RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 FBN3Q75N90 2809 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 A0A0G2JLM5 398 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 DUXBA0A1W2PPF3 345 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 MSGN1A6NI15 193 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 CYB5BO43169 146 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 RPL27AP46776 148 aaKnown RBP10.72□□□□□ -0.69
SHMT2-234ENST00000557703 RAB9AP51151 201 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 GNB1P62873 340 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 TRIM16LQ309B1 348 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 MZT2BQ6NZ67 158 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 SSX9Q7RTT3 188 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 ZNF429Q86V71 674 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 VKORC1L1Q8N0U8 176 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 TTC9CQ8N5M4 171 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 OR1L8Q8NGR8 309 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 GRPEL2Q8TAA5 225 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 MYOZ3Q8TDC0 251 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 RBPMSQ93062 196 aaKnown RBP10.72□□□□□ -0.69
SHMT2-234ENST00000557703 RRNAD1Q96FB5 475 aaKnown RBP10.72□□□□□ -0.69
SHMT2-234ENST00000557703 TP53RKQ96S44 253 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 PHB2Q99623 299 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 CITED2Q99967 270 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-234ENST00000557703 ALX4Q9H161 411 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-234ENST00000557703 LINC00527Q9UJ94 153 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 VSIG4Q9Y279 399 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 WSB1Q9Y6I7 421 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 MGAM2Q2M2H8 2515 aa10.72□□□□□ -0.69
SHMT2-234ENST00000557703 NPIPB5A8MRT5 1133 aa10.71□□□□□ -0.69
SHMT2-234ENST00000557703 G3V318 75 aa10.71□□□□□ -0.69
SHMT2-234ENST00000557703 LYRM1O43325 122 aa10.71□□□□□ -0.69
SHMT2-234ENST00000557703 OR9G9P0C7N8 305 aa10.71□□□□□ -0.69
SHMT2-234ENST00000557703 G6PCP35575 357 aa10.71□□□□□ -0.69
SHMT2-234ENST00000557703 RPL23AP62750 156 aaKnown RBP10.71□□□□□ -0.69
SHMT2-234ENST00000557703 RUNX1Q01196 453 aa10.71□□□□□ -0.69
SHMT2-234ENST00000557703 ECSCRQ19T08 205 aa10.71□□□□□ -0.69
SHMT2-234ENST00000557703 KLK9Q2XQG4 91 aa10.71□□□□□ -0.69
SHMT2-234ENST00000557703 TCTEX1D4Q5JR98 221 aa10.71□□□□□ -0.69
SHMT2-234ENST00000557703 CENPSQ8N2Z9 138 aa10.71□□□□□ -0.69
SHMT2-234ENST00000557703 FAM110DQ8TAY7 271 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-234ENST00000557703 LSM10Q969L4 123 aaKnown RBP10.71□□□□□ -0.69
SHMT2-234ENST00000557703 RBMXL1Q96E39 390 aaKnown RBP10.71□□□□□ -0.69
SHMT2-234ENST00000557703 USMG5Q96IX5 58 aa10.71□□□□□ -0.69
SHMT2-234ENST00000557703 QTRT1Q9BXR0 403 aaKnown RBP10.71□□□□□ -0.69
SHMT2-234ENST00000557703 TMEM14BQ9NUH8 114 aa10.71□□□□□ -0.69
SHMT2-234ENST00000557703 KLK9Q9UKQ9 250 aa10.71□□□□□ -0.69
SHMT2-234ENST00000557703 FBXO7Q9Y3I1 522 aa10.71□□□□□ -0.69
SHMT2-234ENST00000557703 A0A0B4J2A0 478 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 A0A1W2PN81 502 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 C15orf61A6NNL5 157 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 UPK1BO75841 260 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 OR5AC1P0C628 307 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 AKR1C4P17516 323 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 CHRNA7P36544 502 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 AKR1C2P52895 323 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 RAB25P57735 213 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 SRSF4Q08170 494 aaKnown RBP10.7□□□□□ -0.7
SHMT2-234ENST00000557703 ASAH1Q13510 395 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 ZNF695Q8IW36 515 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 LGI3Q8N145 548 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 LRTM2Q8N967 370 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 OR1L6Q8NGR2 347 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 OR4A16Q8NH70 328 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 SHPKQ9UHJ6 478 aa10.7□□□□□ -0.7
SHMT2-234ENST00000557703 PLA2G10O15496 165 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 IGKV1-39P01597 117 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 IGKV1D-39P04432 117 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 CRYGCP07315 174 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 P0C879 139 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 TRAPPC2P0DI81 140 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 TRAPPC2BP0DI82 140 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 PF4V1P10720 104 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 HIST1H1BP16401 226 aaKnown RBP10.69□□□□□ -0.7
SHMT2-234ENST00000557703 OR2B8PP59922 312 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 TMEM187Q14656 261 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 AARDQ4LEZ3 155 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 ZNF491Q8N8L2 437 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 ADAD2Q8NCV1 583 aaKnown RBP10.69□□□□□ -0.7
SHMT2-234ENST00000557703 C4orf3Q8WVX3 66 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 TMEM230Q96A57 120 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 FAM103A1Q9BTL3 118 aaKnown RBP10.69□□□□□ -0.7
SHMT2-234ENST00000557703 NDUFA4L2Q9NRX3 87 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 COA4Q9NYJ1 87 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 TRRAPQ9Y4A5 3859 aa10.69□□□□□ -0.7
SHMT2-234ENST00000557703 FAM223BA6NKX1 122 aa10.68□□□□□ -0.7
SHMT2-234ENST00000557703 ADARB2-AS1A8MUL3 147 aa10.68□□□□□ -0.7
SHMT2-234ENST00000557703 INS-IGF2F8WCM5 200 aa10.68□□□□□ -0.7
SHMT2-234ENST00000557703 SLC25A6P12236 298 aa10.68□□□□□ -0.7
SHMT2-234ENST00000557703 DEFA1P59665 94 aa10.68□□□□□ -0.7
SHMT2-234ENST00000557703 DEFA3P59666 94 aa10.68□□□□□ -0.7
SHMT2-234ENST00000557703 HSPE1P61604 102 aaKnown RBP10.68□□□□□ -0.7
SHMT2-234ENST00000557703 SUPT4H1P63272 117 aaKnown RBP10.68□□□□□ -0.7
SHMT2-234ENST00000557703 SP6Q3SY56 376 aa10.68□□□□□ -0.7
SHMT2-234ENST00000557703 TMED4Q7Z7H5 227 aa10.68□□□□□ -0.7
SHMT2-234ENST00000557703 FAM223AQ8IWN6 122 aa10.68□□□□□ -0.7
SHMT2-234ENST00000557703 C11orf44Q8N8P7 122 aa10.68□□□□□ -0.7
SHMT2-234ENST00000557703 OR52E5Q8NH55 327 aa10.68□□□□□ -0.7
SHMT2-234ENST00000557703 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-234ENST00000557703 THYN1Q9P016 225 aa10.68□□□□□ -0.7
SHMT2-234ENST00000557703 OR51B2Q9Y5P1 312 aa10.68□□□□□ -0.7
SHMT2-234ENST00000557703 TRBV9A0A0B4J1U6 114 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms