RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	GAFA1	Q96PS6	74 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	NEU1	Q99519	415 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	NDUFAF3	Q9BU61	184 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	CBLN4	Q9NTU7	201 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	CALY	Q9NYX4	217 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	OR6C3	Q9NZP0	311 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	SAA2-SAA4	A0A096LPE2	208 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	TRAV38-1	A0A0B4J264	116 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	MAP1LC3B2	A6NCE7	125 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	DVL1	O14640	695 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	MGST3	O14880	152 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	RAB29	O14966	203 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	PFN1	P07737	140 aa	Known RBP	4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	SAA2	P0DJI9	122 aa	Predicted RBP	4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	CD33	P20138	364 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	GALR1	P47211	349 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	TDGF1P3	P51864	188 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	TNFAIP6	P98066	277 aa	Predicted RBP	4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	PNRC1	Q12796	327 aa	Predicted RBP	4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	FOXC1	Q12948	553 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	PRAMEF5	Q5TYX0	476 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	TEX38	Q6PEX7	206 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	MOB3B	Q86TA1	216 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	OR10G4	Q8NGN3	311 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	FAM57A	Q8TBR7	257 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	MBD3L1	Q8WWY6	194 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	TMEM204	Q9BSN7	226 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	MAP1LC3B	Q9GZQ8	125 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	SRD5A3	Q9H8P0	318 aa		4.74	□□□□□ -1.65
LRRC49-223	ENST00000560369	TRAV1-1	A0A0B4J248	108 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	RNF212B	A8MTL3	300 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	CCL3L1	P16619	93 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	NPPC	P23582	126 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	TIMP3	P35625	211 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	NUTF2	P61970	127 aa	Known RBP	4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	RPL23	P62829	140 aa	Known RBP	4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	HBG1	P69891	147 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	HBG2	P69892	147 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	HTD2	P86397	168 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	CATR1	Q13166	79 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	DIAPH2-AS1	Q14236	149 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	MLANA	Q16655	118 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	BSX	Q3C1V8	233 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	TMEM41B	Q5BJD5	291 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	FFAR4	Q5NUL3	377 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	STUM	Q69YW2	141 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	LYPD2	Q6UXB3	125 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	MRPL41	Q8IXM3	137 aa	Known RBP	4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	DDB2	Q92466	427 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	LHX4	Q969G2	390 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	SNHG12	Q9BXW3	62 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	NPCDR1	Q9BY65	106 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	PATZ1	Q9HBE1	687 aa	Known RBP	4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	TMEM242	Q9NWH2	141 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	VAX2	Q9UIW0	290 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	UTP20	O75691	2785 aa	Known RBP	4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	HIVEP3	Q5T1R4	2406 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	SRRM4	A7MD48	611 aa	Known RBP	4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	PPP5D1	E7EU14	171 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369		H7BYZ3	331 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	F2RL2	O00254	374 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	IGKV1-16	P04430	117 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	FAM87A	P0C7U9	286 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	CHRNA7	P36544	502 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	FAM3B	P58499	235 aa	Predicted RBP	4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	RELB	Q01201	579 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	PAX5	Q02548	391 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	BSPH1	Q075Z2	132 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	ADIPOQ	Q15848	244 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	TMEM241	Q24JQ0	296 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	DNLZ	Q5SXM8	178 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	DPPA3	Q6W0C5	159 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	LYG1	Q8N1E2	194 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	ZBTB34	Q8NCN2	500 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	OR51G1	Q8NGK1	321 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	ZCCHC14	Q8WYQ9	949 aa	Known RBP	4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	RND1	Q92730	232 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	RAB24	Q969Q5	203 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	HSD17B10	Q99714	261 aa	Known RBP	4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	LRFN3	Q9BTN0	628 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	PARL	Q9H300	379 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	TMEM140	Q9NV12	185 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	NAT8	Q9UHE5	227 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	CRYBG3	Q68DQ2	2970 aa		4.73	□□□□□ -1.65
LRRC49-223	ENST00000560369	PGPEP1L	A6NFU8	196 aa		4.72	□□□□□ -1.65
LRRC49-223	ENST00000560369		A6NNC1	897 aa		4.72	□□□□□ -1.65
LRRC49-223	ENST00000560369	FAM90A26	D6RGX4	464 aa		4.72	□□□□□ -1.65
LRRC49-223	ENST00000560369	TMPRSS2	O15393	492 aa		4.72	□□□□□ -1.65
LRRC49-223	ENST00000560369	NUPR1	O60356	82 aa		4.72	□□□□□ -1.65
LRRC49-223	ENST00000560369	YPEL1	O60688	119 aa		4.72	□□□□□ -1.65
LRRC49-223	ENST00000560369	SCGB1D1	O95968	90 aa		4.72	□□□□□ -1.65
LRRC49-223	ENST00000560369	ADH4	P08319	380 aa		4.72	□□□□□ -1.65
LRRC49-223	ENST00000560369	BTF3	P20290	206 aa	Known RBP	4.72	□□□□□ -1.65
LRRC49-223	ENST00000560369	GRN	P28799	593 aa	Known RBP	4.72	□□□□□ -1.65
LRRC49-223	ENST00000560369	CFHR2	P36980	270 aa		4.72	□□□□□ -1.65
LRRC49-223	ENST00000560369	VDAC2	P45880	294 aa	Predicted RBP	4.72	□□□□□ -1.65
LRRC49-223	ENST00000560369	REG1B	P48304	166 aa		4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms