RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 C19orf35Q6ZS72 473 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 SSX9Q7RTT3 188 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 ADAD2Q8NCV1 583 aaKnown RBP5.58□□□□□ -1.52
SPG11-213ENST00000558988 MUC7Q8TAX7 377 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 DYNLRB2Q8TF09 96 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 ADTRPQ96IZ2 230 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 OR51E2Q9H255 320 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 RNF167Q9H6Y7 350 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 TUBA4BQ9H853 241 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 RAB26Q9ULW5 256 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 SSR3Q9UNL2 185 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 MRPS7Q9Y2R9 242 aaKnown RBP5.58□□□□□ -1.52
SPG11-213ENST00000558988 PRELID3BQ9Y3B1 194 aa5.58□□□□□ -1.52
SPG11-213ENST00000558988 CMYA5Q8N3K9 4069 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 TRAV18A0A075B6X5 111 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 MEIS3P1A6NDR6 274 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 PPP5D1E7EU14 171 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 C3orf84H3BNL1 204 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 ATP6V1G2O95670 118 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 IGLV1-51P01701 117 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 HLA-AP01891 365 aaKnown RBP5.57□□□□□ -1.52
SPG11-213ENST00000558988 REG1AP05451 166 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 LYL1P12980 280 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 AADACP22760 399 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 DTYMKP23919 212 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 SDC2P34741 201 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 FXYD4P59646 89 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 GABARAPL2P60520 117 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 RPL30P62888 115 aaKnown RBP5.57□□□□□ -1.52
SPG11-213ENST00000558988 ATP5G2Q06055 141 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 KLF5Q13887 457 aaPredicted RBP5.57□□□□□ -1.52
SPG11-213ENST00000558988 ARL6IP1Q15041 203 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 CDK10Q15131 360 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 GUCA2BQ16661 112 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 TATDN3Q17R31 274 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 MRGPRG-AS1Q2M3A8 158 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 HACD4Q5VWC8 232 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 SFXN4Q6P4A7 337 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 CFAP161Q6P656 301 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 GTSCR1Q86UQ5 136 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 SPARTQ8N0X7 666 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 ZNF645Q8N7E2 425 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 TEX45Q8NA69 505 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 OSR1Q8TAX0 266 aaPredicted RBP5.57□□□□□ -1.52
SPG11-213ENST00000558988 SECTM1Q8WVN6 248 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 Q9H521 79 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 PLEKHA3Q9HB20 300 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 RETNQ9HD89 108 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 RHBDL2Q9NX52 303 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 RBMX2Q9Y388 322 aaKnown RBP5.57□□□□□ -1.52
SPG11-213ENST00000558988 OR2W1Q9Y3N9 320 aa5.57□□□□□ -1.52
SPG11-213ENST00000558988 TNCP24821 2201 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 IZUMO1RA6ND01 250 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 PRSS47A8MTI9 375 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 H0Y980 276 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 BMPR1BO00238 502 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 SSX5O60225 188 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 CREBL2O60519 120 aaPredicted RBP5.56□□□□□ -1.52
SPG11-213ENST00000558988 CSN3P07498 182 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 MYOD1P15172 320 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 AREGP15514 252 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 RPA2P15927 270 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 EDN2P20800 178 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 RPL27AP46776 148 aaKnown RBP5.56□□□□□ -1.52
SPG11-213ENST00000558988 CD81P60033 236 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 ZNF45Q02386 682 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 KLF9Q13886 244 aaPredicted RBP5.56□□□□□ -1.52
SPG11-213ENST00000558988 C15orf32Q32M92 178 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 CASC10Q5T4H9 136 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 UBE2UQ5VVX9 321 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 LCN12Q6JVE5 192 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 MZT2BQ6NZ67 158 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 ZNF343Q6P1L6 599 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 CNIH2Q6PI25 160 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 TMEM17Q86X19 198 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 MMD2Q8IY49 270 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 GVQW1Q8N7I0 195 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 OR5H6Q8NGV6 325 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 OR4S2Q8NH73 311 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 FCGR1BQ92637 280 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 SNAPC3Q92966 411 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 USMG5Q96IX5 58 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 TMEM68Q96MH6 324 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 SPIN2AQ99865 258 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 SPIN2BQ9BPZ2 258 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 FAM110AQ9BQ89 295 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 HRASLSQ9HDD0 168 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 ZC4H2Q9NQZ6 224 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 CCL28Q9NRJ3 127 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 PEMTQ9UBM1 199 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 ANXA10Q9UJ72 324 aa5.56□□□□□ -1.52
SPG11-213ENST00000558988 ZNF320A2RRD8 509 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 FAM223BA6NKX1 122 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 KBTBD11O94819 623 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 OR2A4O95047 310 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 OR2C1O95371 312 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 DIRAS3O95661 229 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 HLA-DQB1P01920 261 aa5.55□□□□□ -1.52
SPG11-213ENST00000558988 CTXN2P0C2S0 81 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms