RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 TRIM77I1YAP6 450 aa10.46□□□□□ -0.74
SMAD3-207ENST00000558763 APOA2P02652 100 aa10.46□□□□□ -0.74
SMAD3-207ENST00000558763 OR8U8P0C7N1 319 aa10.46□□□□□ -0.74
SMAD3-207ENST00000558763 DSCR9P59020 149 aa10.46□□□□□ -0.74
SMAD3-207ENST00000558763 RPS16P62249 146 aaKnown RBP10.46□□□□□ -0.74
SMAD3-207ENST00000558763 GNB2P62879 340 aa10.46□□□□□ -0.74
SMAD3-207ENST00000558763 THNSL2Q86YJ6 484 aa10.46□□□□□ -0.74
SMAD3-207ENST00000558763 PDPNQ86YL7 162 aa10.46□□□□□ -0.74
SMAD3-207ENST00000558763 TGIF2LXQ8IUE1 241 aa10.46□□□□□ -0.74
SMAD3-207ENST00000558763 CLDND2Q8NHS1 167 aa10.46□□□□□ -0.74
SMAD3-207ENST00000558763 IGHV4-61A0A0C4DH41 118 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 LY6LH3BQJ8 138 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 BUB1B-PAK6H3BSN5 160 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 HSPE1P61604 102 aaKnown RBP10.45□□□□□ -0.74
SMAD3-207ENST00000558763 HCP5Q6MZN7 132 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 LILRB2Q8N423 598 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 RITA1Q96K30 269 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 HARBI1Q96MB7 349 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 NUP50Q9UKX7 468 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 UBE2L5PA0A1B0GUS4 154 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 A0A1W2PPH5 198 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 UMAD1C9J7I0 102 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 FAM157AC9JC47 383 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 RRHO14718 337 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 LY86O95711 162 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 IFNA5P01569 189 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 IGHV2-5P01817 119 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 ADCYAP1P18509 176 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 ZFP36P26651 326 aaKnown RBP10.45□□□□□ -0.74
SMAD3-207ENST00000558763 CAMLGP49069 296 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 PAX2Q02962 417 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 AKR1C1Q04828 323 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 MRGPRG-AS1Q2M3A8 158 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 SPSB3Q6PJ21 355 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 KRTAP1-3Q8IUG1 177 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 CCDC28AQ8IWP9 274 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 OR4C13Q8NGP0 309 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 PSMG3Q9BT73 122 aaPredicted RBP10.45□□□□□ -0.74
SMAD3-207ENST00000558763 HIPK2Q9H2X6 1198 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 ONECUT1Q9UBC0 465 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 ZNF257Q9Y2Q1 563 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 WASHC3Q9Y3C0 194 aa10.45□□□□□ -0.74
SMAD3-207ENST00000558763 LOC105371242A0A075B767 164 aa10.44□□□□□ -0.74
SMAD3-207ENST00000558763 H7C2Y5 167 aa10.44□□□□□ -0.74
SMAD3-207ENST00000558763 KBTBD11O94819 623 aa10.44□□□□□ -0.74
SMAD3-207ENST00000558763 COX7A1P24310 79 aa10.44□□□□□ -0.74
SMAD3-207ENST00000558763 ZNF616Q08AN1 781 aa10.44□□□□□ -0.74
SMAD3-207ENST00000558763 CENPVQ7Z7K6 275 aaPredicted RBP10.44□□□□□ -0.74
SMAD3-207ENST00000558763 FAM213BQ8TBF2 198 aa10.44□□□□□ -0.74
SMAD3-207ENST00000558763 TAF15Q92804 592 aaKnown RBP eCLIP10.44□□□□□ -0.74
SMAD3-207ENST00000558763 LHX4Q969G2 390 aa10.44□□□□□ -0.74
SMAD3-207ENST00000558763 FLYWCH2Q96CP2 140 aaKnown RBP10.44□□□□□ -0.74
SMAD3-207ENST00000558763 Q96MF0 132 aa10.44□□□□□ -0.74
SMAD3-207ENST00000558763 TMEM147Q9BVK8 224 aa10.44□□□□□ -0.74
SMAD3-207ENST00000558763 PRNDQ9UKY0 176 aa10.44□□□□□ -0.74
SMAD3-207ENST00000558763 FAM96BQ9Y3D0 163 aa10.44□□□□□ -0.74
SMAD3-207ENST00000558763 FBXO7Q9Y3I1 522 aa10.44□□□□□ -0.74
SMAD3-207ENST00000558763 OR51B2Q9Y5P1 312 aa10.44□□□□□ -0.74
SMAD3-207ENST00000558763 ITPR3Q14573 2671 aa10.44□□□□□ -0.74
SMAD3-207ENST00000558763 C9JQL5 133 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 M0R1W7 72 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 PRH1P02810 166 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 CD5P06127 495 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 SLC25A16P16260 332 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 IL3RAP26951 378 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 LMO4P61968 165 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 ARF6P62330 175 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 PRCDQ00LT1 54 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 ATP6V1FQ16864 119 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 PNKDQ8N490 385 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 OR11H6Q8NGC7 330 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 OR10P1Q8NGE3 313 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 PINX1Q96BK5 328 aaKnown RBP10.43□□□□□ -0.74
SMAD3-207ENST00000558763 TMEM231Q9H6L2 316 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 VSIRQ9H7M9 311 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 HEYLQ9NQ87 328 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-207ENST00000558763 IGHV1-3A0A0C4DH29 117 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 TEX50A0A1B0GTY4 177 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 CGB1A6NKQ9 187 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 ODF3BA8MYP8 253 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 AGPAT2O15120 278 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 SNCAP37840 140 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 PRRX1P54821 245 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 TMEM167AQ8TBQ9 72 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 MS4A7Q9GZW8 240 aaPredicted RBP10.43□□□□□ -0.74
SMAD3-207ENST00000558763 SIRT7Q9NRC8 400 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 UQCC1Q9NVA1 299 aa10.43□□□□□ -0.74
SMAD3-207ENST00000558763 ZNF469Q96JG9 3925 aaPredicted RBP10.42□□□□□ -0.74
SMAD3-207ENST00000558763 IGHV3-72A0A0B4J1Y9 119 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 A0A1B0GW64 132 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 A0A1W2PPI3 338 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 TMEM218A2RU14 115 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 RNF223E7ERA6 249 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 E7EUB6 86 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 SCO1O75880 301 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 HOXA1P49639 335 aaPredicted RBP10.42□□□□□ -0.74
SMAD3-207ENST00000558763 RAB13P51153 203 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 ZNF726P1Q15940 193 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 BSXQ3C1V8 233 aa10.42□□□□□ -0.74
SMAD3-207ENST00000558763 C10orf91Q5T1B1 145 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms