RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 CMTM1Q8IZ96 169 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 NECAP1Q8NC96 275 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 DMBX1Q8NFW5 382 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 OR6Q1Q8NGQ2 317 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 RAB2BQ8WUD1 216 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 SLC2A9Q9NRM0 540 aa8.38□□□□□ -1.07
SPG11-216ENST00000559347 DPPA5A6NC42 116 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 M0QYG6 137 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 BMPR1BO00238 502 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 UPK2O00526 184 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 RGS5O15539 181 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 OR2J3O76001 311 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 TPPPO94811 219 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 LY86O95711 162 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 IGLV1-51P01701 117 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 CRYGCP07315 174 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 SPNP16150 400 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 CTRB1P17538 263 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 PSMB6P28072 239 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 OR2B8PP59922 312 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 KLF5Q13887 457 aaPredicted RBP8.37□□□□□ -1.07
SPG11-216ENST00000559347 KLK9Q2XQG4 91 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 C15orf32Q32M92 178 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 PHLDA2Q53GA4 152 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 CTRB2Q6GPI1 263 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 C11orf87Q6NUJ2 197 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 HAPLN4Q86UW8 402 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 OR9G4Q8NGQ1 327 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 OR52I2Q8NH67 350 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 FCAMRQ8WWV6 532 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 DGCR14Q96DF8 476 aaKnown RBP8.37□□□□□ -1.07
SPG11-216ENST00000559347 FANCD2OSQ96PS1 177 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 OR4C12Q96R67 309 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 ABHD1Q96SE0 405 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 BCL7BQ9BQE9 202 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 RSRP1Q9BUV0 290 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 ELOVL1Q9BW60 279 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 CCDC59Q9P031 241 aaKnown RBP8.37□□□□□ -1.07
SPG11-216ENST00000559347 KLK11Q9UBX7 282 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 MTFP1Q9UDX5 166 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 KLK9Q9UKQ9 250 aa8.37□□□□□ -1.07
SPG11-216ENST00000559347 HUWE1Q7Z6Z7 4374 aaKnown RBP8.37□□□□□ -1.07
SPG11-216ENST00000559347 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.36□□□□□ -1.07
SPG11-216ENST00000559347 IGLC7A0M8Q6 106 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 CD3DP04234 171 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 REG1AP05451 166 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 GP9P14770 177 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 RPA2P15927 270 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 TBPP20226 339 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 LPAR6P43657 344 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 TMBIM6P55061 237 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 UCP3P55916 312 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 SYNJ2BPP57105 145 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 ERVK-16P61578 105 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 ATP5G2Q06055 141 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 RPEL1Q2QD12 228 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 ZNF585BQ52M93 769 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 RNASE10Q5GAN6 216 aaKnown RBP8.36□□□□□ -1.07
SPG11-216ENST00000559347 LPCAT3Q6P1A2 487 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 LHFPL1Q86WI0 220 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 SLC38A6Q8IZM9 456 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 ARRDC1Q8N5I2 433 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 DYNC2LI1Q8TCX1 351 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 C15orf40Q8WUR7 153 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 CCDC140Q96MF4 163 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 QTRT1Q9BXR0 403 aaKnown RBP8.36□□□□□ -1.07
SPG11-216ENST00000559347 COMMD5Q9GZQ3 224 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 FAM212BQ9NTI7 297 aaPredicted RBP8.36□□□□□ -1.07
SPG11-216ENST00000559347 DNAH7Q8WXX0 4024 aa8.36□□□□□ -1.07
SPG11-216ENST00000559347 IGLV11-55A0A075B6I3 123 aa8.35□□□□□ -1.07
SPG11-216ENST00000559347 CTDSP2O14595 271 aa8.35□□□□□ -1.07
SPG11-216ENST00000559347 DHFRP00374 187 aa8.35□□□□□ -1.07
SPG11-216ENST00000559347 KRASP01116 189 aa8.35□□□□□ -1.07
SPG11-216ENST00000559347 G6PCP35575 357 aa8.35□□□□□ -1.07
SPG11-216ENST00000559347 RPL5P46777 297 aaKnown RBP8.35□□□□□ -1.07
SPG11-216ENST00000559347 FAM209BQ5JX69 171 aa8.35□□□□□ -1.07
SPG11-216ENST00000559347 THOC7Q6I9Y2 204 aaKnown RBP8.35□□□□□ -1.07
SPG11-216ENST00000559347 IL34Q6ZMJ4 242 aa8.35□□□□□ -1.07
SPG11-216ENST00000559347 TBC1D26Q86UD7 250 aa8.35□□□□□ -1.07
SPG11-216ENST00000559347 CADM3Q8N126 398 aa8.35□□□□□ -1.07
SPG11-216ENST00000559347 OR4D10Q8NGI6 311 aa8.35□□□□□ -1.07
SPG11-216ENST00000559347 SRSF8Q9BRL6 282 aaKnown RBP8.35□□□□□ -1.07
SPG11-216ENST00000559347 FBXL7Q9UJT9 491 aa8.35□□□□□ -1.07
SPG11-216ENST00000559347 DMRT1Q9Y5R6 373 aa8.35□□□□□ -1.07
SPG11-216ENST00000559347 MFSD2BA6NFX1 497 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 PPP5D1E7EU14 171 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 H3BMQ9 156 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 GABARAPH6UMI1 98 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 NOL3O60936 208 aaKnown RBP8.34□□□□□ -1.07
SPG11-216ENST00000559347 NDUFB8O95169 186 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 IGKV1-39P01597 117 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 CD74P04233 296 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 IGKV1D-39P04432 117 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 HIST1H1BP16401 226 aaKnown RBP8.34□□□□□ -1.07
SPG11-216ENST00000559347 S100GP29377 79 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 PPP5CP53041 499 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 RND3P61587 244 aa8.34□□□□□ -1.07
SPG11-216ENST00000559347 MRPS10P82664 201 aaKnown RBP8.34□□□□□ -1.07
SPG11-216ENST00000559347 SSBP1Q04837 148 aaKnown RBP8.34□□□□□ -1.07
SPG11-216ENST00000559347 OR10W1Q8NGF6 305 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms