RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 PARP12Q9H0J9 701 aaKnown RBP4.45□□□□□ -1.7
USP3-215ENST00000559771 EDA2RQ9HAV5 297 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 OR2S2Q9NQN1 319 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 PARP11Q9NR21 331 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 GNG12Q9UBI6 72 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 ELF5Q9UKW6 265 aaPredicted RBP4.45□□□□□ -1.7
USP3-215ENST00000559771 TRAPPC2LQ9UL33 140 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 GAB2Q9UQC2 676 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 U3KQ87 197 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 SORL1Q92673 2214 aa4.45□□□□□ -1.7
USP3-215ENST00000559771 LCE6AA0A183 80 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 LINC00862A6NCI5 91 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 FAM90A7PA6NKC0 464 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 TMEM14DPA8MWL7 114 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 FAM90A23PA8MXZ1 464 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 RAB27BO00194 218 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 SPINT2O43291 252 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 YPEL1O60688 119 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 PDCD6O75340 191 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 SAP30O75446 220 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 SLC22A5O76082 557 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 LY86O95711 162 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 RAB3DO95716 219 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 GLAP06280 429 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 LGALS1P09382 135 aaKnown RBP4.44□□□□□ -1.7
USP3-215ENST00000559771 OR5H8P0DN80 308 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 NAT1P18440 290 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 CXCL3P19876 107 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 FUT3P21217 361 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 NFYAP23511 347 aaPredicted RBP4.44□□□□□ -1.7
USP3-215ENST00000559771 LINC00205P59089 165 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 TAS2R31P59538 309 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 RAB14P61106 215 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 CX3CL1P78423 397 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 HTD2P86397 168 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 RPL39P5Q59GN2 51 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 Q5BKY6 102 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 CLLU1Q5K131 121 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 C6orf183Q5T699 404 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 OR10K2Q6IF99 312 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 LIN54Q6MZP7 749 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 TMEM65Q6PI78 240 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 HAPLN4Q86UW8 402 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 SLC7A5P1Q8MH63 180 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 ZNF680Q8NEM1 530 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 OR56B1Q8NGI3 324 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 ARPC1AQ92747 370 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 SNAPC3Q92966 411 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 YPEL2Q96QA6 119 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 AGMATQ9BSE5 352 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 URM1Q9BTM9 101 aaKnown RBP4.44□□□□□ -1.7
USP3-215ENST00000559771 SELENOIQ9C0D9 397 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 CST11Q9H112 138 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 KCNK15Q9H427 330 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 FBXL15Q9H469 300 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 SPACA1Q9HBV2 294 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 MED9Q9NWA0 146 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 MGAT4CQ9UBM8 478 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 JPT1Q9UK76 154 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 ANAPC10Q9UM13 185 aa4.44□□□□□ -1.7
USP3-215ENST00000559771 PLECQ15149 4684 aaKnown RBP4.43□□□□□ -1.7
USP3-215ENST00000559771 A0A0A6YYD4 124 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 A0A0B4J2A0 478 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 A0A1W2PN81 502 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 A8MZ25 164 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 LINC01619G3V211 115 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 RRHO14718 337 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 CRTAPO75718 401 aaPredicted RBP4.43□□□□□ -1.7
USP3-215ENST00000559771 NAPSAO96009 420 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 IGLV1-51P01701 117 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 CD3DP04234 171 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 RLN1P04808 185 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 IGHV4-30-4P0DP06 118 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 CHRNA7P36544 502 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 HTR2BP41595 481 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 AP2S1P53680 142 aaPredicted RBP4.43□□□□□ -1.7
USP3-215ENST00000559771 CYCSP99999 105 aaKnown RBP4.43□□□□□ -1.7
USP3-215ENST00000559771 UNC119Q13432 240 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 ECSCRQ19T08 205 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 MRGPRG-AS1Q2M3A8 158 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 LGALSLQ3ZCW2 172 aaPredicted RBP4.43□□□□□ -1.7
USP3-215ENST00000559771 RNASE12Q5GAN4 147 aaKnown RBP4.43□□□□□ -1.7
USP3-215ENST00000559771 RNASE10Q5GAN6 216 aaKnown RBP4.43□□□□□ -1.7
USP3-215ENST00000559771 ZNF660Q6AZW8 331 aaPredicted RBP4.43□□□□□ -1.7
USP3-215ENST00000559771 AWAT2Q6E213 333 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 THOC7Q6I9Y2 204 aaKnown RBP4.43□□□□□ -1.7
USP3-215ENST00000559771 ZNF880Q6PDB4 577 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 TRAT1Q6PIZ9 186 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 IL34Q6ZMJ4 242 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 IDO2Q6ZQW0 420 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 SLC25A42Q86VD7 318 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 TMEM17Q86X19 198 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 FAM89BQ8N5H3 189 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 ARRDC1Q8N5I2 433 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 OR2AK2Q8NG84 335 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 OR5AN1Q8NGI8 311 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 OR51S1Q8NGJ8 323 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 OR10R2Q8NGX6 335 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 S100A13Q99584 98 aa4.43□□□□□ -1.7
USP3-215ENST00000559771 NICN1Q9BSH3 213 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms