RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 HSD52Q0P140 79 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 Q0VG73 95 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 UNC119Q13432 240 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 PEA15Q15121 130 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 IL17AQ16552 155 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 CLEC12BQ2HXU8 276 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 CT45A1Q5HYN5 189 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 TBPL2Q6SJ96 375 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 ACOT1Q86TX2 421 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 GKN2Q86XP6 184 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 LINC01561Q8N1V8 128 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 TTC9CQ8N5M4 171 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 TCTEX1D1Q8N7M0 179 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 LINC00301Q8NCQ3 95 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 OR6K6Q8NGW6 343 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 CT45A3Q8NHU0 189 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 PLEKHB2Q96CS7 222 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 TBX15Q96SF7 602 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 HSPB9Q9BQS6 159 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 RTBDNQ9BSG5 229 aaPredicted RBP1.18□□□□□ -2.22
HIF1A-212ENST00000557538 WDR61Q9GZS3 305 aaKnown RBP1.18□□□□□ -2.22
HIF1A-212ENST00000557538 RNASE7Q9H1E1 156 aaKnown RBP1.18□□□□□ -2.22
HIF1A-212ENST00000557538 Q9H521 79 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 TAF9BQ9HBM6 251 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 DNAJC27Q9NZQ0 273 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 VSIG4Q9Y279 399 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 VWA8A3KMH1 1905 aa1.18□□□□□ -2.22
HIF1A-212ENST00000557538 TRIP11Q15643 1979 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 PAPPAQ13219 1627 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 IGHV1-69-2A0A0G2JMI3 117 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 ZFP92A6NM28 416 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 CEACAM18A8MTB9 384 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 MFNGO00587 321 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SSNA1O43805 119 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 ENTPD6O75354 484 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 TNFP01375 233 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SLC2A5P22732 501 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 BTCP35070 178 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 HRH1P35367 487 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 CA7P43166 264 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SSR4P51571 173 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 ARPP19P56211 112 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 TCTAP57738 103 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 LCN6P62502 163 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SLC38A11Q08AI6 406 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SMAGPQ0VAQ4 97 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 IAH1Q2TAA2 248 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-212ENST00000557538 CNIH2Q6PI25 160 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 Q6Q795 121 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 ALKAL2Q6UX46 152 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM14EPQ6UXP3 125 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SSX6Q7RTT6 188 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 TMEM183AQ8IXX5 376 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SAXO1Q8IYX7 474 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 MUC15Q8N387 334 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 RNF175Q8N4F7 328 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 NPWQ8N729 165 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 TPRX1Q8N7U7 411 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 OR1S2Q8NGQ3 325 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 ACER1Q8TDN7 264 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SLC37A2Q8TED4 501 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 TSLPQ969D9 159 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 APH1AQ96BI3 265 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 NEURL3Q96EH8 262 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 BTF3L4Q96K17 158 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 MRPL32Q9BYC8 188 aaKnown RBP1.17□□□□□ -2.22
HIF1A-212ENST00000557538 GTSF1LQ9H1H1 148 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SMCO4Q9NRQ5 59 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SPANXCQ9NY87 97 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 COMMD3Q9UBI1 195 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SLC2A6Q9UGQ3 507 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 C14orf166Q9Y224 244 aaKnown RBP1.17□□□□□ -2.22
HIF1A-212ENST00000557538 LTBP2Q14767 1821 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 PATJQ8NI35 1801 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 MED1Q15648 1581 aaPredicted RBP1.17□□□□□ -2.22
HIF1A-212ENST00000557538 STRCP1A6NGW2 1772 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 BPTFQ12830 3046 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 NEXMIFQ5QGS0 1516 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 IGHV1OR21-1A0A087WYE8 117 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 IGHV2-26A0A0B4J1V2 119 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 MAP1LC3B2A6NCE7 125 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 C9JAW5 83 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 HSD17B6O14756 317 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 MYL12BO14950 172 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 NPIPB7O75200 414 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 CLDN11O75508 207 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 REM1O75628 298 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 OR2A4O95047 310 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 UCHL1P09936 223 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 OR5G3P0C626 314 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 MYL12AP19105 171 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 MYL9P24844 172 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF83P51522 516 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 CRISP3P54108 245 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 SLC25A35Q3KQZ1 300 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 Q6AWC8 147 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 AMMECR1LQ6DCA0 310 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 KRTAP5-1Q6L8H4 278 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 RASSF6Q6ZTQ3 369 aa1.17□□□□□ -2.22
HIF1A-212ENST00000557538 ZNF720Q7Z2F6 126 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms