RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 RAB24Q969Q5 203 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 TCEAL7Q9BRU2 100 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 TMEM204Q9BSN7 226 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 C20orf24Q9BUV8 137 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 C19orf24Q9BVV8 132 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 SAV1Q9H4B6 383 aaPredicted RBP7.95□□□□□ -1.14
RTF1-206ENST00000560447 CHODLQ9H9P2 273 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 DYNLRB1Q9NP97 96 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 LSM4Q9Y4Z0 139 aaKnown RBP7.95□□□□□ -1.14
RTF1-206ENST00000560447 CADP27708 2225 aa7.95□□□□□ -1.14
RTF1-206ENST00000560447 DIDO1Q9BTC0 2240 aaKnown RBP7.94□□□□□ -1.14
RTF1-206ENST00000560447 A0A1W2PN81 502 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 A0A1W2PPV4 95 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 C5orf52A6NGY3 159 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 ZNF727A8MUV8 499 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 UBE2CO00762 179 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 MT-CO2P00403 227 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 S100A6P06703 90 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 CT45A6P0DMU7 189 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 CT45A5P0DMU8 189 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 CT45A7P0DMV0 189 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 USF1P22415 310 aaPredicted RBP7.94□□□□□ -1.14
RTF1-206ENST00000560447 CHRNB4P30926 498 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 CHRNA7P36544 502 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 RPL29P47914 159 aaKnown RBP7.94□□□□□ -1.14
RTF1-206ENST00000560447 CD81P60033 236 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 KLRB1Q12918 225 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 TMEM241Q24JQ0 296 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 BSXQ3C1V8 233 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 C2orf83Q53S99 150 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 ARSJQ5FYB0 599 aaPredicted RBP7.94□□□□□ -1.14
RTF1-206ENST00000560447 TEPPQ6URK8 271 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 SSX9Q7RTT3 188 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 PNKDQ8N490 385 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 FAM24BQ8N5W8 94 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 ST6GALNAC3Q8NDV1 305 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 OR5AN1Q8NGI8 311 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 NEUROG1Q92886 237 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 BTF3L4Q96K17 158 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 WFIKKN1Q96NZ8 548 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 GGTLC1Q9BX51 225 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 PLEKHA3Q9HB20 300 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 METTL1Q9UBP6 276 aaKnown RBP7.94□□□□□ -1.14
RTF1-206ENST00000560447 OR51B2Q9Y5P1 312 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 DOCK11Q5JSL3 2073 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 PLCE1Q9P212 2302 aa7.94□□□□□ -1.14
RTF1-206ENST00000560447 TRBV24-1A0A075B6N3 115 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 E7EQL1 145 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 J3QR06 171 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 CXorf1O96002 111 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 STAG3L2P0CL84 134 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 STAG3L3P0CL85 134 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 CD33P20138 364 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 MC5RP33032 325 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 AKR1C3P42330 323 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 FGF8P55075 233 aaPredicted RBP7.93□□□□□ -1.14
RTF1-206ENST00000560447 LINC00205P59089 165 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 HNF4GQ14541 408 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 ELOBQ15370 118 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 TMEM155Q4W5P6 130 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 TMEM200BQ69YZ2 307 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 ADAM5Q6NVV9 412 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 DUX4L9Q6RFH8 374 aaPredicted RBP7.93□□□□□ -1.14
RTF1-206ENST00000560447 TMEM144Q7Z5S9 345 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 MRPL41Q8IXM3 137 aaKnown RBP7.93□□□□□ -1.14
RTF1-206ENST00000560447 DMRTC2Q8IXT2 367 aaPredicted RBP7.93□□□□□ -1.14
RTF1-206ENST00000560447 OR9G1Q8NH87 305 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 TMEM167AQ8TBQ9 72 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 CACNG8Q8WXS5 425 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 ANAPC16Q96DE5 110 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 SLC35E1Q96K37 410 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 SMIM7Q9BQ49 75 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 SLC25A22Q9H936 323 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 GVINP1Q7Z2Y8 2422 aa7.93□□□□□ -1.14
RTF1-206ENST00000560447 MUC6Q6W4X9 2439 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 TRAV3A0A0B4J244 114 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 IGHV1-69-2A0A0G2JMI3 117 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 RRHO14718 337 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 IGHV2-5P01817 119 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 CD99P14209 185 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 GPX4P36969 197 aaPredicted RBP7.92□□□□□ -1.14
RTF1-206ENST00000560447 GNG10P50151 68 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 PPOXP50336 477 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 CEBPGP53567 150 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 DLX6P56179 175 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 RHOBP62745 196 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 OR4C13Q8NGP0 309 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 TMEM170AQ8WVE7 144 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 ISOC2Q96AB3 205 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 PLPPR2Q96GM1 343 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 RNF2Q99496 336 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 MGST2Q99735 147 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 MDFIQ99750 246 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 DOK5Q9P104 306 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 PXMP4Q9Y6I8 212 aa7.92□□□□□ -1.14
RTF1-206ENST00000560447 RIF1Q5UIP0 2472 aaKnown RBP7.92□□□□□ -1.14
RTF1-206ENST00000560447 CEP250Q9BV73 2442 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 PRRC2CQ9Y520 2896 aaKnown RBP7.91□□□□□ -1.14
RTF1-206ENST00000560447 TEX50A0A1B0GTY4 177 aa7.91□□□□□ -1.14
RTF1-206ENST00000560447 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms