RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ZNF695Q8IW36 515 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 LGI3Q8N145 548 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 SIGLECL1Q8N7X8 197 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 NANPQ8TBE9 248 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 R3HDM4Q96D70 268 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 MALSU1Q96EH3 234 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 SEC22AQ96IW7 307 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 TMEM56Q96MV1 263 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 DUX5Q96PT3 197 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 CLCC1Q96S66 551 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 SSX3Q99909 188 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 MS4A7Q9GZW8 240 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-244ENST00000556898 GPN1Q9HCN4 374 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-244ENST00000556898 LIN7CQ9NUP9 197 aaKnown RBP4.22□□□□□ -1.73
ATXN3-244ENST00000556898 C11orf21Q9P2W6 132 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 KCNIP3Q9Y2W7 256 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 WASHC3Q9Y3C0 194 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 TMEM56-RWDD3S4R434 201 aa4.22□□□□□ -1.73
ATXN3-244ENST00000556898 MGAM2Q2M2H8 2515 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 A0A0B4J2A0 478 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 C13orf42A0A1B0GVH6 325 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 HMX3A6NHT5 357 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 FAM90A9PA6NNJ1 464 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 H3BUX3 64 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 FCN1O00602 326 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 SLC25A17O43808 307 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 HPRT1P00492 218 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 IGHV4-59P01825 116 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 APOA2P02652 100 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 OPN1MWP04001 364 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 SERPINE2P07093 398 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 P0C879 139 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 SAA1P0DJI8 122 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-244ENST00000556898 OPN1MW2P0DN77 364 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 OPN1MW3P0DN78 364 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 ANXA3P12429 323 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 S100GP29377 79 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 CEACAM3P40198 252 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 H2BFSP57053 126 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 RRAS2P62070 204 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-244ENST00000556898 PJVKQ0ZLH3 352 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 HABP2Q14520 560 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-244ENST00000556898 PSG5Q15238 335 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 Q5BKY6 102 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 SPINK9Q5DT21 86 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 C10orf55Q5SWW7 151 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 OR4A47Q6IF82 309 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 PDPNQ86YL7 162 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 OR8H3Q8N146 312 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 Q8N6K4 173 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 LRTM2Q8N967 370 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 OR4S2Q8NH73 311 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 COQ8AQ8NI60 647 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 FLYWCH2Q96CP2 140 aaKnown RBP4.21□□□□□ -1.74
ATXN3-244ENST00000556898 ADTRPQ96IZ2 230 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 HARBI1Q96MB7 349 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 FYTTD1Q96QD9 318 aaKnown RBP4.21□□□□□ -1.74
ATXN3-244ENST00000556898 PHB2Q99623 299 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 QTRT1Q9BXR0 403 aaKnown RBP4.21□□□□□ -1.74
ATXN3-244ENST00000556898 MED28Q9H204 178 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 FBXL15Q9H469 300 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 PLSCR3Q9NRY6 295 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 TMEM140Q9NV12 185 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 SHPKQ9UHJ6 478 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 PRELID3BQ9Y3B1 194 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 FAM96BQ9Y3D0 163 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 SVEP1Q4LDE5 3571 aa4.21□□□□□ -1.74
ATXN3-244ENST00000556898 C5orf51A6NDU8 294 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 A6NDX4 124 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 LINC01548A6NM66 108 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 OOSP1A8MZH6 123 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 E7EUB6 86 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 UPK2O00526 184 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 RBFOX2O43251 390 aaKnown RBP eCLIP4.2□□□□□ -1.74
ATXN3-244ENST00000556898 HOXA3O43365 443 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-244ENST00000556898 TXNL1O43396 289 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 CHST1O43916 411 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 OR2F2O95006 317 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 SCGB1D2O95969 90 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 MOSP00540 346 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 CRYGBP07316 175 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 IL6RP08887 468 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-244ENST00000556898 FBP1P09467 338 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 NQO2P16083 231 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 TMEM11P17152 192 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 CD1BP29016 333 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 MC5RP33032 325 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 KIR2DS2P43631 304 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 AKR1C2P52895 323 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 HILS1P60008 231 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 SSBP2P81877 361 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-244ENST00000556898 EBI3Q14213 229 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 ODF1Q14990 250 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 RTL8BQ17RB0 113 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 LRRC75BQ2VPJ9 315 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 AWAT1Q58HT5 328 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 NMSQ5H8A3 153 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 CXorf66Q5JRM2 361 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-244ENST00000556898 HIST2H2BDQ6DRA6 164 aa4.2□□□□□ -1.74
ATXN3-244ENST00000556898 C11orf88Q6PI97 169 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms