RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 AWAT1Q58HT5 328 aa12.03□□□□□ -0.48
NEDD1-213ENST00000557644 FOXRED2Q8IWF2 684 aa12.03□□□□□ -0.48
NEDD1-213ENST00000557644 MMP24Q9Y5R2 645 aa12.03□□□□□ -0.48
NEDD1-213ENST00000557644 A0A0B4J2A0 478 aa12.02□□□□□ -0.49
NEDD1-213ENST00000557644 A0A1B0GW64 132 aa12.02□□□□□ -0.49
NEDD1-213ENST00000557644 AP4M1O00189 453 aa12.02□□□□□ -0.49
NEDD1-213ENST00000557644 PROK1P58294 105 aa12.02□□□□□ -0.49
NEDD1-213ENST00000557644 SRPXP78539 464 aa12.02□□□□□ -0.49
NEDD1-213ENST00000557644 HIST2H2BDQ6DRA6 164 aa12.02□□□□□ -0.49
NEDD1-213ENST00000557644 ZNF329Q86UD4 541 aa12.02□□□□□ -0.49
NEDD1-213ENST00000557644 STPG2Q8N412 459 aa12.02□□□□□ -0.49
NEDD1-213ENST00000557644 LRTM2Q8N967 370 aa12.02□□□□□ -0.49
NEDD1-213ENST00000557644 SRSF12Q8WXF0 261 aaKnown RBP12.02□□□□□ -0.49
NEDD1-213ENST00000557644 GPR146Q96CH1 333 aa12.02□□□□□ -0.49
NEDD1-213ENST00000557644 SHPKQ9UHJ6 478 aa12.02□□□□□ -0.49
NEDD1-213ENST00000557644 STAB1Q9NY15 2570 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 MSGN1A6NI15 193 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 CREBL2O60519 120 aaPredicted RBP12.01□□□□□ -0.49
NEDD1-213ENST00000557644 SNAPC5O75971 98 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 ATG12O94817 140 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 IGF1P05019 195 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 ECSCRQ19T08 205 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 KLHDC1Q8N7A1 406 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 LFNGQ8NES3 379 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 MITD1Q8WV92 249 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 WNT10AQ9GZT5 417 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 CGB1A6NKQ9 187 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 C15orf61A6NNL5 157 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 ADAP1O75689 374 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 HOXB5P09067 269 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 VDAC1P21796 283 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 NMSQ5H8A3 153 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 CADM3Q8N126 398 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 OR4A16Q8NH70 328 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 SGMS2Q8NHU3 365 aa12.01□□□□□ -0.49
NEDD1-213ENST00000557644 ZNF431Q8TF32 576 aaPredicted RBP12.01□□□□□ -0.49
NEDD1-213ENST00000557644 HMX3A6NHT5 357 aa12□□□□□ -0.49
NEDD1-213ENST00000557644 RBMXL2O75526 392 aaKnown RBP12□□□□□ -0.49
NEDD1-213ENST00000557644 COQ8AQ8NI60 647 aa12□□□□□ -0.49
NEDD1-213ENST00000557644 LSM10Q969L4 123 aaKnown RBP12□□□□□ -0.49
NEDD1-213ENST00000557644 FYTTD1Q96QD9 318 aaKnown RBP12□□□□□ -0.49
NEDD1-213ENST00000557644 QTRT1Q9BXR0 403 aaKnown RBP12□□□□□ -0.49
NEDD1-213ENST00000557644 COMMD5Q9GZQ3 224 aa12□□□□□ -0.49
NEDD1-213ENST00000557644 TMEM14BQ9NUH8 114 aa12□□□□□ -0.49
NEDD1-213ENST00000557644 CACNG5Q9UF02 275 aa12□□□□□ -0.49
NEDD1-213ENST00000557644 OR51B2Q9Y5P1 312 aa12□□□□□ -0.49
NEDD1-213ENST00000557644 TEX50A0A1B0GTY4 177 aa12□□□□□ -0.49
NEDD1-213ENST00000557644 MPTX1A8MV57 137 aa12□□□□□ -0.49
NEDD1-213ENST00000557644 IL5P05113 134 aa12□□□□□ -0.49
NEDD1-213ENST00000557644 MAS1LP35410 378 aa12□□□□□ -0.49
NEDD1-213ENST00000557644 RPL27AP46776 148 aaKnown RBP12□□□□□ -0.49
NEDD1-213ENST00000557644 SRSF4Q08170 494 aaKnown RBP12□□□□□ -0.49
NEDD1-213ENST00000557644 ASPHD1Q5U4P2 390 aa12□□□□□ -0.49
NEDD1-213ENST00000557644 CENPVQ7Z7K6 275 aaPredicted RBP12□□□□□ -0.49
NEDD1-213ENST00000557644 UXS1Q8NBZ7 420 aa12□□□□□ -0.49
NEDD1-213ENST00000557644 PHB2Q99623 299 aa12□□□□□ -0.49
NEDD1-213ENST00000557644 TRAV41A0A0B4J266 112 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 KRTAP10-3P60369 221 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 OXA1LQ15070 435 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 GGNBP1Q5YKI7 109 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 FAM219AQ8IW50 185 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 C11orf44Q8N8P7 122 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 PRNDQ9UKY0 176 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 A0A1B0GUS0 222 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 TEX22C9J3V5 150 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 NXPH3O95157 252 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 C19orf54Q5BKX5 351 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 SPINK9Q5DT21 86 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 UNQ5815/PRO19632Q6UWF5 114 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 OR10W1Q8NGF6 305 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 WIPF2Q8TF74 440 aaPredicted RBP11.99□□□□□ -0.49
NEDD1-213ENST00000557644 CHPT1Q8WUD6 406 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 HINT2Q9BX68 163 aa11.99□□□□□ -0.49
NEDD1-213ENST00000557644 FOXA2Q9Y261 457 aaPredicted RBP11.99□□□□□ -0.49
NEDD1-213ENST00000557644 TET2Q6N021 2002 aaPredicted RBP11.99□□□□□ -0.49
NEDD1-213ENST00000557644 PSMB11A5LHX3 300 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 ST8SIA3O43173 380 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 SOX15O60248 233 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 DHFRP00374 187 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 CRIP2P52943 208 aaPredicted RBP11.98□□□□□ -0.49
NEDD1-213ENST00000557644 CFHR3Q02985 330 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 TATDN3Q17R31 274 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 DUXBA0A1W2PPF3 345 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 FGF2P09038 288 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 AREGP15514 252 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 PPIFP30405 207 aaKnown RBP11.98□□□□□ -0.49
NEDD1-213ENST00000557644 AKIRIN2Q53H80 203 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 C19orf35Q6ZS72 473 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 C12orf45Q8N5I9 185 aaPredicted RBP11.98□□□□□ -0.49
NEDD1-213ENST00000557644 OR5T1Q8NG75 326 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 WFDC12Q8WWY7 111 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 SPIN2AQ99865 258 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 SPIN2BQ9BPZ2 258 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 NDUFA4L2Q9NRX3 87 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 TMED3Q9Y3Q3 217 aa11.98□□□□□ -0.49
NEDD1-213ENST00000557644 A0A1W2PN81 502 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 CCSO14618 274 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 PRAF2O60831 178 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 CHRNA7P36544 502 aa11.97□□□□□ -0.49
NEDD1-213ENST00000557644 LCNL1Q6ZST4 164 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms