RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 PDCD1LG2Q9BQ51 273 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 CST11Q9H112 138 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 FBXL15Q9H469 300 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 BIN3Q9NQY0 253 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 GSN-AS1Q9NRJ2 163 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 SLC2A8Q9NY64 477 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 GAGE2DQ9UEU5 116 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 OAZ3Q9UMX2 235 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 NUBP2Q9Y5Y2 271 aa4.44□□□□□ -1.7
VPS33B-207ENST00000557470 IZUMO1RA6ND01 250 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 METTL21EPA6NDL7 271 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 TMEM212A6NML5 194 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 H0Y980 276 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 FCN1O00602 326 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 CHEK1O14757 476 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 ARPC1BO15143 372 aaKnown RBP4.43□□□□□ -1.7
VPS33B-207ENST00000557470 NDUFB4O95168 129 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 BRI3O95415 125 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 NPSP0C0P6 89 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 RCC1P18754 421 aaPredicted RBP4.43□□□□□ -1.7
VPS33B-207ENST00000557470 SERPINA2P20848 420 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 ZP3P21754 424 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 DCKP27707 260 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 PPP1CCP36873 323 aaKnown RBP4.43□□□□□ -1.7
VPS33B-207ENST00000557470 TAS2R60P59551 318 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 ADARB1P78563 741 aaKnown RBP4.43□□□□□ -1.7
VPS33B-207ENST00000557470 PLA2G7Q13093 441 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 KLF5Q13887 457 aaPredicted RBP4.43□□□□□ -1.7
VPS33B-207ENST00000557470 TMEM30BQ3MIR4 351 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 HSD17B12Q53GQ0 312 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 ACTBL2Q562R1 376 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 RNASE12Q5GAN4 147 aaKnown RBP4.43□□□□□ -1.7
VPS33B-207ENST00000557470 SYT6Q5T7P8 510 aaPredicted RBP4.43□□□□□ -1.7
VPS33B-207ENST00000557470 RNLSQ5VYX0 342 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 ZFP1Q6P2D0 407 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 CD200R1LQ6Q8B3 271 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 UNQ5815/PRO19632Q6UWF5 114 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 LINC00322Q6ZN03 302 aaPredicted RBP4.43□□□□□ -1.7
VPS33B-207ENST00000557470 LINC00596Q86U02 117 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 PPP1R27Q86WC6 154 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 STX19Q8N4C7 294 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 OR9G4Q8NGQ1 327 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 OR4K15Q8NH41 348 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 GLYATL2Q8WU03 294 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 DDB2Q92466 427 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 CYYR1Q96J86 154 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 RDH12Q96NR8 316 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 FAM103A1Q9BTL3 118 aaKnown RBP4.43□□□□□ -1.7
VPS33B-207ENST00000557470 MND1Q9BWT6 205 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 YTHDF1Q9BYJ9 559 aaKnown RBP4.43□□□□□ -1.7
VPS33B-207ENST00000557470 GABARAPL1Q9H0R8 117 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 METTL9Q9H1A3 318 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 OR51M1Q9H341 326 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 GEMIN7Q9H840 131 aaKnown RBP4.43□□□□□ -1.7
VPS33B-207ENST00000557470 PLEKHA3Q9HB20 300 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 OR2S2Q9NQN1 319 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 PLCXD1Q9NUJ7 323 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 TAS2R4Q9NYW5 299 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 IL36GQ9NZH8 169 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 TRAPPC2LQ9UL33 140 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 ING4Q9UNL4 249 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 KIAA1109Q2LD37 5005 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 KMT2AQ03164 3969 aa4.43□□□□□ -1.7
VPS33B-207ENST00000557470 HECTD4Q9Y4D8 3996 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 SAA2-SAA4A0A096LPE2 208 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 TRAV25A0A0B4J276 109 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 A0A1W2PP11 408 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 C9orf118A6NHY6 69 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 LINC00587B1AMM8 73 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 G3V2T6 193 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 RRHO14718 337 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 MBP02144 154 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 TRGV3P03979 118 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 GNAO1P09471 354 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 SAA2P0DJI9 122 aaPredicted RBP4.42□□□□□ -1.7
VPS33B-207ENST00000557470 CD40LGP29965 261 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 SOX2P48431 317 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 SYNJ2BPP57105 145 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 DEFA1P59665 94 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 DEFA3P59666 94 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 SEC61GP60059 68 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 HERV-K104P63124 156 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 TMEM267Q0VDI3 215 aaPredicted RBP4.42□□□□□ -1.7
VPS33B-207ENST00000557470 PJVKQ0ZLH3 352 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 PLGLAQ15195 96 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 P2RY14Q15391 338 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 ATP6AP1Q15904 470 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 MPV17LQ2QL34 196 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 SLC22A6Q4U2R8 563 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 MORN2Q502X0 79 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 AKIRIN2Q53H80 203 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 OGFRL1Q5TC84 451 aaPredicted RBP4.42□□□□□ -1.7
VPS33B-207ENST00000557470 UBE2UQ5VVX9 321 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 LIPKQ5VXJ0 399 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 LCN12Q6JVE5 192 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 FAM131AQ6UXB0 335 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 ZNF833PQ6ZTB9 187 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 C5orf24Q7Z6I8 188 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 AMIGO2Q86SJ2 522 aa4.42□□□□□ -1.7
VPS33B-207ENST00000557470 RPP25LQ8N5L8 163 aaKnown RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms