RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 PPP5CP53041 499 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 CMC4P56277 68 aaPredicted RBP3.76□□□□□ -1.81
HERC1-213ENST00000561359 RBM11P57052 281 aaKnown RBP3.76□□□□□ -1.81
HERC1-213ENST00000561359 DLK1P80370 383 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 FLI1Q01543 452 aaPredicted RBP3.76□□□□□ -1.81
HERC1-213ENST00000561359 ZFP69Q49AA0 526 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 TMEM244Q5VVB8 128 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 LIPKQ5VXJ0 399 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 TRAT1Q6PIZ9 186 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 UNQ9165/PRO28630Q6UXU0 137 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 PRSS35Q8N3Z0 413 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 PACRGLQ8N7B6 248 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 PXT1Q8NFP0 134 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 OR13F1Q8NGS4 319 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 OR13C3Q8NGS6 347 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 OR52N1Q8NH53 320 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 TNFAIP8L1Q8WVP5 186 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 CMTM5Q96DZ9 223 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 YPEL2Q96QA6 119 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 TBX5Q99593 518 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 NIPSNAP1Q9BPW8 284 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 HOPXQ9BPY8 73 aaPredicted RBP3.76□□□□□ -1.81
HERC1-213ENST00000561359 TEX12Q9BXU0 123 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 IFI27L2Q9H2X8 130 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 ZNF556Q9HAH1 456 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 POMPQ9Y244 141 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 PRELID3BQ9Y3B1 194 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 UFC1Q9Y3C8 167 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 GMPPBQ9Y5P6 360 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 S4R3C0 116 aa3.76□□□□□ -1.81
HERC1-213ENST00000561359 NACAE9PAV3 2078 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 LRP2P98164 4655 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 METTL15A6NJ78 407 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 FAM90A7PA6NKC0 464 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 MCRIP1C9JLW8 97 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 UPK1BO75841 260 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 IFNA5P01569 189 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 APOA2P02652 100 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 CTSDP07339 412 aaPredicted RBP3.75□□□□□ -1.81
HERC1-213ENST00000561359 RAB3AP20336 220 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 GALP22466 123 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 SERPINB10P48595 397 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 CRISP1P54107 249 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 RAB14P61106 215 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 RPS27AP62979 156 aaKnown RBP3.75□□□□□ -1.81
HERC1-213ENST00000561359 HAMPP81172 84 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 IFITM3Q01628 133 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 GK3PQ14409 553 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 TNXAQ16473 311 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 PLAC9Q5JTB6 97 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 GPR107Q5VW38 600 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 GLT8D1Q68CQ7 371 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 DMKNQ6E0U4 476 aaPredicted RBP3.75□□□□□ -1.81
HERC1-213ENST00000561359 C8orf82Q6P1X6 216 aaPredicted RBP3.75□□□□□ -1.81
HERC1-213ENST00000561359 SSX6Q7RTT6 188 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 UFD1Q92890 307 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 PELI1Q96FA3 418 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 CPNE2Q96FN4 548 aaPredicted RBP3.75□□□□□ -1.81
HERC1-213ENST00000561359 ABHD14BQ96IU4 210 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 C1orf43Q9BWL3 253 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 CLN6Q9NWW5 311 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 EXTL2Q9UBQ6 330 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 STEAP1Q9UHE8 339 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 TBC1D24Q9ULP9 559 aa3.75□□□□□ -1.81
HERC1-213ENST00000561359 SAMHD1Q9Y3Z3 626 aaKnown RBP3.75□□□□□ -1.81
HERC1-213ENST00000561359 LRP1Q07954 4544 aaKnown RBP3.74□□□□□ -1.81
HERC1-213ENST00000561359 IGKV3-7A0A075B6H7 116 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 HMX3A6NHT5 357 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 SAC3D1A6NKF1 404 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 ZNF705EA8MWA4 302 aaPredicted RBP3.74□□□□□ -1.81
HERC1-213ENST00000561359 F8W036 122 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 M0QYG6 137 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 ZNF780AO75290 641 aaPredicted RBP3.74□□□□□ -1.81
HERC1-213ENST00000561359 ACTL6BO94805 426 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 CDRT1O95170 752 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 IGLV2-23P01705 113 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 CLEC3BP05452 202 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 RPA2P15927 270 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 ZNF182P17025 639 aaPredicted RBP3.74□□□□□ -1.81
HERC1-213ENST00000561359 SERPINA2P20848 420 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 FUT3P21217 361 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 ATP6V1B2P21281 511 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 MPV17LQ2QL34 196 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 SLC22A6Q4U2R8 563 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 NHLRC3Q5JS37 347 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 LY6G6FQ5SQ64 297 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 TMEM236Q5W0B7 351 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 MORN3Q6PF18 240 aaPredicted RBP3.74□□□□□ -1.81
HERC1-213ENST00000561359 PRSS48Q7RTY5 328 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 NOXA1Q86UR1 476 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 SLC25A42Q86VD7 318 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 PDPNQ86YL7 162 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 STHQ8IWL8 128 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 OR10G2Q8NGC3 310 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 OR51A4Q8NGJ6 313 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 OR5D14Q8NGL3 314 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 ZNRF2Q8NHG8 242 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 RHOXF1Q8NHV9 184 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 ZFAND1Q8TCF1 268 aa3.74□□□□□ -1.81
HERC1-213ENST00000561359 DEFB104AQ8WTQ1 72 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms