RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 PPP1R27Q86WC6 154 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 GRPEL2Q8TAA5 225 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 FBXL15Q9H469 300 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 ZNF257Q9Y2Q1 563 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 OR51B2Q9Y5P1 312 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 MXRA5Q9NR99 2828 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 SONP18583 2426 aaKnown RBP9.73□□□□□ -0.85
HERC1-205ENST00000559886 E5RGE8 158 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 IFNA17P01571 189 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 HSPE1P61604 102 aaKnown RBP9.73□□□□□ -0.85
HERC1-205ENST00000559886 PJVKQ0ZLH3 352 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 PRSS8Q16651 343 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 DEFB112Q30KQ8 113 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 MMD2Q8IY49 270 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 OR8H1Q8NGG4 311 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 C22orf15Q8WYQ4 148 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 RAB40CQ96S21 281 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 RBKSQ9H477 322 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 YAE1D1Q9NRH1 226 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 KIAA1456Q9P272 454 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 TNFSF18Q9UNG2 199 aa9.73□□□□□ -0.85
HERC1-205ENST00000559886 PVALBP20472 110 aaPredicted RBP9.72□□□□□ -0.85
HERC1-205ENST00000559886 OR5B3Q8NH48 314 aa9.72□□□□□ -0.85
HERC1-205ENST00000559886 DCUN1D4Q92564 292 aa9.72□□□□□ -0.85
HERC1-205ENST00000559886 TCF19Q9Y242 345 aa9.72□□□□□ -0.85
HERC1-205ENST00000559886 TEX50A0A1B0GTY4 177 aa9.72□□□□□ -0.85
HERC1-205ENST00000559886 MDFIC2A0A1B0GVS7 189 aa9.72□□□□□ -0.85
HERC1-205ENST00000559886 ARPC5O15511 151 aa9.72□□□□□ -0.85
HERC1-205ENST00000559886 TMEM50AO95807 157 aa9.72□□□□□ -0.85
HERC1-205ENST00000559886 MYOD1P15172 320 aa9.72□□□□□ -0.85
HERC1-205ENST00000559886 PAX9P55771 341 aa9.72□□□□□ -0.85
HERC1-205ENST00000559886 C5orf64Q2M2E5 130 aa9.72□□□□□ -0.85
HERC1-205ENST00000559886 COMMD5Q9GZQ3 224 aa9.72□□□□□ -0.85
HERC1-205ENST00000559886 C1RLQ9NZP8 487 aa9.72□□□□□ -0.85
HERC1-205ENST00000559886 NCBP2LA6PVI3 153 aaKnown RBP9.71□□□□□ -0.85
HERC1-205ENST00000559886 MAS1LP35410 378 aa9.71□□□□□ -0.85
HERC1-205ENST00000559886 PLGLAQ15195 96 aa9.71□□□□□ -0.85
HERC1-205ENST00000559886 LAMTOR1Q6IAA8 161 aa9.71□□□□□ -0.85
HERC1-205ENST00000559886 C9orf62Q8N4C0 152 aa9.71□□□□□ -0.85
HERC1-205ENST00000559886 ZDHHC16Q969W1 377 aa9.71□□□□□ -0.85
HERC1-205ENST00000559886 SMIM8Q96KF7 97 aa9.71□□□□□ -0.85
HERC1-205ENST00000559886 TMUB1Q9BVT8 246 aa9.71□□□□□ -0.85
HERC1-205ENST00000559886 WSB1Q9Y6I7 421 aa9.71□□□□□ -0.85
HERC1-205ENST00000559886 ANK3Q12955 4377 aaKnown RBP9.71□□□□□ -0.86
HERC1-205ENST00000559886 CEBPZOSA8MTT3 80 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 H3BUX3 64 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 L7N2F9 121 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 FCN1O00602 326 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 KCNAB3O43448 404 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 P2RY1P47900 373 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 TAS2R30P59541 319 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 VAMP2P63027 116 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 PRCDQ00LT1 54 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 LGALSLQ3ZCW2 172 aaPredicted RBP9.71□□□□□ -0.86
HERC1-205ENST00000559886 SPINK9Q5DT21 86 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 IL17RELQ6ZVW7 336 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 Q8N9W7 124 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 INO80EQ8NBZ0 244 aaPredicted RBP9.71□□□□□ -0.86
HERC1-205ENST00000559886 OR1L8Q8NGR8 309 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 DTD1Q8TEA8 209 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 RBM14Q96PK6 669 aaKnown RBP9.71□□□□□ -0.86
HERC1-205ENST00000559886 PRDM13Q9H4Q3 707 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 TMEM160Q9NX00 188 aa9.71□□□□□ -0.86
HERC1-205ENST00000559886 SETXQ7Z333 2677 aaKnown RBP9.7□□□□□ -0.86
HERC1-205ENST00000559886 RNF222A6NCQ9 220 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 OR2F2O95006 317 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 IAPPP10997 89 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 CXCL2P19875 107 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 TUSC1Q2TAM9 212 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 ACOT7LQ6ZUV0 252 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 AQP10Q96PS8 301 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 CIB3Q96Q77 187 aaPredicted RBP9.7□□□□□ -0.86
HERC1-205ENST00000559886 CLCC1Q96S66 551 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 SMR3AQ99954 134 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 MFFQ9GZY8 342 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 NDUFA4L2Q9NRX3 87 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 LYRM2Q9NU23 88 aaPredicted RBP9.7□□□□□ -0.86
HERC1-205ENST00000559886 A6NDX4 124 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 E7EUB6 86 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 GPR137BO60478 399 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 ACTL6BO94805 426 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 LY86O95711 162 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 OPN1MWP04001 364 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 OPN1MW2P0DN77 364 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 OPN1MW3P0DN78 364 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 FOSL1P15407 271 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 VDAC2P45880 294 aaPredicted RBP9.7□□□□□ -0.86
HERC1-205ENST00000559886 COMPP49747 757 aaPredicted RBP9.7□□□□□ -0.86
HERC1-205ENST00000559886 RPL23AP62750 156 aaKnown RBP9.7□□□□□ -0.86
HERC1-205ENST00000559886 SSBP2P81877 361 aaPredicted RBP9.7□□□□□ -0.86
HERC1-205ENST00000559886 ZNF48Q96MX3 618 aaPredicted RBP9.7□□□□□ -0.86
HERC1-205ENST00000559886 SLC25A33Q9BSK2 321 aa9.7□□□□□ -0.86
HERC1-205ENST00000559886 MSGN1A6NI15 193 aa9.69□□□□□ -0.86
HERC1-205ENST00000559886 CGB1A6NKQ9 187 aa9.69□□□□□ -0.86
HERC1-205ENST00000559886 LY6G6DO95868 133 aa9.69□□□□□ -0.86
HERC1-205ENST00000559886 HKR1P10072 659 aa9.69□□□□□ -0.86
HERC1-205ENST00000559886 IER3P46695 156 aa9.69□□□□□ -0.86
HERC1-205ENST00000559886 ZNF345Q14585 488 aa9.69□□□□□ -0.86
HERC1-205ENST00000559886 TNXAQ16473 311 aa9.69□□□□□ -0.86
HERC1-205ENST00000559886 C10orf55Q5SWW7 151 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms