaKnown RBP14.81□□□□□ -0.04
RAB40C-207ENST00000563109 UNQ5815/PRO19632Q6UWF5 114 aa14.81□□□□□ -0.04
RAB40C-207ENST00000563109 LYZL2Q7Z4W2 148 aa14.81□□□□□ -0.04
RAB40C-207ENST00000563109 OR52B4Q8NGK2 314 aa14.81□□□□□ -0.04
RAB40C-207ENST00000563109 ZNF431Q8TF32 576 aaPredicted RBP14.81□□□□□ -0.04
RAB40C-207ENST00000563109 WFDC12Q8WWY7 111 aa14.81□□□□□ -0.04
RAB40C-207ENST00000563109 FYTTD1Q96QD9 318 aaKnown RBP14.81□□□□□ -0.04
RAB40C-207ENST00000563109 SEC22CQ9BRL7 303 aa14.81□□□□□ -0.04
RAB40C-207ENST00000563109 MARVELD1Q9BSK0 173 aa14.81□□□□□ -0.04
RAB40C-207ENST00000563109 PDCD10Q9BUL8 212 aa14.81□□□□□ -0.04
RAB40C-207ENST00000563109 FOXA2Q9Y261 457 aaPredicted RBP14.81□□□□□ -0.04
RAB40C-207ENST00000563109 FBXO7Q9Y3I1 522 aa14.81□□□□□ -0.04
RAB40C-207ENST00000563109 MSGN1A6NI15 193 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 OPN1MWP04001 364 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 OPN1MW2P0DN77 364 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 OPN1MW3P0DN78 364 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 AKIRIN2Q53H80 203 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 LFNGQ8NES3 379 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 OR4X2Q8NGF9 303 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 OR1L8Q8NGR8 309 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 OR5B3Q8NH48 314 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 MITD1Q8WV92 249 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 TMEM68Q96MH6 324 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 QTRT1Q9BXR0 403 aaKnown RBP14.8□□□□□ -0.04
RAB40C-207ENST00000563109 TMEM14BQ9NUH8 114 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 CACNG5Q9UF02 275 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 TMED3Q9Y3Q3 217 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 ATRQ13535 2644 aa14.8□□□□□ -0.04
RAB40C-207ENST00000563109 A0A0G2JRQ6 117 aa14.79□□□□□ -0.04
RAB40C-207ENST00000563109 G3V318 75 aa14.79□□□□□ -0.04
RAB40C-207ENST00000563109 PLXNB1O43157 2135 aa14.79□□□□□ -0.04
RAB40C-207ENST00000563109 SULT1A3P0DMM9 295 aa14.79□□□□□ -0.04
RAB40C-207ENST00000563109 SULT1A4P0DMN0 295 aa14.79□□□□□ -0.04
RAB40C-207ENST00000563109 EGR2P11161 476 aaPredicted RBP14.79□□□□□ -0.04
RAB40C-207ENST00000563109 MYOD1P15172 320 aa14.79□□□□□ -0.04
RAB40C-207ENST00000563109 SPNP16150 400 aa14.79□□□□□ -0.04
RAB40C-207ENST00000563109 IZUMO4Q1ZYL8 232 aa14.79□□□□□ -0.04
RAB40C-207ENST00000563109 MRPL41Q8IXM3 137 aaKnown RBP14.79□□□□□ -0.04
RAB40C-207ENST00000563109 COMMD1Q8N668 190 aa14.79□□□□□ -0.04
RAB40C-207ENST00000563109 C3orf56Q8N813 242 aa14.79□□□□□ -0.04
RAB40C-207ENST00000563109 OR5AU1Q8NGC0 362 aa14.79□□□□□ -0.04
RAB40C-207ENST00000563109 GPR146Q96CH1 333 aa14.79□□□□□ -0.04
RAB40C-207ENST00000563109 MDFIQ99750 246 aa14.79□□□□□ -0.04
RAB40C-207ENST00000563109 ZNF257Q9Y2Q1 563 aa14.79□□□□□ -0.04
RAB40C-207ENST00000563109 A0A1W2PN81 502 aa14.78□□□□□ -0.04
RAB40C-207ENST00000563109 IFNA21P01568 189 aa14.78□□□□□ -0.04
RAB40C-207ENST00000563109 HOXB5P09067 269 aa14.78□□□□□ -0.04
RAB40C-207ENST00000563109 TRAPPC2P0DI81 140 aa14.78□□□□□ -0.04
RAB40C-207ENST00000563109 TRAPPC2BP0DI82 140 aa14.78□□□□□ -0.04
RAB40C-207ENST00000563109 CHRNA7P36544 502 aa14.78□□□□□ -0.04
RAB40C-207ENST00000563109 NMSQ5H8A3 153 aa14.78□□□□□ -0.04
RAB40C-207ENST00000563109 ZNF329Q86UD4 541 aa14.78□□□□□ -0.04
RAB40C-207ENST00000563109 ZNF429Q86V71 674 aa14.78□□□□□ -0.04
RAB40C-207ENST00000563109 OR5M8Q8NGP6 311 aa14.78□□□□□ -0.04
RAB40C-207ENST00000563109 SRSF8Q9BRL6 282 aaKnown RBP14.78□□□□□ -0.04
RAB40C-207ENST00000563109 HINT2Q9BX68 163 aa14.78□□□□□ -0.04
RAB40C-207ENST00000563109 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.78□□□□□ -0.04
RAB40C-207ENST00000563109 CACFD1Q9UGQ2 172 aa14.78□□□□□ -0.04
RAB40C-207ENST00000563109 A0A0B4J293 547 aa14.77□□□□□ -0.05
RAB40C-207ENST00000563109 TEX50A0A1B0GTY4 177 aa14.77□□□□□ -0.05
RAB40C-207ENST00000563109 FBXO24O75426 580 aa14.77□□□□□ -0.05
RAB40C-207ENST00000563109 APELAP0DMC3 54 aa14.77□□□□□ -0.05
RAB40C-207ENST00000563109 CFHR3Q02985 330 aa14.77□□□□□ -0.05
RAB40C-207ENST00000563109 SMCO1Q147U7 214 aa14.77□□□□□ -0.05
RAB40C-207ENST00000563109 TEX38Q6PEX7 206 aa14.77□□□□□ -0.05
RAB40C-207ENST00000563109 C12orf45Q8N5I9 185 aaPredicted RBP14.77□□□□□ -0.05
RAB40C-207ENST00000563109 UXS1Q8NBZ7 420 aa14.77□□□□□ -0.05
RAB40C-207ENST00000563109 TNCP24821 2201 aa14.76□□□□□ -0.05
RAB40C-207ENST00000563109 A0A1B0GU03 582 aa14.76□□□□□ -0.05
RAB40C-207ENST00000563109 HMX3A6NHT5 357 aa14.76□□□□□ -0.05
RAB40C-207ENST00000563109 DBX1A6NMT0 343 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms