RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 REC114Q7Z4M0 266 aa16.54■□□□□ 0.24
FOXA1-205ENST00000557418 OR52B4Q8NGK2 314 aa16.54■□□□□ 0.24
FOXA1-205ENST00000557418 RHOVQ96L33 236 aa16.54■□□□□ 0.24
FOXA1-205ENST00000557418 SEC22CQ9BRL7 303 aa16.54■□□□□ 0.24
FOXA1-205ENST00000557418 FBXL15Q9H469 300 aa16.54■□□□□ 0.24
FOXA1-205ENST00000557418 METTL1Q9UBP6 276 aaKnown RBP16.54■□□□□ 0.24
FOXA1-205ENST00000557418 NUDT19A8MXV4 375 aa16.53■□□□□ 0.24
FOXA1-205ENST00000557418 DUS4LO95620 317 aaKnown RBP16.53■□□□□ 0.24
FOXA1-205ENST00000557418 IGKV1-5P01602 117 aa16.53■□□□□ 0.24
FOXA1-205ENST00000557418 ANXA3P12429 323 aa16.53■□□□□ 0.24
FOXA1-205ENST00000557418 G6PCP35575 357 aa16.53■□□□□ 0.24
FOXA1-205ENST00000557418 CADM3Q8N126 398 aa16.53■□□□□ 0.24
FOXA1-205ENST00000557418 LRTM2Q8N967 370 aa16.53■□□□□ 0.24
FOXA1-205ENST00000557418 TEX45Q8NA69 505 aa16.53■□□□□ 0.24
FOXA1-205ENST00000557418 CASTOR1Q8WTX7 329 aa16.53■□□□□ 0.24
FOXA1-205ENST00000557418 RBPMSQ93062 196 aaKnown RBP16.53■□□□□ 0.24
FOXA1-205ENST00000557418 IL22RA2Q969J5 263 aa16.53■□□□□ 0.24
FOXA1-205ENST00000557418 MARCH11A6NNE9 402 aa16.52■□□□□ 0.24
FOXA1-205ENST00000557418 KRASP01116 189 aa16.52■□□□□ 0.24
FOXA1-205ENST00000557418 VMA21Q3ZAQ7 101 aa16.52■□□□□ 0.24
FOXA1-205ENST00000557418 OR4A47Q6IF82 309 aa16.52■□□□□ 0.24
FOXA1-205ENST00000557418 SSX9Q7RTT3 188 aa16.52■□□□□ 0.24
FOXA1-205ENST00000557418 AIFM2Q9BRQ8 373 aa16.52■□□□□ 0.24
FOXA1-205ENST00000557418 BET1LQ9NYM9 111 aa16.52■□□□□ 0.24
FOXA1-205ENST00000557418 KIAA1456Q9P272 454 aa16.52■□□□□ 0.24
FOXA1-205ENST00000557418 PRKDCP78527 4128 aaKnown RBP16.52■□□□□ 0.23
FOXA1-205ENST00000557418 A0A0B4J293 547 aa16.51■□□□□ 0.23
FOXA1-205ENST00000557418 FCN1O00602 326 aa16.51■□□□□ 0.23
FOXA1-205ENST00000557418 OR2A4O95047 310 aa16.51■□□□□ 0.23
FOXA1-205ENST00000557418 SRPXP78539 464 aa16.51■□□□□ 0.23
FOXA1-205ENST00000557418 TMEM268Q5VZI3 342 aa16.51■□□□□ 0.23
FOXA1-205ENST00000557418 LGI3Q8N145 548 aa16.51■□□□□ 0.23
FOXA1-205ENST00000557418 ZNF431Q8TF32 576 aaPredicted RBP16.51■□□□□ 0.23
FOXA1-205ENST00000557418 MITD1Q8WV92 249 aa16.51■□□□□ 0.23
FOXA1-205ENST00000557418 RCC1LQ96I51 464 aaKnown RBP16.51■□□□□ 0.23
FOXA1-205ENST00000557418 OR2A7Q96R45 310 aa16.51■□□□□ 0.23
FOXA1-205ENST00000557418 HSPB9Q9BQS6 159 aa16.51■□□□□ 0.23
FOXA1-205ENST00000557418 TMEM140Q9NV12 185 aa16.51■□□□□ 0.23
FOXA1-205ENST00000557418 TRAV3A0A0B4J244 114 aa16.5■□□□□ 0.23
FOXA1-205ENST00000557418 A0A0G2JRQ6 117 aa16.5■□□□□ 0.23
FOXA1-205ENST00000557418 PRAF2O60831 178 aa16.5■□□□□ 0.23
FOXA1-205ENST00000557418 HLA-DRB1P01911 266 aa16.5■□□□□ 0.23
FOXA1-205ENST00000557418 VDAC1P21796 283 aa16.5■□□□□ 0.23
FOXA1-205ENST00000557418 CXorf66Q5JRM2 361 aaPredicted RBP16.5■□□□□ 0.23
FOXA1-205ENST00000557418 C18orf65Q6ZTR6 163 aa16.5■□□□□ 0.23
FOXA1-205ENST00000557418 C8orf86Q6ZUL3 223 aa16.5■□□□□ 0.23
FOXA1-205ENST00000557418 PPP1R27Q86WC6 154 aa16.5■□□□□ 0.23
FOXA1-205ENST00000557418 ZNF695Q8IW36 515 aa16.5■□□□□ 0.23
FOXA1-205ENST00000557418 SLC35G3Q8N808 338 aa16.5■□□□□ 0.23
FOXA1-205ENST00000557418 KLHL30-AS1Q8NEE0 82 aa16.5■□□□□ 0.23
FOXA1-205ENST00000557418 DMBX1Q8NFW5 382 aa16.5■□□□□ 0.23
FOXA1-205ENST00000557418 TMEM167AQ8TBQ9 72 aa16.5■□□□□ 0.23
FOXA1-205ENST00000557418 A0A0B4J2A0 478 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 UPK2O00526 184 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 KBTBD11O94819 623 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 DHFRP00374 187 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 OR9G9P0C7N8 305 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 MYCNOSP40205 109 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 ERVK-16P61578 105 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 SSBP2P81877 361 aaPredicted RBP16.49■□□□□ 0.23
FOXA1-205ENST00000557418 PJVKQ0ZLH3 352 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 PRSS8Q16651 343 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 LIN54Q6MZP7 749 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 LYZL2Q7Z4W2 148 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 MRPL41Q8IXM3 137 aaKnown RBP16.49■□□□□ 0.23
FOXA1-205ENST00000557418 LINC00482Q8N8I6 264 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 MINDY2Q8NBR6 621 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 OR4A5Q8NH83 315 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 VSTM2AQ8TAG5 236 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 SHPKQ9UHJ6 478 aa16.49■□□□□ 0.23
FOXA1-205ENST00000557418 ATG12O94817 140 aa16.48■□□□□ 0.23
FOXA1-205ENST00000557418 IGF1P05019 195 aa16.48■□□□□ 0.23
FOXA1-205ENST00000557418 RPLP1P05386 114 aaKnown RBP16.48■□□□□ 0.23
FOXA1-205ENST00000557418 ELANEP08246 267 aa16.48■□□□□ 0.23
FOXA1-205ENST00000557418 FOXE3Q13461 319 aa16.48■□□□□ 0.23
FOXA1-205ENST00000557418 CLCC1Q96S66 551 aa16.48■□□□□ 0.23
FOXA1-205ENST00000557418 ZNF430Q9H8G1 570 aaPredicted RBP16.48■□□□□ 0.23
FOXA1-205ENST00000557418 IGHV7-81A0A0B4J1V7 117 aa16.47■□□□□ 0.23
FOXA1-205ENST00000557418 DUXBA0A1W2PPF3 345 aa16.47■□□□□ 0.23
FOXA1-205ENST00000557418 C7orf66A4D0T2 115 aa16.47■□□□□ 0.23
FOXA1-205ENST00000557418 DBX1A6NMT0 343 aa16.47■□□□□ 0.23
FOXA1-205ENST00000557418 SNRPGP15A8MWD9 76 aa16.47■□□□□ 0.23
FOXA1-205ENST00000557418 CA2P00918 260 aa16.47■□□□□ 0.23
FOXA1-205ENST00000557418 PLGLAQ15195 96 aa16.47■□□□□ 0.23
FOXA1-205ENST00000557418 TATDN3Q17R31 274 aa16.47■□□□□ 0.23
FOXA1-205ENST00000557418 IZUMO4Q1ZYL8 232 aa16.47■□□□□ 0.23
FOXA1-205ENST00000557418 NMSQ5H8A3 153 aa16.47■□□□□ 0.23
FOXA1-205ENST00000557418 ETV3LQ6ZN32 361 aa16.47■□□□□ 0.23
FOXA1-205ENST00000557418 COQ8AQ8NI60 647 aa16.47■□□□□ 0.23
FOXA1-205ENST00000557418 MRAPQ8TCY5 172 aa16.47■□□□□ 0.23
FOXA1-205ENST00000557418 LSM10Q969L4 123 aaKnown RBP16.47■□□□□ 0.23
FOXA1-205ENST00000557418 GPN1Q9HCN4 374 aaPredicted RBP16.47■□□□□ 0.23
FOXA1-205ENST00000557418 AURKAIP1Q9NWT8 199 aaPredicted RBP16.47■□□□□ 0.23
FOXA1-205ENST00000557418 IGHG4P01861 327 aa16.46■□□□□ 0.23
FOXA1-205ENST00000557418 FGF2P09038 288 aa16.46■□□□□ 0.23
FOXA1-205ENST00000557418 CDX1P47902 265 aaPredicted RBP16.46■□□□□ 0.23
FOXA1-205ENST00000557418 AKR1C2P52895 323 aa16.46■□□□□ 0.23
FOXA1-205ENST00000557418 NDPQ00604 133 aa16.46■□□□□ 0.23
FOXA1-205ENST00000557418 Q6ZRM9 215 aa16.46■□□□□ 0.23
FOXA1-205ENST00000557418 LCNL1Q6ZST4 164 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms