RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 P0C879 139 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 OR13C7P0DN81 318 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 NFYBP25208 207 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 RAB5BP61020 215 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 RPL30P62888 115 aaKnown RBP6.28□□□□□ -1.4
LRRC28-211ENST00000558890 RPP30P78346 268 aaKnown RBP6.28□□□□□ -1.4
LRRC28-211ENST00000558890 LTC4SQ16873 150 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 LRRC75BQ2VPJ9 315 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 SMUG1Q53HV7 270 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 TMEM41BQ5BJD5 291 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 ZNF506Q5JVG8 444 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 WDR25Q64LD2 544 aaPredicted RBP6.28□□□□□ -1.4
LRRC28-211ENST00000558890 SPSB3Q6PJ21 355 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 TMEM14EPQ6UXP3 125 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 TEX29Q8N6K0 151 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 LY6G5BQ8NDX9 201 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 CLDND2Q8NHS1 167 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 RFESDQ8TAC1 157 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 DTD1Q8TEA8 209 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 R3HDM4Q96D70 268 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 C5orf30Q96GV9 206 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 YPEL2Q96QA6 119 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 DCTN5Q9BTE1 182 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 WDR61Q9GZS3 305 aaKnown RBP6.28□□□□□ -1.4
LRRC28-211ENST00000558890 HIPK2Q9H2X6 1198 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 CALYQ9NYX4 217 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 CTSZQ9UBR2 303 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 SLC25A10Q9UBX3 287 aaPredicted RBP6.28□□□□□ -1.4
LRRC28-211ENST00000558890 CLN8Q9UBY8 286 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 DOCK11Q5JSL3 2073 aa6.28□□□□□ -1.4
LRRC28-211ENST00000558890 COL6A5A8TX70 2615 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 TRAV20A0A0B4J274 112 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 LOC102723971A0A1B0GUV8 181 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 hCG_1809904A0A1W2PP81 198 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 A0A1W2PPE2 198 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 A0A1W2PR64 198 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 A0A1W2PRV1 198 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 hADV38S2A0JD32 116 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 C7orf77A4D0Y5 90 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 FAM90A9PA6NNJ1 464 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 C1orf196B1AJZ1 125 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 C17orf112F2Z3M2 114 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 J3QL48 77 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 J3QLI3 93 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 M0R1W7 72 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 M0R1X1 148 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 F2RL2O00254 374 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 DVL1O14640 695 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 RBFOX2O43251 390 aaKnown RBP eCLIP6.27□□□□□ -1.41
LRRC28-211ENST00000558890 ENSAO43768 121 aaKnown RBP6.27□□□□□ -1.41
LRRC28-211ENST00000558890 RAMP3O60896 148 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 FCGR3BO75015 233 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 HPRT1P00492 218 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 MBP02144 154 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 GYPAP02724 150 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 IGHV4-31P0DP07 118 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 GNB2P62879 340 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 PAX2Q02962 417 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 HAGHQ16775 308 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 KHDC3LQ587J8 217 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 PRAMEF5Q5TYX0 476 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 OR8G2PQ6IF36 304 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 HAPLN4Q86UW8 402 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 ZNF709Q8N972 641 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.27□□□□□ -1.41
LRRC28-211ENST00000558890 OR10P1Q8NGE3 313 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 OR4S2Q8NH73 311 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 RXFP4Q8TDU9 374 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 TAF15Q92804 592 aaKnown RBP eCLIP6.27□□□□□ -1.41
LRRC28-211ENST00000558890 OR4C12Q96R67 309 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 S1PR3Q99500 378 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 RSG1Q9BU20 258 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 ABHD14AQ9BUJ0 271 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 SCRT1Q9BWW7 348 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 GAL3ST2Q9H3Q3 398 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 TUBA4BQ9H853 241 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 BIN3Q9NQY0 253 aa6.27□□□□□ -1.41
LRRC28-211ENST00000558890 MAP1LC3B2A6NCE7 125 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 ZNF729A6NN14 1252 aaPredicted RBP6.26□□□□□ -1.41
LRRC28-211ENST00000558890 MARCH11A6NNE9 402 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 SMAD7O15105 426 aaKnown RBP6.26□□□□□ -1.41
LRRC28-211ENST00000558890 SOX15O60248 233 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 MT-ND4LP03901 98 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 MSMBP08118 114 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 SRP19P09132 144 aaKnown RBP6.26□□□□□ -1.41
LRRC28-211ENST00000558890 BCL2P10415 239 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 FOLR2P14207 255 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 FGF7P21781 194 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 DUTP33316 252 aaKnown RBP6.26□□□□□ -1.41
LRRC28-211ENST00000558890 TAGLN2P37802 199 aaKnown RBP6.26□□□□□ -1.41
LRRC28-211ENST00000558890 THBS3P49746 956 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 CEBPGP53567 150 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 ELLP55199 621 aaPredicted RBP6.26□□□□□ -1.41
LRRC28-211ENST00000558890 BPIFB3P59826 476 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 RPL31P62899 125 aaKnown RBP6.26□□□□□ -1.41
LRRC28-211ENST00000558890 HOXA4Q00056 320 aaPredicted RBP6.26□□□□□ -1.41
LRRC28-211ENST00000558890 ARL16Q0P5N6 197 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 ICAM4Q14773 271 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 TMEM249Q2WGJ8 235 aa6.26□□□□□ -1.41
LRRC28-211ENST00000558890 MORN2Q502X0 79 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms