RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 CLDN14O95500 239 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 PLAUP00749 431 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 IGKV1-39P01597 117 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 IGLV3-19P01714 112 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 HLA-DQA1P01909 254 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 CRYAAP02489 173 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 APCSP02743 223 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 IGKV1D-39P04432 117 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 OR10J4P0C629 311 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 LINC00869P0C866 280 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 AREGP15514 252 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 ZNF32P17041 273 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 GABRG2P18507 467 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 CBLN1P23435 193 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 CD1BP29016 333 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 TSPOP30536 169 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 SRD5A2P31213 254 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 CDKN1AP38936 164 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 OPRK1P41145 380 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 IER3P46695 156 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 GABRA2P47869 451 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 ATP5G3P48201 142 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 AMTP48728 403 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 THBS3P49746 956 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 COMPP49747 757 aaPredicted RBP2.38□□□□□ -2.03
SLIRP-208ENST00000556956 HINT1P49773 126 aaPredicted RBP2.38□□□□□ -2.03
SLIRP-208ENST00000556956 CARD18P57730 90 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 SELENOVP59797 346 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 RHOBP62745 196 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 GNG3P63215 75 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 PSG4Q00888 419 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 PLGLB1Q02325 96 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 RAB31Q13636 194 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 IZUMO4Q1ZYL8 232 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 TDRG1Q3Y452 100 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 ZNF585BQ52M93 769 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 PDLIM3Q53GG5 364 aaPredicted RBP2.38□□□□□ -2.03
SLIRP-208ENST00000556956 LRRC10Q5BKY1 277 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 RAET1LQ5VY80 246 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 WDR74Q6RFH5 385 aaPredicted RBP2.38□□□□□ -2.03
SLIRP-208ENST00000556956 RASL11AQ6T310 242 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 COLCA1Q6ZS62 124 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 TCF23Q7RTU1 214 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 H2BFWTQ7Z2G1 175 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 MRPL21Q7Z2W9 205 aaKnown RBP2.38□□□□□ -2.03
SLIRP-208ENST00000556956 MYPOPQ86VE0 399 aaPredicted RBP2.38□□□□□ -2.03
SLIRP-208ENST00000556956 RPS19BP1Q86WX3 136 aaKnown RBP2.38□□□□□ -2.03
SLIRP-208ENST00000556956 MMD2Q8IY49 270 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 LYG1Q8N1E2 194 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 MUC15Q8N387 334 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 ZNF645Q8N7E2 425 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 NRACQ8N912 160 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 Q8N976 141 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 ZIC4Q8N9L1 334 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 WDR31Q8NA23 367 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 ZNF439Q8NDP4 499 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 OR10G3Q8NGC4 313 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 OR4P4Q8NGL7 312 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 APOBEC3DQ96AK3 386 aaPredicted RBP2.38□□□□□ -2.03
SLIRP-208ENST00000556956 SMIM12Q96EX1 92 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 SGCZQ96LD1 299 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 OR6C1Q96RD1 312 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 PMCHL2Q9BQD1 86 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 VPS25Q9BRG1 176 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 ZPBPQ9BS86 351 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 CHRDL1Q9BU40 450 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 SFXN3Q9BWM7 321 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 C1QTNF5Q9BXJ0 243 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 NPCDR1Q9BY65 106 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 PKIBQ9C010 78 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 GNB4Q9HAV0 340 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 SH2D2AQ9NP31 389 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 ZNF331Q9NQX6 463 aaPredicted RBP2.38□□□□□ -2.03
SLIRP-208ENST00000556956 OSTCQ9NRP0 149 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 MTCH1Q9NZJ7 389 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 NAT8BQ9UHF3 227 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 TRAPPC2LQ9UL33 140 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 MMP17Q9ULZ9 603 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 WDR83OSQ9Y284 106 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 CHTOPQ9Y3Y2 248 aaKnown RBP2.38□□□□□ -2.03
SLIRP-208ENST00000556956 MPC1Q9Y5U8 109 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 ARL2-SNX15V9GYD0 113 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 CACNA1IQ9P0X4 2223 aa2.38□□□□□ -2.03
SLIRP-208ENST00000556956 MUC22E2RYF6 1773 aaPredicted RBP2.38□□□□□ -2.03
SLIRP-208ENST00000556956 NUP210LQ5VU65 1888 aa2.37□□□□□ -2.03
SLIRP-208ENST00000556956 MDC1Q14676 2089 aaKnown RBP2.37□□□□□ -2.03
SLIRP-208ENST00000556956 MYO10Q9HD67 2058 aa2.37□□□□□ -2.03
SLIRP-208ENST00000556956 HTTP42858 3142 aa2.37□□□□□ -2.03
SLIRP-208ENST00000556956 IGKV2D-30A0A075B6S6 120 aa2.37□□□□□ -2.03
SLIRP-208ENST00000556956 IGHV1OR21-1A0A087WYE8 117 aa2.37□□□□□ -2.03
SLIRP-208ENST00000556956 IGHV3-15A0A0B4J1V0 119 aa2.37□□□□□ -2.03
SLIRP-208ENST00000556956 TRAV24A0A0B4J272 114 aa2.37□□□□□ -2.03
SLIRP-208ENST00000556956 IGLV5-39A0A0G2JS06 123 aa2.37□□□□□ -2.03
SLIRP-208ENST00000556956 A0A0J9YW62 118 aa2.37□□□□□ -2.03
SLIRP-208ENST00000556956 A0A1B0GUS0 222 aa2.37□□□□□ -2.03
SLIRP-208ENST00000556956 A0A1W2PRS3 328 aa2.37□□□□□ -2.03
SLIRP-208ENST00000556956 IZUMO1RA6ND01 250 aa2.37□□□□□ -2.03
SLIRP-208ENST00000556956 HELTA6NFD8 242 aa2.37□□□□□ -2.03
SLIRP-208ENST00000556956 FAM90A9PA6NNJ1 464 aa2.37□□□□□ -2.03
SLIRP-208ENST00000556956 LMO7DNF2Z398 122 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 236 ms