RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 BPGMP07738 259 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 SRP19P09132 144 aaKnown RBP0.7□□□□□ -2.3
CHD9-204ENST00000561869 LGALS1P09382 135 aaKnown RBP0.7□□□□□ -2.3
CHD9-204ENST00000561869 TFPTP0C1Z6 253 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 FGF6P10767 208 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 DEFA4P12838 97 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 IFI30P13284 250 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 HIST1H1TP22492 207 aaPredicted RBP0.7□□□□□ -2.3
CHD9-204ENST00000561869 PSMB8P28062 276 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 PEBP1P30086 187 aaKnown RBP0.7□□□□□ -2.3
CHD9-204ENST00000561869 CEBPGP53567 150 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 EMP1P54849 157 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 TPI1P60174 286 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 SPCS3P61009 180 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 AP1S1P61966 158 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 LSM6P62312 80 aaKnown RBP0.7□□□□□ -2.3
CHD9-204ENST00000561869 RELAQ04206 551 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 GUK1Q16774 197 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 ACOT6Q3I5F7 207 aaPredicted RBP0.7□□□□□ -2.3
CHD9-204ENST00000561869 GLT8D1Q68CQ7 371 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 C8orf74Q6P047 294 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 SLC35E3Q7Z769 313 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 OR51T1Q8NGJ9 327 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 OR1L8Q8NGR8 309 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 ZNF625Q96I27 306 aaPredicted RBP0.7□□□□□ -2.3
CHD9-204ENST00000561869 CNBD2Q96M20 576 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 PRAP1Q96NZ9 151 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 OR8D2Q9GZM6 311 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 VCX3BQ9H321 246 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 UBAP1Q9NZ09 502 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 NUP155O75694 1391 aa0.7□□□□□ -2.3
CHD9-204ENST00000561869 ZFHX2Q9C0A1 2572 aaPredicted RBP0.69□□□□□ -2.3
CHD9-204ENST00000561869 DENND4BO75064 1496 aaPredicted RBP0.69□□□□□ -2.3
CHD9-204ENST00000561869 SCAF11Q99590 1463 aaKnown RBP0.69□□□□□ -2.3
CHD9-204ENST00000561869 TGIF2-C20orf24A0A0A6YYL0 155 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 IGHV1-18A0A0C4DH31 117 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 A0A0J9YY10 115 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 A0A1B0GVG6 124 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 A0A1B0GX78 115 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 PQLC2LA1A4F0 135 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 CLDN24A6NM45 220 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 TRAPPC2LH3BP13 241 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 LEPROTO15243 131 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 NAPSAO96009 420 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 TCRBP04435 133 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 MSMBP08118 114 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 KCNE1P15382 129 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 CCR2P41597 374 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 CDKN2CP42773 168 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 RPL28P46779 137 aaKnown RBP0.69□□□□□ -2.3
CHD9-204ENST00000561869 OMPP47874 163 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 EVX1P49640 407 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 RAB13P51153 203 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 RAP1GDS1P52306 607 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 OR4D2P58180 307 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 RAB14P61106 215 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 PSME3P61289 254 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 RANP62826 216 aaKnown RBP0.69□□□□□ -2.3
CHD9-204ENST00000561869 RPL30P62888 115 aaKnown RBP0.69□□□□□ -2.3
CHD9-204ENST00000561869 CCL20P78556 96 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 CCL7P80098 99 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 GLO1Q04760 184 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 ITGB3BPQ13352 177 aaPredicted RBP0.69□□□□□ -2.3
CHD9-204ENST00000561869 HIST2H3PS2Q5TEC6 136 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 Q6ZS49 121 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 C20orf196Q8IYI0 205 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 RPP25LQ8N5L8 163 aaKnown RBP0.69□□□□□ -2.3
CHD9-204ENST00000561869 TBC1D19Q8N5T2 526 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 CLDN22Q8N7P3 220 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 C9orf163Q8N9P6 203 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 OR4X2Q8NGF9 303 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 ANKRD7Q92527 254 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 SLC7A6Q92536 515 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 KLK6Q92876 244 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 CCDC42Q96M95 316 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 ERMAPQ96PL5 475 aaPredicted RBP0.69□□□□□ -2.3
CHD9-204ENST00000561869 IMMP2LQ96T52 175 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 MRPL27Q9P0M9 148 aaKnown RBP0.69□□□□□ -2.3
CHD9-204ENST00000561869 VPS29Q9UBQ0 182 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 SLC22A13Q9Y226 551 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 FUT9Q9Y231 359 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 WRNQ14191 1432 aaPredicted RBP eCLIP0.69□□□□□ -2.39e-6■■■■■ 50.1
CHD9-204ENST00000561869 NCOA1Q15788 1441 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 MTUS2Q5JR59 1369 aa0.69□□□□□ -2.3
CHD9-204ENST00000561869 SMARCA4P51532 1647 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 PTPRSQ13332 1948 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 SDK1Q7Z5N4 2213 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 TRBV20OR9-2A0A075B6H5 130 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 IGKV1D-43A0A0B4J1Z2 117 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 TMEM269A0A1B0GVZ9 245 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 OR51F1A6NGY5 319 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 RFPL4AA6NLU0 287 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 RFPL4AL1F8VTS6 287 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 GOLGA6L19H0YKK7 550 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 H7C2G1 150 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 I3L521 148 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 PSMD12O00232 456 aaPredicted RBP0.68□□□□□ -2.3
CHD9-204ENST00000561869 KLRC4O43908 158 aa0.68□□□□□ -2.3
CHD9-204ENST00000561869 PGLYRP1O75594 196 aaPredicted RBP0.68□□□□□ -2.3
CHD9-204ENST00000561869 RPP14O95059 124 aaKnown RBP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms