RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 ZNF585BQ52M93 769 aa11.65□□□□□ -0.54
SNRPA1-210ENST00000560383 ACSM6Q6P461 480 aa11.65□□□□□ -0.54
SNRPA1-210ENST00000560383 ZNF429Q86V71 674 aa11.65□□□□□ -0.54
SNRPA1-210ENST00000560383 FAM223AQ8IWN6 122 aa11.65□□□□□ -0.54
SNRPA1-210ENST00000560383 ARRDC1Q8N5I2 433 aa11.65□□□□□ -0.54
SNRPA1-210ENST00000560383 AKIP1Q9NQ31 210 aa11.65□□□□□ -0.54
SNRPA1-210ENST00000560383 ZNF256Q9Y2P7 627 aaPredicted RBP11.65□□□□□ -0.54
SNRPA1-210ENST00000560383 HMX3A6NHT5 357 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 CGB1A6NKQ9 187 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 GABARAPH6UMI1 98 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 RGS5O15539 181 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 CD74P04233 296 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 ZP3P21754 424 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 MRPS10P82664 201 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 RHOGP84095 191 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 SSBP1Q04837 148 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 LHFPL1Q86WI0 220 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 SLC38A6Q8IZM9 456 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 NECAP1Q8NC96 275 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 FCAMRQ8WWV6 532 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 ISOC1Q96CN7 298 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 PRR25Q96S07 402 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 SLIRPQ9GZT3 109 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 HRASLSQ9HDD0 168 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 TMEM140Q9NV12 185 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 RABL2AQ9UBK7 228 aaPredicted RBP11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 PEF1Q9UBV8 284 aaKnown RBP11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 RABL2BQ9UNT1 228 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 STAB2Q8WWQ8 2551 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 DNAH7Q8WXX0 4024 aa11.64□□□□□ -0.55
SNRPA1-210ENST00000560383 TRAV3A0A0B4J244 114 aa11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 MARCH11A6NNE9 402 aa11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 M0QYG6 137 aa11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 PRH1P02810 166 aa11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 CD3DP04234 171 aa11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 CTRB1P17538 263 aa11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 OR2B8PP59922 312 aa11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 KLF5Q13887 457 aaPredicted RBP11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 RNASE10Q5GAN6 216 aaKnown RBP11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 CTRB2Q6GPI1 263 aa11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 TMEM229BQ8NBD8 167 aa11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 DMBX1Q8NFW5 382 aa11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 FYTTD1Q96QD9 318 aaKnown RBP11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 SRSF8Q9BRL6 282 aaKnown RBP11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 CEPT1Q9Y6K0 416 aa11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 U3KQK5 164 aa11.63□□□□□ -0.55
SNRPA1-210ENST00000560383 CTDSPLO15194 276 aa11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 NOL3O60936 208 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 IFNA6P05013 189 aa11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 MYOD1P15172 320 aa11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 AREGP15514 252 aa11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 PTBP1P26599 531 aaKnown RBP eCLIP11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 PSMB6P28072 239 aa11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 S100GP29377 79 aa11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 LPAR6P43657 344 aa11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 TAS2R19P59542 299 aa11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 DEFA5Q01523 94 aa11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 ATP5G2Q06055 141 aa11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 PHLDA2Q53GA4 152 aa11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 RNASE12Q5GAN4 147 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 SMIM4Q8WVI0 70 aa11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 ZNF486Q96H40 463 aaPredicted RBP11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 FANCD2OSQ96PS1 177 aa11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 NXF2Q9GZY0 626 aaKnown RBP11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 SORL1Q92673 2214 aa11.62□□□□□ -0.55
SNRPA1-210ENST00000560383 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.61□□□□□ -0.55
SNRPA1-210ENST00000560383 IGLC7A0M8Q6 106 aa11.61□□□□□ -0.55
SNRPA1-210ENST00000560383 ANKRD34BA5PLL1 514 aa11.61□□□□□ -0.55
SNRPA1-210ENST00000560383 DPPA5A6NC42 116 aa11.61□□□□□ -0.55
SNRPA1-210ENST00000560383 SAP30O75446 220 aa11.61□□□□□ -0.55
SNRPA1-210ENST00000560383 TRBV12-3P01733 135 aa11.61□□□□□ -0.55
SNRPA1-210ENST00000560383 ERVK-16P61578 105 aa11.61□□□□□ -0.55
SNRPA1-210ENST00000560383 RND3P61587 244 aa11.61□□□□□ -0.55
SNRPA1-210ENST00000560383 FAM209BQ5JX69 171 aa11.61□□□□□ -0.55
SNRPA1-210ENST00000560383 TBC1D26Q86UD7 250 aa11.61□□□□□ -0.55
SNRPA1-210ENST00000560383 DIRAS2Q96HU8 199 aa11.61□□□□□ -0.55
SNRPA1-210ENST00000560383 SOSTQ9BQB4 213 aa11.61□□□□□ -0.55
SNRPA1-210ENST00000560383 COMMD5Q9GZQ3 224 aa11.61□□□□□ -0.55
SNRPA1-210ENST00000560383 HUWE1Q7Z6Z7 4374 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 OR2J3O76001 311 aa11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 DHFRP00374 187 aa11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 KRASP01116 189 aa11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 EXOSC2Q13868 293 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 C15orf32Q32M92 178 aa11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 THOC7Q6I9Y2 204 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 STEAP1BQ6NZ63 245 aa11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 C19orf35Q6ZS72 473 aa11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 HSD17B13Q7Z5P4 300 aaPredicted RBP11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 OR4D10Q8NGI6 311 aa11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 TERB2Q8NHR7 220 aa11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 QTRT1Q9BXR0 403 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 DMRT1Q9Y5R6 373 aa11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 SMAD5-AS1Q9Y6J3 95 aa11.6□□□□□ -0.55
SNRPA1-210ENST00000560383 IGLV11-55A0A075B6I3 123 aa11.59□□□□□ -0.55
SNRPA1-210ENST00000560383 RAB3DO95716 219 aa11.59□□□□□ -0.55
SNRPA1-210ENST00000560383 IGKV1-39P01597 117 aa11.59□□□□□ -0.55
SNRPA1-210ENST00000560383 IGKV1D-39P04432 117 aa11.59□□□□□ -0.55
SNRPA1-210ENST00000560383 RPA2P15927 270 aa11.59□□□□□ -0.55
SNRPA1-210ENST00000560383 HIST1H1BP16401 226 aaKnown RBP11.59□□□□□ -0.55
SNRPA1-210ENST00000560383 G6PCP35575 357 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms