RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 E7EQL1 145 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 PPIAL4DF5H284 164 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 PPIAL4FP0DN26 164 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 POU2AF1Q16633 256 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 TMEM30BQ3MIR4 351 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 FBXL19-AS1Q494R0 122 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 LYPD2Q6UXB3 125 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 RNASE6Q93091 150 aaKnown RBP9.04□□□□□ -0.96
SPG11-217ENST00000559511 C1orf159Q96HA4 380 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 MGST2Q99735 147 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 SDF2L1Q9HCN8 221 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 SIRT7Q9NRC8 400 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 PPIAL4AQ9Y536 164 aa9.04□□□□□ -0.96
SPG11-217ENST00000559511 NBASA2RRP1 2371 aa9.03□□□□□ -0.96
SPG11-217ENST00000559511 SRRM4A7MD48 611 aaKnown RBP9.03□□□□□ -0.96
SPG11-217ENST00000559511 B4DEV8 164 aa9.03□□□□□ -0.96
SPG11-217ENST00000559511 CYB5BO43169 146 aa9.03□□□□□ -0.96
SPG11-217ENST00000559511 YIF1AO95070 293 aa9.03□□□□□ -0.96
SPG11-217ENST00000559511 IFNA4P05014 189 aa9.03□□□□□ -0.96
SPG11-217ENST00000559511 GRNP28799 593 aaKnown RBP9.03□□□□□ -0.96
SPG11-217ENST00000559511 CHRNB4P30926 498 aa9.03□□□□□ -0.96
SPG11-217ENST00000559511 CDC34P49427 236 aaPredicted RBP9.03□□□□□ -0.96
SPG11-217ENST00000559511 PSMB3P49720 205 aa9.03□□□□□ -0.96
SPG11-217ENST00000559511 HSPE1P61604 102 aaKnown RBP9.03□□□□□ -0.96
SPG11-217ENST00000559511 ADORA2A-AS1P86434 159 aa9.03□□□□□ -0.96
SPG11-217ENST00000559511 PNRC1Q12796 327 aaPredicted RBP9.03□□□□□ -0.96
SPG11-217ENST00000559511 ACOT6Q3I5F7 207 aaPredicted RBP9.03□□□□□ -0.96
SPG11-217ENST00000559511 TMEM200BQ69YZ2 307 aa9.03□□□□□ -0.96
SPG11-217ENST00000559511 OR13D1Q8NGV5 346 aa9.03□□□□□ -0.96
SPG11-217ENST00000559511 GGACTQ9BVM4 153 aa9.03□□□□□ -0.96
SPG11-217ENST00000559511 GAL3ST2Q9H3Q3 398 aa9.03□□□□□ -0.96
SPG11-217ENST00000559511 TMEM106BQ9NUM4 274 aa9.03□□□□□ -0.96
SPG11-217ENST00000559511 TGIF2-C20orf24A0A0A6YYL0 155 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.02□□□□□ -0.96
SPG11-217ENST00000559511 CXorf65A6NEN9 183 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 SEC14L6B5MCN3 397 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 TNFRSF13BO14836 293 aaPredicted RBP9.02□□□□□ -0.96
SPG11-217ENST00000559511 HRASP01112 189 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 IL6RP08887 468 aaPredicted RBP9.02□□□□□ -0.96
SPG11-217ENST00000559511 MEF2CQ06413 473 aaPredicted RBP9.02□□□□□ -0.96
SPG11-217ENST00000559511 CDSNQ15517 529 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 ARSJQ5FYB0 599 aaPredicted RBP9.02□□□□□ -0.96
SPG11-217ENST00000559511 UNQ6494/PRO21346Q6UXR6 183 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 ZNF833PQ6ZTB9 187 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 C1orf87Q8N0U7 546 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 SLC24A4Q8NFF2 622 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 LINC01560Q8TB33 94 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 ZNF714Q96N38 554 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 SMIM7Q9BQ49 75 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 GGTLC1Q9BX51 225 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 PRORYQ9H606 182 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 PATZ1Q9HBE1 687 aaKnown RBP9.02□□□□□ -0.96
SPG11-217ENST00000559511 MANBALQ9NQG1 85 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 SLC35D1Q9NTN3 355 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 OR51B2Q9Y5P1 312 aa9.02□□□□□ -0.96
SPG11-217ENST00000559511 VSTM5A8MXK1 200 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 PAGE4O60829 102 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 MPDU1O75352 247 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 CA2P00918 260 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 OPN1MWP04001 364 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 OPN1MW2P0DN77 364 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 OPN1MW3P0DN78 364 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 NPY1RP25929 384 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 OPRK1P41145 380 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 RPS10P46783 165 aaKnown RBP9.02□□□□□ -0.97
SPG11-217ENST00000559511 LY6DQ14210 128 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 ZNF674Q2M3X9 581 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 C1QL4Q86Z23 238 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 OR4F5Q8NH21 305 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 RPUSD4Q96CM3 377 aaKnown RBP9.02□□□□□ -0.97
SPG11-217ENST00000559511 OR4F4Q96R69 305 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 SSX3Q99909 188 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 CTSZQ9UBR2 303 aa9.02□□□□□ -0.97
SPG11-217ENST00000559511 UBE2CO00762 179 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 KBTBD11O94819 623 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 PLAUP00749 431 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 IGHV2-5P01817 119 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 S100A6P06703 90 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 CD3EP07766 207 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 RTL8BQ17RB0 113 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 MIC13Q5XKP0 118 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 OR10A7Q8NGE5 316 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 H1FXQ92522 213 aaKnown RBP9.01□□□□□ -0.97
SPG11-217ENST00000559511 HINT2Q9BX68 163 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 MRPL20Q9BYC9 149 aaKnown RBP9.01□□□□□ -0.97
SPG11-217ENST00000559511 LSM4Q9Y4Z0 139 aaKnown RBP9.01□□□□□ -0.97
SPG11-217ENST00000559511 PXMP4Q9Y6I8 212 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 TMEM250H0YL14 139 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 UPK2O00526 184 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 CYP2G1PQ6ZSU1 146 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 SSMEM1Q8WWF3 244 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 PARLQ9H300 379 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 DYNLRB1Q9NP97 96 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 ENY2Q9NPA8 101 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 TMEM242Q9NWH2 141 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 NAT8Q9UHE5 227 aa9.01□□□□□ -0.97
SPG11-217ENST00000559511 ZNF98A6NK75 572 aa9□□□□□ -0.97
SPG11-217ENST00000559511 J3QR06 171 aa9□□□□□ -0.97
SPG11-217ENST00000559511 DVL1O14640 695 aa9□□□□□ -0.97
SPG11-217ENST00000559511 SIAH2O43255 324 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms