RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 HLA-GP17693 338 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 VAMP1P23763 118 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 PPP1R1AQ13522 171 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 UNQ5815/PRO19632Q6UWF5 114 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 SHISA2Q6UWI4 295 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 H2BFWTQ7Z2G1 175 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 DUSP18Q8NEJ0 188 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 OR4X2Q8NGF9 303 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 NSG2Q9Y328 171 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 NUBP2Q9Y5Y2 271 aa13.69□□□□□ -0.22
TPM1-214ENST00000558544 A0A1W2PN81 502 aa13.68□□□□□ -0.22
TPM1-214ENST00000558544 TCRBP04435 133 aa13.68□□□□□ -0.22
TPM1-214ENST00000558544 ANXA3P12429 323 aa13.68□□□□□ -0.22
TPM1-214ENST00000558544 ANXA7P20073 488 aaKnown RBP13.68□□□□□ -0.22
TPM1-214ENST00000558544 PPIFP30405 207 aaKnown RBP13.68□□□□□ -0.22
TPM1-214ENST00000558544 MAS1LP35410 378 aa13.68□□□□□ -0.22
TPM1-214ENST00000558544 CHRNA7P36544 502 aa13.68□□□□□ -0.22
TPM1-214ENST00000558544 RPL27AP46776 148 aaKnown RBP13.68□□□□□ -0.22
TPM1-214ENST00000558544 OR2B8PP59922 312 aa13.68□□□□□ -0.22
TPM1-214ENST00000558544 TMEM267Q0VDI3 215 aaPredicted RBP13.68□□□□□ -0.22
TPM1-214ENST00000558544 C19orf54Q5BKX5 351 aa13.68□□□□□ -0.22
TPM1-214ENST00000558544 TMEM268Q5VZI3 342 aa13.68□□□□□ -0.22
TPM1-214ENST00000558544 ZNF695Q8IW36 515 aa13.68□□□□□ -0.22
TPM1-214ENST00000558544 SELENOHQ8IZQ5 122 aaKnown RBP13.68□□□□□ -0.22
TPM1-214ENST00000558544 RNASE11Q8TAA1 199 aaKnown RBP13.68□□□□□ -0.22
TPM1-214ENST00000558544 RBPMSQ93062 196 aaKnown RBP13.68□□□□□ -0.22
TPM1-214ENST00000558544 TRAV6A0A075B6T7 132 aa13.67□□□□□ -0.22
TPM1-214ENST00000558544 A0A0G2JRQ6 117 aa13.67□□□□□ -0.22
TPM1-214ENST00000558544 MSGN1A6NI15 193 aa13.67□□□□□ -0.22
TPM1-214ENST00000558544 E7EUB6 86 aa13.67□□□□□ -0.22
TPM1-214ENST00000558544 SNAPC5O75971 98 aa13.67□□□□□ -0.22
TPM1-214ENST00000558544 ATG12O94817 140 aa13.67□□□□□ -0.22
TPM1-214ENST00000558544 IZUMO4Q1ZYL8 232 aa13.67□□□□□ -0.22
TPM1-214ENST00000558544 TCTEX1D4Q5JR98 221 aa13.67□□□□□ -0.22
TPM1-214ENST00000558544 ASPHD1Q5U4P2 390 aa13.67□□□□□ -0.22
TPM1-214ENST00000558544 LCNL1Q6ZST4 164 aa13.67□□□□□ -0.22
TPM1-214ENST00000558544 CADM3Q8N126 398 aa13.67□□□□□ -0.22
TPM1-214ENST00000558544 TMEM56Q96MV1 263 aa13.67□□□□□ -0.22
TPM1-214ENST00000558544 FYTTD1Q96QD9 318 aaKnown RBP13.67□□□□□ -0.22
TPM1-214ENST00000558544 CITED2Q99967 270 aaPredicted RBP13.67□□□□□ -0.22
TPM1-214ENST00000558544 NUDT15Q9NV35 164 aa13.67□□□□□ -0.22
TPM1-214ENST00000558544 TMEM56-RWDD3S4R434 201 aa13.67□□□□□ -0.22
TPM1-214ENST00000558544 SFT2D2O95562 160 aa13.66□□□□□ -0.22
TPM1-214ENST00000558544 P0C879 139 aa13.66□□□□□ -0.22
TPM1-214ENST00000558544 UBE2MP61081 183 aaKnown RBP13.66□□□□□ -0.22
TPM1-214ENST00000558544 AKIRIN2Q53H80 203 aa13.66□□□□□ -0.22
TPM1-214ENST00000558544 TEX38Q6PEX7 206 aa13.66□□□□□ -0.22
TPM1-214ENST00000558544 CASTOR1Q8WTX7 329 aa13.66□□□□□ -0.22
TPM1-214ENST00000558544 RRNAD1Q96FB5 475 aaKnown RBP13.66□□□□□ -0.22
TPM1-214ENST00000558544 COMMD5Q9GZQ3 224 aa13.66□□□□□ -0.22
TPM1-214ENST00000558544 FOXA2Q9Y261 457 aaPredicted RBP13.66□□□□□ -0.22
TPM1-214ENST00000558544 A0A1B0GW64 132 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 HMX3A6NHT5 357 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 CGB1A6NKQ9 187 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 DBX1A6NMT0 343 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 C15orf61A6NNL5 157 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 TEX22C9J3V5 150 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 SOX15O60248 233 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 IGHG4P01861 327 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 HLA-AP01891 365 aaKnown RBP13.65□□□□□ -0.22
TPM1-214ENST00000558544 OR4E1P0C645 316 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 KHDC1LQ5JSQ8 128 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 PLET1Q6UQ28 207 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 COMMD1Q8N668 190 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 SLC35G3Q8N808 338 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 OR4A16Q8NH70 328 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 IL22RA2Q969J5 263 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 SPIN2AQ99865 258 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 SPIN2BQ9BPZ2 258 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 PRNDQ9UKY0 176 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 OR51B2Q9Y5P1 312 aa13.65□□□□□ -0.22
TPM1-214ENST00000558544 TRRAPQ9Y4A5 3859 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 A0A0B4J293 547 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 TCRBV4S1A1TA0A5B7 111 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 C9orf170A2RU37 121 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 IGLV1-40P01703 118 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 FGF2P09038 288 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 SRPXP78539 464 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 CD83Q01151 205 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 FOXE3Q13461 319 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 ANKRD55Q3KP44 614 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 C4orf46Q504U0 113 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 LGI3Q8N145 548 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 OR5T1Q8NG75 326 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 MARVELD1Q9BSK0 173 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 TMEM14BQ9NUH8 114 aa13.64□□□□□ -0.23
TPM1-214ENST00000558544 TEX50A0A1B0GTY4 177 aa13.63□□□□□ -0.23
TPM1-214ENST00000558544 RBMXL2O75526 392 aaKnown RBP13.63□□□□□ -0.23
TPM1-214ENST00000558544 RPLP1P05386 114 aaKnown RBP13.63□□□□□ -0.23
TPM1-214ENST00000558544 ELANEP08246 267 aa13.63□□□□□ -0.23
TPM1-214ENST00000558544 H2AFB2P0C5Z0 115 aa13.63□□□□□ -0.23
TPM1-214ENST00000558544 PF4V1P10720 104 aa13.63□□□□□ -0.23
TPM1-214ENST00000558544 PSMB8P28062 276 aa13.63□□□□□ -0.23
TPM1-214ENST00000558544 DHRS2Q13268 280 aa13.63□□□□□ -0.23
TPM1-214ENST00000558544 NSUN5P1Q3KNT7 163 aa13.63□□□□□ -0.23
TPM1-214ENST00000558544 CXorf66Q5JRM2 361 aaPredicted RBP13.63□□□□□ -0.23
TPM1-214ENST00000558544 LYZL2Q7Z4W2 148 aa13.63□□□□□ -0.23
TPM1-214ENST00000558544 LYG2Q86SG7 212 aa13.63□□□□□ -0.23
TPM1-214ENST00000558544 OR5M8Q8NGP6 311 aa13.63□□□□□ -0.23
TPM1-214ENST00000558544 TMEM68Q96MH6 324 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms