RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, humanhuman

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-208ENST00000560311 BRWD1-AS2P59051 145 aa5□□□□□ -1.61
IRF9-208ENST00000560311 CATR1Q13166 79 aa5□□□□□ -1.61
IRF9-208ENST00000560311 DCTN2Q13561 401 aaKnown RBP5□□□□□ -1.61
IRF9-208ENST00000560311 EXOSC2Q13868 293 aaKnown RBP5□□□□□ -1.61
IRF9-208ENST00000560311 CTF1Q16619 201 aa5□□□□□ -1.61
IRF9-208ENST00000560311 AADACL3Q5VUY0 350 aa5□□□□□ -1.61
IRF9-208ENST00000560311 C19orf35Q6ZS72 473 aa5□□□□□ -1.61
IRF9-208ENST00000560311 SSX9Q7RTT3 188 aa5□□□□□ -1.61
IRF9-208ENST00000560311 SNX29P2Q8IUI4 249 aa5□□□□□ -1.61
IRF9-208ENST00000560311 SPAG16Q8N0X2 631 aa5□□□□□ -1.61
IRF9-208ENST00000560311 PUSL1Q8N0Z8 303 aaKnown RBP5□□□□□ -1.61
IRF9-208ENST00000560311 ZBTB34Q8NCN2 500 aa5□□□□□ -1.61
IRF9-208ENST00000560311 ADAD2Q8NCV1 583 aaKnown RBP5□□□□□ -1.61
IRF9-208ENST00000560311 OR5H2Q8NGV7 314 aa5□□□□□ -1.61
IRF9-208ENST00000560311 OR51H1Q8NH63 302 aa5□□□□□ -1.61
IRF9-208ENST00000560311 CHAC2Q8WUX2 184 aa5□□□□□ -1.61
IRF9-208ENST00000560311 AP3S1Q92572 193 aa5□□□□□ -1.61
IRF9-208ENST00000560311 DLX4Q92988 240 aaPredicted RBP5□□□□□ -1.61
IRF9-208ENST00000560311 MOB3AQ96BX8 217 aa5□□□□□ -1.61
IRF9-208ENST00000560311 TMEM68Q96MH6 324 aa5□□□□□ -1.61
IRF9-208ENST00000560311 OR2A7Q96R45 310 aa5□□□□□ -1.61
IRF9-208ENST00000560311 SPIN2AQ99865 258 aa5□□□□□ -1.61
IRF9-208ENST00000560311 SPIN2BQ9BPZ2 258 aa5□□□□□ -1.61
IRF9-208ENST00000560311 ZNF2Q9BSG1 426 aaPredicted RBP5□□□□□ -1.61
IRF9-208ENST00000560311 SCOCQ9UIL1 159 aa5□□□□□ -1.61
IRF9-208ENST00000560311 PLXNB1O43157 2135 aa5□□□□□ -1.61
IRF9-208ENST00000560311 SACSQ9NZJ4 4579 aa5□□□□□ -1.61
IRF9-208ENST00000560311 A0A0G2JLM5 398 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 MSGN1A6NI15 193 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 FAM223BA6NKX1 122 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 FAM25AB3EWG3 89 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 FAM25CB3EWG5 89 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 FAM25GB3EWG6 89 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 RBFOX2O43251 390 aaKnown RBP eCLIP4.99□□□□□ -1.61
IRF9-208ENST00000560311 RBMXL2O75526 392 aaKnown RBP4.99□□□□□ -1.61
IRF9-208ENST00000560311 S1PR2O95136 353 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 LY86O95711 162 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 TRBV12-3P01733 135 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 PRH1P02810 166 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 ZNF735P0CB33 412 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 HLA-GP17693 338 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 ELK1P19419 428 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 HLA-DMAP28067 261 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 PRSS3P35030 304 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 RCVRNP35243 200 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 RPL27AP46776 148 aaKnown RBP4.99□□□□□ -1.61
IRF9-208ENST00000560311 RORCP51449 518 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 INSL3P51460 131 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 TAS2R31P59538 309 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 RHOGP84095 191 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 ZNF45Q02386 682 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 RNASE12Q5GAN4 147 aaKnown RBP4.99□□□□□ -1.61
IRF9-208ENST00000560311 GPR107Q5VW38 600 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 OR4A47Q6IF82 309 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 GPR141Q7Z602 305 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 HAPLN4Q86UW8 402 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 ZNF429Q86V71 674 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 FAM223AQ8IWN6 122 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 OR4A5Q8NH83 315 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 TMEM167AQ8TBQ9 72 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 GPX8Q8TED1 209 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 CCDC140Q96MF4 163 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 CMTM3Q96MX0 182 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 B9D2Q9BPU9 175 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 SCPEP1Q9HB40 452 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 TMEM140Q9NV12 185 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 COMMD9Q9P000 198 aa4.99□□□□□ -1.61
IRF9-208ENST00000560311 ZNF256Q9Y2P7 627 aaPredicted RBP4.99□□□□□ -1.61
IRF9-208ENST00000560311 SMIM31A0A1B0GVY4 71 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 A0A1B0GW64 132 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 DPPA5A6NC42 116 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 HMX3A6NHT5 357 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 NPIPB5A8MRT5 1133 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 B3GALNT1O75752 331 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 OR2J3O76001 311 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 HRASP01112 189 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 MYOD1P15172 320 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 AREGP15514 252 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 ZP3P21754 424 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 MAS1LP35410 378 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 RFX2P48378 723 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 ALDH3B2P48448 385 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 RPL8P62917 257 aaKnown RBP4.98□□□□□ -1.61
IRF9-208ENST00000560311 CTAG1AP78358 180 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 CD69Q07108 199 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 SPCS2Q15005 226 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 POU2AF1Q16633 256 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 TM4SF20Q53R12 229 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 DEFB121Q5J5C9 76 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 C11orf87Q6NUJ2 197 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 ZNF343Q6P1L6 599 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 ACSM6Q6P461 480 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 TTC9CQ8N5M4 171 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 OR6Q1Q8NGQ2 317 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 BORCS5Q969J3 196 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 USMG5Q96IX5 58 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 FYTTD1Q96QD9 318 aaKnown RBP4.98□□□□□ -1.61
IRF9-208ENST00000560311 RANGRFQ9HD47 186 aaPredicted RBP4.98□□□□□ -1.61
IRF9-208ENST00000560311 HRASLSQ9HDD0 168 aa4.98□□□□□ -1.61
IRF9-208ENST00000560311 AKIP1Q9NQ31 210 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms