RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 TRBV9A0A0B4J1U6 114 aa11.72□□□□□ -0.53
RPL28-207ENST00000558815 IGHV3-23P01764 117 aa11.72□□□□□ -0.53
RPL28-207ENST00000558815 IFNA6P05013 189 aa11.72□□□□□ -0.53
RPL28-207ENST00000558815 DEFA4P12838 97 aa11.72□□□□□ -0.53
RPL28-207ENST00000558815 F2RP25116 425 aa11.72□□□□□ -0.53
RPL28-207ENST00000558815 C15orf32Q32M92 178 aa11.72□□□□□ -0.53
RPL28-207ENST00000558815 LAX1Q8IWV1 398 aa11.72□□□□□ -0.53
RPL28-207ENST00000558815 NECAP1Q8NC96 275 aa11.72□□□□□ -0.53
RPL28-207ENST00000558815 FCAMRQ8WWV6 532 aa11.72□□□□□ -0.53
RPL28-207ENST00000558815 DGCR14Q96DF8 476 aaKnown RBP11.72□□□□□ -0.53
RPL28-207ENST00000558815 COMMD5Q9GZQ3 224 aa11.72□□□□□ -0.53
RPL28-207ENST00000558815 MIXL1Q9H2W2 232 aa11.72□□□□□ -0.53
RPL28-207ENST00000558815 SLC2A9Q9NRM0 540 aa11.72□□□□□ -0.53
RPL28-207ENST00000558815 LSM4Q9Y4Z0 139 aaKnown RBP11.72□□□□□ -0.53
RPL28-207ENST00000558815 DNAH9Q9NYC9 4486 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 CGB1A6NKQ9 187 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 MARCH11A6NNE9 402 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 NPIPB5A8MRT5 1133 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 CTDSP2O14595 271 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 NOL3O60936 208 aaKnown RBP11.71□□□□□ -0.53
RPL28-207ENST00000558815 NDUFB8O95169 186 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 KRASP01116 189 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 GP9P14770 177 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 PGAM2P15259 253 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 PSMB6P28072 239 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 S100GP29377 79 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 G6PCP35575 357 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 KLF5Q13887 457 aaPredicted RBP11.71□□□□□ -0.53
RPL28-207ENST00000558815 POU2AF1Q16633 256 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 TATDN3Q17R31 274 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 RNASE10Q5GAN6 216 aaKnown RBP11.71□□□□□ -0.53
RPL28-207ENST00000558815 LPCAT3Q6P1A2 487 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 TBC1D26Q86UD7 250 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 OR9G4Q8NGQ1 327 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 RAB2BQ8WUD1 216 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 HINT2Q9BX68 163 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 NSG2Q9Y328 171 aa11.71□□□□□ -0.53
RPL28-207ENST00000558815 PPP5D1E7EU14 171 aa11.7□□□□□ -0.54
RPL28-207ENST00000558815 BMPR1BO00238 502 aa11.7□□□□□ -0.54
RPL28-207ENST00000558815 DHFRP00374 187 aa11.7□□□□□ -0.54
RPL28-207ENST00000558815 PPP5CP53041 499 aa11.7□□□□□ -0.54
RPL28-207ENST00000558815 OR2B8PP59922 312 aa11.7□□□□□ -0.54
RPL28-207ENST00000558815 VAX1Q5SQQ9 334 aa11.7□□□□□ -0.54
RPL28-207ENST00000558815 ABHD1Q96SE0 405 aa11.7□□□□□ -0.54
RPL28-207ENST00000558815 ASCL2Q99929 193 aa11.7□□□□□ -0.54
RPL28-207ENST00000558815 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.69□□□□□ -0.54
RPL28-207ENST00000558815 SNAPC5O75971 98 aa11.69□□□□□ -0.54
RPL28-207ENST00000558815 HLA-AP01891 365 aaKnown RBP11.69□□□□□ -0.54
RPL28-207ENST00000558815 CD3DP04234 171 aa11.69□□□□□ -0.54
RPL28-207ENST00000558815 CRYGCP07315 174 aa11.69□□□□□ -0.54
RPL28-207ENST00000558815 CTRB1P17538 263 aa11.69□□□□□ -0.54
RPL28-207ENST00000558815 ZNF585BQ52M93 769 aa11.69□□□□□ -0.54
RPL28-207ENST00000558815 CTRB2Q6GPI1 263 aa11.69□□□□□ -0.54
RPL28-207ENST00000558815 SLC38A6Q8IZM9 456 aa11.69□□□□□ -0.54
RPL28-207ENST00000558815 OR10W1Q8NGF6 305 aa11.69□□□□□ -0.54
RPL28-207ENST00000558815 FANCD2OSQ96PS1 177 aa11.69□□□□□ -0.54
RPL28-207ENST00000558815 QTRT1Q9BXR0 403 aaKnown RBP11.69□□□□□ -0.54
RPL28-207ENST00000558815 MTFP1Q9UDX5 166 aa11.69□□□□□ -0.54
RPL28-207ENST00000558815 SMAD5-AS1Q9Y6J3 95 aa11.69□□□□□ -0.54
RPL28-207ENST00000558815 IGLC7A0M8Q6 106 aa11.68□□□□□ -0.54
RPL28-207ENST00000558815 IGLV1-51P01701 117 aa11.68□□□□□ -0.54
RPL28-207ENST00000558815 TRAPPC2P0DI81 140 aa11.68□□□□□ -0.54
RPL28-207ENST00000558815 TRAPPC2BP0DI82 140 aa11.68□□□□□ -0.54
RPL28-207ENST00000558815 PI3P19957 117 aa11.68□□□□□ -0.54
RPL28-207ENST00000558815 TMBIM6P55061 237 aa11.68□□□□□ -0.54
RPL28-207ENST00000558815 SCGB2B2Q4G0G5 96 aa11.68□□□□□ -0.54
RPL28-207ENST00000558815 CLEC19AQ6UXS0 136 aa11.68□□□□□ -0.54
RPL28-207ENST00000558815 DYNC2LI1Q8TCX1 351 aa11.68□□□□□ -0.54
RPL28-207ENST00000558815 C15orf40Q8WUR7 153 aa11.68□□□□□ -0.54
RPL28-207ENST00000558815 C6orf62Q9GZU0 229 aaPredicted RBP11.68□□□□□ -0.54
RPL28-207ENST00000558815 OR51B2Q9Y5P1 312 aa11.68□□□□□ -0.54
RPL28-207ENST00000558815 TEX50A0A1B0GTY4 177 aa11.67□□□□□ -0.54
RPL28-207ENST00000558815 HIST1H1BP16401 226 aaKnown RBP11.67□□□□□ -0.54
RPL28-207ENST00000558815 RPL5P46777 297 aaKnown RBP11.67□□□□□ -0.54
RPL28-207ENST00000558815 UCP3P55916 312 aa11.67□□□□□ -0.54
RPL28-207ENST00000558815 TAS2R19P59542 299 aa11.67□□□□□ -0.54
RPL28-207ENST00000558815 IL18Q14116 193 aa11.67□□□□□ -0.54
RPL28-207ENST00000558815 OR4D10Q8NGI6 311 aa11.67□□□□□ -0.54
RPL28-207ENST00000558815 OR1L8Q8NGR8 309 aa11.67□□□□□ -0.54
RPL28-207ENST00000558815 EEF1AKMT3Q96AZ1 226 aa11.67□□□□□ -0.54
RPL28-207ENST00000558815 DIRAS2Q96HU8 199 aa11.67□□□□□ -0.54
RPL28-207ENST00000558815 ZC4H2Q9NQZ6 224 aa11.67□□□□□ -0.54
RPL28-207ENST00000558815 CCDC59Q9P031 241 aaKnown RBP11.67□□□□□ -0.54
RPL28-207ENST00000558815 PEMTQ9UBM1 199 aa11.67□□□□□ -0.54
RPL28-207ENST00000558815 SORL1Q92673 2214 aa11.66□□□□□ -0.54
RPL28-207ENST00000558815 IGLV11-55A0A075B6I3 123 aa11.66□□□□□ -0.54
RPL28-207ENST00000558815 MFSD2BA6NFX1 497 aa11.66□□□□□ -0.54
RPL28-207ENST00000558815 GABARAPH6UMI1 98 aa11.66□□□□□ -0.54
RPL28-207ENST00000558815 OR2C1O95371 312 aa11.66□□□□□ -0.54
RPL28-207ENST00000558815 RAB3DO95716 219 aa11.66□□□□□ -0.54
RPL28-207ENST00000558815 CSN3P07498 182 aa11.66□□□□□ -0.54
RPL28-207ENST00000558815 OR13C7P0DN81 318 aa11.66□□□□□ -0.54
RPL28-207ENST00000558815 ARL3P36405 182 aa11.66□□□□□ -0.54
RPL28-207ENST00000558815 MECP2P51608 486 aaKnown RBP11.66□□□□□ -0.54
RPL28-207ENST00000558815 FAAP20Q6NZ36 180 aa11.66□□□□□ -0.54
RPL28-207ENST00000558815 IL34Q6ZMJ4 242 aa11.66□□□□□ -0.54
RPL28-207ENST00000558815 ARRDC1Q8N5I2 433 aa11.66□□□□□ -0.54
RPL28-207ENST00000558815 TMEM229BQ8NBD8 167 aa11.66□□□□□ -0.54
RPL28-207ENST00000558815 MRGPRFQ96AM1 343 aa11.66□□□□□ -0.54
RPL28-207ENST00000558815 CCDC140Q96MF4 163 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms