RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 CGB1A6NKQ9 187 aa20.35■□□□□ 0.85
SNRPA1-215ENST00000561187 RPA2P15927 270 aa20.35■□□□□ 0.85
SNRPA1-215ENST00000561187 HLA-GP17693 338 aa20.35■□□□□ 0.85
SNRPA1-215ENST00000561187 MAS1LP35410 378 aa20.35■□□□□ 0.85
SNRPA1-215ENST00000561187 TMEM61Q8N0U2 210 aa20.35■□□□□ 0.85
SNRPA1-215ENST00000561187 EEF1AKMT3Q96AZ1 226 aa20.35■□□□□ 0.85
SNRPA1-215ENST00000561187 SLC5A7Q9GZV3 580 aa20.35■□□□□ 0.85
SNRPA1-215ENST00000561187 PLECQ15149 4684 aaKnown RBP20.35■□□□□ 0.85
SNRPA1-215ENST00000561187 TRAV3A0A0B4J244 114 aa20.34■□□□□ 0.85
SNRPA1-215ENST00000561187 TMEM213A2RRL7 107 aa20.34■□□□□ 0.85
SNRPA1-215ENST00000561187 SCAF4O95104 1147 aaKnown RBP20.34■□□□□ 0.85
SNRPA1-215ENST00000561187 PPYP01298 95 aa20.34■□□□□ 0.85
SNRPA1-215ENST00000561187 CTRB1P17538 263 aa20.34■□□□□ 0.85
SNRPA1-215ENST00000561187 CTRB2Q6GPI1 263 aa20.34■□□□□ 0.85
SNRPA1-215ENST00000561187 TMEM17Q86X19 198 aa20.34■□□□□ 0.85
SNRPA1-215ENST00000561187 MLXQ9UH92 298 aa20.34■□□□□ 0.85
SNRPA1-215ENST00000561187 IGHV3-35A0A0C4DH35 117 aa20.33■□□□□ 0.85
SNRPA1-215ENST00000561187 LGALS9O00182 355 aa20.33■□□□□ 0.85
SNRPA1-215ENST00000561187 DHFRP00374 187 aa20.33■□□□□ 0.85
SNRPA1-215ENST00000561187 CRYGCP07315 174 aa20.33■□□□□ 0.85
SNRPA1-215ENST00000561187 CBLN1P23435 193 aa20.33■□□□□ 0.85
SNRPA1-215ENST00000561187 FAM209BQ5JX69 171 aa20.33■□□□□ 0.85
SNRPA1-215ENST00000561187 BTNL8Q6UX41 500 aa20.33■□□□□ 0.85
SNRPA1-215ENST00000561187 OR51H1Q8NH63 302 aa20.33■□□□□ 0.85
SNRPA1-215ENST00000561187 TECRQ9NZ01 308 aaKnown RBP20.33■□□□□ 0.85
SNRPA1-215ENST00000561187 GPR183P32249 361 aa20.32■□□□□ 0.84
SNRPA1-215ENST00000561187 ZNF57Q68EA5 555 aaPredicted RBP20.32■□□□□ 0.84
SNRPA1-215ENST00000561187 HOGA1Q86XE5 327 aa20.32■□□□□ 0.84
SNRPA1-215ENST00000561187 GPHB5Q86YW7 130 aa20.32■□□□□ 0.84
SNRPA1-215ENST00000561187 BET1LQ9NYM9 111 aa20.32■□□□□ 0.84
SNRPA1-215ENST00000561187 ALMS1Q8TCU4 4167 aa20.31■□□□□ 0.84
SNRPA1-215ENST00000561187 IGLV11-55A0A075B6I3 123 aa20.31■□□□□ 0.84
SNRPA1-215ENST00000561187 ATP6V1G2O95670 118 aa20.31■□□□□ 0.84
SNRPA1-215ENST00000561187 NEDD8Q15843 81 aa20.31■□□□□ 0.84
SNRPA1-215ENST00000561187 FAM106AQ4KMX7 169 aa20.31■□□□□ 0.84
SNRPA1-215ENST00000561187 TM4SF20Q53R12 229 aa20.31■□□□□ 0.84
SNRPA1-215ENST00000561187 ZNF773Q6PK81 442 aa20.31■□□□□ 0.84
SNRPA1-215ENST00000561187 UNQ9165/PRO28630Q6UXU0 137 aa20.31■□□□□ 0.84
SNRPA1-215ENST00000561187 UXS1Q8NBZ7 420 aa20.31■□□□□ 0.84
SNRPA1-215ENST00000561187 ETV7Q9Y603 341 aa20.31■□□□□ 0.84
SNRPA1-215ENST00000561187 OR2B8PP59922 312 aa20.3■□□□□ 0.84
SNRPA1-215ENST00000561187 AADACL3Q5VUY0 350 aa20.3■□□□□ 0.84
SNRPA1-215ENST00000561187 ZNF818PQ6ZRF7 136 aa20.3■□□□□ 0.84
SNRPA1-215ENST00000561187 SLC16A13Q7RTY0 426 aa20.3■□□□□ 0.84
SNRPA1-215ENST00000561187 OR52B4Q8NGK2 314 aa20.3■□□□□ 0.84
SNRPA1-215ENST00000561187 AUNIPQ9H7T9 357 aa20.3■□□□□ 0.84
SNRPA1-215ENST00000561187 S1PR2O95136 353 aa20.29■□□□□ 0.84
SNRPA1-215ENST00000561187 CLEC3BP05452 202 aa20.29■□□□□ 0.84
SNRPA1-215ENST00000561187 HIST1H1BP16401 226 aaKnown RBP20.29■□□□□ 0.84
SNRPA1-215ENST00000561187 CATR1Q13166 79 aa20.29■□□□□ 0.84
SNRPA1-215ENST00000561187 Q9H521 79 aa20.29■□□□□ 0.84
SNRPA1-215ENST00000561187 TMEM140Q9NV12 185 aa20.29■□□□□ 0.84
SNRPA1-215ENST00000561187 IGLC7A0M8Q6 106 aa20.28■□□□□ 0.84
SNRPA1-215ENST00000561187 A8MWP6 167 aa20.28■□□□□ 0.84
SNRPA1-215ENST00000561187 DMBX1Q8NFW5 382 aa20.28■□□□□ 0.84
SNRPA1-215ENST00000561187 OR10W1Q8NGF6 305 aa20.28■□□□□ 0.84
SNRPA1-215ENST00000561187 OR4A5Q8NH83 315 aa20.28■□□□□ 0.84
SNRPA1-215ENST00000561187 JTBO76095 146 aa20.27■□□□□ 0.84
SNRPA1-215ENST00000561187 TGFBR1P36897 503 aa20.27■□□□□ 0.84
SNRPA1-215ENST00000561187 COMMD5Q9GZQ3 224 aa20.27■□□□□ 0.84
SNRPA1-215ENST00000561187 UPK2O00526 184 aa20.26■□□□□ 0.83
SNRPA1-215ENST00000561187 NQO2P16083 231 aa20.26■□□□□ 0.83
SNRPA1-215ENST00000561187 TAS2R31P59538 309 aa20.26■□□□□ 0.83
SNRPA1-215ENST00000561187 HERV-K104P61576 105 aa20.26■□□□□ 0.83
SNRPA1-215ENST00000561187 MSMO1Q15800 293 aa20.26■□□□□ 0.83
SNRPA1-215ENST00000561187 ZNF585BQ52M93 769 aa20.26■□□□□ 0.83
SNRPA1-215ENST00000561187 ZBTB34Q8NCN2 500 aa20.26■□□□□ 0.83
SNRPA1-215ENST00000561187 CXorf58Q96LI9 332 aa20.26■□□□□ 0.83
SNRPA1-215ENST00000561187 IFT46Q9NQC8 304 aa20.26■□□□□ 0.83
SNRPA1-215ENST00000561187 DIABLOQ9NR28 239 aa20.26■□□□□ 0.83
SNRPA1-215ENST00000561187 EHFQ9NZC4 300 aa20.26■□□□□ 0.83
SNRPA1-215ENST00000561187 TRBV7-1A0A0A6YYK4 115 aa20.25■□□□□ 0.83
SNRPA1-215ENST00000561187 IGHV3-21A0A0B4J1V1 117 aa20.25■□□□□ 0.83
SNRPA1-215ENST00000561187 RBFOX2O43251 390 aaKnown RBP eCLIP20.25■□□□□ 0.83
SNRPA1-215ENST00000561187 HPRT1P00492 218 aa20.25■□□□□ 0.83
SNRPA1-215ENST00000561187 ZNF502Q8TBZ5 544 aa20.25■□□□□ 0.83
SNRPA1-215ENST00000561187 RLN1P04808 185 aa20.24■□□□□ 0.83
SNRPA1-215ENST00000561187 SCAND1P57086 179 aa20.24■□□□□ 0.83
SNRPA1-215ENST00000561187 PLET1Q6UQ28 207 aa20.24■□□□□ 0.83
SNRPA1-215ENST00000561187 OR5AP2Q8NGF4 316 aa20.24■□□□□ 0.83
SNRPA1-215ENST00000561187 AIFM2Q9BRQ8 373 aa20.24■□□□□ 0.83
SNRPA1-215ENST00000561187 HINT2Q9BX68 163 aa20.24■□□□□ 0.83
SNRPA1-215ENST00000561187 QTRT1Q9BXR0 403 aaKnown RBP20.24■□□□□ 0.83
SNRPA1-215ENST00000561187 IL17DQ8TAD2 202 aa20.23■□□□□ 0.83
SNRPA1-215ENST00000561187 GGTLC1Q9BX51 225 aa20.23■□□□□ 0.83
SNRPA1-215ENST00000561187 YTHDF1Q9BYJ9 559 aaKnown RBP20.23■□□□□ 0.83
SNRPA1-215ENST00000561187 A0A0A6YYH2 397 aa20.22■□□□□ 0.83
SNRPA1-215ENST00000561187 OR2T8A6NH00 312 aa20.22■□□□□ 0.83
SNRPA1-215ENST00000561187 A6NJ64 397 aa20.22■□□□□ 0.83
SNRPA1-215ENST00000561187 KLK9Q2XQG4 91 aa20.22■□□□□ 0.83
SNRPA1-215ENST00000561187 RBPMS2Q6ZRY4 209 aaKnown RBP20.22■□□□□ 0.83
SNRPA1-215ENST00000561187 UBQLN2Q9UHD9 624 aa20.22■□□□□ 0.83
SNRPA1-215ENST00000561187 KLK9Q9UKQ9 250 aa20.22■□□□□ 0.83
SNRPA1-215ENST00000561187 NSG2Q9Y328 171 aa20.22■□□□□ 0.83
SNRPA1-215ENST00000561187 IGHV3OR16-8A0A075B7F1 116 aa20.21■□□□□ 0.83
SNRPA1-215ENST00000561187 PMP2P02689 132 aa20.21■□□□□ 0.83
SNRPA1-215ENST00000561187 OR13C7P0DN81 318 aa20.21■□□□□ 0.83
SNRPA1-215ENST00000561187 CBX5P45973 191 aa20.21■□□□□ 0.83
SNRPA1-215ENST00000561187 RFX2P48378 723 aa20.21■□□□□ 0.83
SNRPA1-215ENST00000561187 ERVK-16P61578 105 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms